110 trends in plant science Reviews March 2000, Vol. 5, No. 3 1360 - 1385/00/$ – see front matter © 2000 Elsevier Science Ltd. All rights reserved. PII: S1360-1385(00)01569-7 51 Gubler, F. et al. (1995) Gibberellin-regulated expression of a myb gene in barley aleurone cells: evidence for Myb transactivation of a high-pI ␣-amylase gene promoter. Plant Cell 7, 1879–1891 52 Gubler, F. et al. (1997) Cloning of a rice cDNA encoding a transcription factor homologous to barley GAMyb. Plant Cell Physiol. 38, 362–365 53 Weston, K. (1998) Myb proteins in life, death and differentiation. Curr. Opin. Genet. Dev. 8, 76–81 54 Gubler, F. et al. (1999) Target genes and regulatory domains of the GAMYB transcriptional activator in cereal aleurone. Plant Cell 17, 1–9 55 Raventos, D. et al. (1998) HRT, a novel zinc finger, transcriptional repressor from barley. J. Biol. Chem. 273, 23313–23320 56 Hoecker, U. et al. (1995) Integrated control of seed maturation and germination programs by activator and repressor functions of Viviparous-1 of maize. Genes Dev. 9, 2459–2469 57 Rogers, J.C. and Rogers, S.W. (1992) Definition and functional implications of gibberellin and abscisic acid cis-acting hormone response complexes. Plant Cell 4, 1443–1451 58 Rogers, J.C. et al. (1994) The cis-acting gibberellin response complex in highpI ␣-amylase gene promoters. Plant Physiol. 105, 151–158 59 Willmott, R.L. et al. (1998) DNase1 footprints suggest the involvement of at least three types of transcription factors in the regulation of ␣-Amy2/A by gibberellin. Plant Mol. Biol. 38, 817–825 60 Tregear, J.W. et al. (1995) Functional analysis of linker insertions and point mutations in the ␣-Amy2/54 GA-regulated promoter. Plant Mol. Biol. 29, 749–758 61 Rushton, P.J. et al. (1995) Members of a new family of DNA-binding proteins bind to a conserved cis-element in the promoters of ␣-Amy2 genes. Plant Mol. Biol. 29, 691–702 P ost-embryonic development in higher plants is characterized by the reiterative formation of lateral organs from the flanks of apical meristems1 . A shoot apical meristem (SAM) is initially formed during embryogenesis, and derivatives of this meristem give rise to the above-ground portion of the plant. The SAM contains a population of pluripotent stem cells, which serve three primary functions1–4 : (1) Lateral organs, such as leaves, are produced from the peripheral regions of the SAM. (2) The basal regions of the SAM contribute to the formation of the stem. (3) The stem cells of the SAM must replenish those regions from which cells have been recruited and maintain the pool of stem cells required for further growth. In general, we focus on SAMs in this review, although extrapolation of concepts to other shoot meristems, such as flower meristems, will be discussed when pertinent. As a result of histological analyses the SAM has been subdivided in two different manners. First, three distinct zones of the SAM are defined by cytoplasmic densities and cell division rates: the peripheral zone, the central zone and the rib zone1–4 (Fig. 1). These three zones might represent a functional subdivision of the SAM although direct evidence for this is lacking. Lateral organs are produced from cells recruited from the peripheral zone whereas stem tissue is derived from cells recruited from the rib zone. The central zone acts as a reservoir of stem cells, which replenish both the peripheral and rib zones, as well as maintaining the integrity of the central zone. It should be noted that these cells do not act as permanent initials, but rather their behavior is governed in a position-dependent manner. Second, the SAM is also composed of clonally distinct layers of cells5 (Fig. 1). The fact that the peripheral and central zones, as well as the lateral organs produced, contain cells from the three clonally distinct layers indicates that communication between cell layers is required to coordinate developmental processes5,6 . For example, leaves in most eudicot species are composed of derivatives from the epidermal layer (L1), the subepidermal layer (L2) and corpus (L3)6 . One of the earliest markers of leaf initiation from the peripheral zone is the periclinal cell divisions in specific regions in the L2. Cells in the L1 and L3 adjust their growth accordingly, with the entire region acting coordinately to produce a leaf primordium. In this review, we discuss some recent advances in our understanding of three aspects of meristem functioning: the origin of the SAM during embryogenesis, the maintenance of the stem cell population in the central zone, and the relationships between lateral organ primordia and the meristems from which they are produced. Several excellent reviews cover broader views of the biology of the SAM (Refs 2–4). Formation and maintenance of the shoot apical meristem John L. Bowman and Yuval Eshed Development in higher plants is characterized by the reiterative formation of lateral organs from the flanks of shoot apical