FI:IV108 Bioinformatics II - Course Information
IV108 Bioinformatics II
Faculty of InformaticsAutumn 2023
- Extent and Intensity
- 1/1/0. 2 credit(s) (plus extra credits for completion). Recommended Type of Completion: zk (examination). Other types of completion: k (colloquium).
- Teacher(s)
- doc. Ing. Matej Lexa, Ph.D. (lecturer)
- Guaranteed by
- doc. Ing. Matej Lexa, Ph.D.
Department of Machine Learning and Data Processing – Faculty of Informatics
Supplier department: Department of Machine Learning and Data Processing – Faculty of Informatics - Timetable
- Wed 12:00–13:50 B116
- Prerequisites
- IV107 Bioinformatics I or consent of the teacher (not needed for biology students).
- Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Image Processing and Analysis (programme FI, N-VIZ)
- Applied Informatics (programme FI, B-AP)
- Applied Informatics (programme FI, N-AP)
- Information Technology Security (eng.) (programme FI, N-IN)
- Information Technology Security (programme FI, N-IN)
- Bioinformatics and systems biology (programme FI, N-UIZD)
- Bioinformatics (programme FI, B-AP)
- Bioinformatics (programme FI, N-AP)
- Computer Games Development (programme FI, N-VIZ_A)
- Computer Graphics and Visualisation (programme FI, N-VIZ_A)
- Computer Networks and Communications (programme FI, N-PSKB_A)
- Cybersecurity Management (programme FI, N-RSSS_A)
- Formal analysis of computer systems (programme FI, N-TEI)
- Graphic design (programme FI, N-VIZ)
- Graphic Design (programme FI, N-VIZ_A)
- Hardware Systems (programme FI, N-PSKB_A)
- Hardware systems (programme FI, N-PSKB)
- Image Processing and Analysis (programme FI, N-VIZ_A)
- Information security (programme FI, N-PSKB)
- Information Systems (programme FI, N-IN)
- Informatics with another discipline (programme FI, B-BI)
- Informatics with another discipline (programme FI, B-EB)
- Informatics with another discipline (programme FI, B-FY)
- Informatics with another discipline (programme FI, B-GE)
- Informatics with another discipline (programme FI, B-GK)
- Informatics with another discipline (programme FI, B-CH)
- Informatics with another discipline (programme FI, B-IO)
- Informatics with another discipline (programme FI, B-MA)
- Informatics with another discipline (programme FI, B-SO)
- Informatics with another discipline (programme FI, B-TV)
- Informatics (eng.) (programme FI, D-IN4)
- Informatics (programme FI, B-IN)
- Informatics (programme FI, B-INF) (2)
- Informatics (programme FI, D-IN)
- Informatics (programme FI, D-IN4)
- Informatics (programme FI, M-IN)
- Informatics (programme FI, N-IN)
- Informatics in education (programme FI, B-IVV) (2)
- Information Security (programme FI, N-PSKB_A)
- Quantum and Other Nonclassical Computational Models (programme FI, N-TEI)
- Mathematical Informatics (programme FI, B-IN)
- Parallel and Distributed Systems (programme FI, B-IN)
- Parallel and Distributed Systems (programme FI, N-IN)
- Computer graphics and visualisation (programme FI, N-VIZ)
- Computer Graphics and Image Processing (programme FI, B-IN)
- Computer Graphics (programme FI, N-IN)
- Computer Networks and Communication (programme FI, B-IN)
- Computer Networks and Communication (programme FI, N-IN)
- Computer Networks and Communications (programme FI, N-PSKB)
- Computer Systems and Technologies (eng.) (programme FI, D-IN4)
- Computer Systems and Technologies (programme FI, D-IN4)
- Computer Systems and Data Processing (programme FI, B-IN)
- Computer Systems (programme FI, N-IN)
- Principles of programming languages (programme FI, N-TEI)
- Programming and development (programme FI, B-PVA)
- Embedded Systems (eng.) (programme FI, N-IN)
- Programmable Technical Structures (programme FI, B-IN)
- Embedded Systems (programme FI, N-IN)
- Cybersecurity management (programme FI, N-RSSS)
- Services development management (programme FI, N-RSSS)
- Software Systems Development Management (programme FI, N-RSSS)
- Services Development Management (programme FI, N-RSSS_A)
- Service Science, Management and Engineering (eng.) (programme FI, N-AP)
- Service Science, Management and Engineering (programme FI, N-AP)
- Social Informatics (programme FI, B-AP)
- Software Systems Development Management (programme FI, N-RSSS_A)
- Software Systems (programme FI, N-PSKB_A)
- Software systems (programme FI, N-PSKB)
- Machine learning and artificial intelligence (programme FI, N-UIZD)
- Theoretical Informatics (programme FI, N-IN)
- Teacher of Informatics and IT administrator (programme FI, N-UCI)
- Informatics for secondary school teachers (programme FI, N-UCI) (2)
- Upper Secondary School Teacher Training in Informatics (programme FI, M-SS)
- Upper Secondary School Teacher Training in Informatics (programme FI, M-TV)
- Upper Secondary School Teacher Training in Informatics (programme FI, N-SS) (2)
- Artificial Intelligence and Natural Language Processing (programme FI, B-IN)
- Artificial Intelligence and Natural Language Processing (programme FI, N-IN)
- Computer Games Development (programme FI, N-VIZ)
- Processing and analysis of large-scale data (programme FI, N-UIZD)
- Image Processing (programme FI, N-AP)
- Natural language processing (programme FI, N-UIZD)
- Course objectives
- Introduction to selected algorithms and methods of analysis used in bioinformatics.
- Learning outcomes
- At the end of the course, the students will:
understand the inner workings of selected algorithms, their advantages and disadvanteges, including knowledge of recent alternatives
be able to work with 3-D models of molecules
be able to evaluate or design methods for solving current problems in bioinformatics
understand the principles of existing DNA sequencing methods and processing sequencing data - Syllabus
- Algorithms for sequence analysis
- Algorithms for prediction and analysis of structural data
- Biological language
- Next-generation DNA sequencing methods and data processing
- Understanding protein cleavage and mass spectra
- Expression profile and promoter analysis
- Literature
- Teaching methods
- lectures and exercises
- Assessment methods
- Bonus exercices, final exam.
- Language of instruction
- Czech
- Follow-Up Courses
- Further Comments
- Study Materials
The course is taught annually. - Teacher's information
- http://www.fi.muni.cz/~lexa/teaching.html
- Enrolment Statistics (Autumn 2023, recent)
- Permalink: https://is.muni.cz/course/fi/autumn2023/IV108