meristems. Because organs are produced continuously throughout the life cycle, the shoot apical meristem must maintain a pluripotent stem cell population. These two tasks are accomplished within separate functional domains of the apical meristem. These functional domains develop gradually during embryogenesis. Subsequently, communication among cells within the shoot apical meristem and between the shoot apical meristem and the incipient lateral organs is needed to maintain the functional domains within the shoot apical meristem. Alison Lovegrove and Richard Hooley* are at IACR-Long Ashton Research Station, Dept of Agricultural Sciences, University of Bristol, Long Ashton, Bristol, UK BS41 9AF. *Author for correspondence (tel ϩ44 1275 392181; fax ϩ44 1275 394281; e-mail richard.hooley@bbsrc.ac.uk). Embryonic origin of the shoot apical meristem The origin of the SAM during embryogenesis has been the subject of controversial debate7,8 . The primary point of contention is whether the cotyledons are formed from the SAM, or if the SAM and cotyledons arise independently. Resolution of this question has major implications, influencing ideas on the homology of leaves and cotyledons. We will not attempt to resolve this question here, but rather argue that the complex histology of the mature SAM is built up gradually during embryogenesis. Although the tunica–corpus structure, which is characteristic of the SAM (Fig. 1), is not evident until the torpedo stage of embryogenesis in Arabidopsis (well after the initiation of the coty- ledons)8 , the apical histological zonation (Fig. 1) is visible before cotyledon initiation in some species7 . This has led to competing hypotheses: either the SAM is formed by the apical portion of the globular embryo, or alternatively, the SAM is not formed until the tunica–corpus structure is evident at the late-heart or earlytorpedo stage of embryogenesis. Two recent studies9,10 have addressed this issue using gene expression patterns as histological markers to analyze the development of the apical portion of the Arabidopsis embryo from the globular through the torpedo stages. The primary conclusions from these studies (Fig. 2) are that: (1) The complex gene expression patterns (histology) of the SAM develop gradually during embryogenesis. (2) Both independent and interdependent relationships exist among genes directing SAM establishment and maintenance. (3) The apical portion of the globular embryo is divided into domains, demarcated by gene expression patterns, with distinct developmental fates. One of the earliest genes expressed is WUSCHEL (WUS), whose mature SAM expression is limited to a small group of cells underneath the outer three layers (in the L3), but is first expressed in the apical subepidermal cells at the 16-cell stage of embryogenesis11 . The WUS expression pattern gradually becomes limited to deeper regions of the SAM as it forms (Fig. 2), suggesting that cell–cell interactions probably dictate the boundaries of its expression domain. SHOOT MERISTEMLESS (STM), CUP-SHAPED COTYLEDON2 (CUC2) and AINTEGUMENTA (ANT) are all first expressed in the late globular embryo9,10 . By the early transition stage the expression patterns of these genes divide the apical portion of the embryo into three regions9,10 (Fig. 2): • A central region destined to give rise to the SAM (STM and CUC2). • A peripheral region, which is further subdivided into (i) regions that will produce cotyledons (ANT) and (ii) regions where growth will be suppressed, which form the boundaries between the cotyledons (STM, CUC2 and ANT). Later during the heart stage, CUC2 expression becomes restricted to the boundary regions between the cotyledons and the SAM (Fig. 2) – this restriction is dependent upon STM activity10 . Although CUC2 and STM have complementary expression patterns in the mature SAM, they are expressed in overlapping domains during embryogenesis. This implies that other factors are involved in establishing the complementary expression patterns of the two genes10 . CUC2, which acts redundantly with CUC1, is proposed to have a role in the separation of organs from the meristem and from each other12 , in a manner analogous to that of NO APICAL MERISTEM in petunia13 . By early heart stage, after cotyledon primordia have formed, UNUSUAL FLORAL ORGANS (UFO) and CLAVATA1 (CLV1) are activated in the L2 and L3 of the presumptive SAM (Ref. 9). Although the function of UFO in the SAM is unknown, CLV1 acts with CLV3 and WUS to maintain the integrity of the central zone. Both initial UFO expression and maintenance of CLV1 expression requires STM activity, implying that STM acts to initiate a developmental program required to establish or maintain several components of the SAM (Ref. 9), consistent with the loss-of-function phenotype of stm mutants8 . From these studies it is clear that the apical region of the globular embryo is progressively subdivided during development, and that the establishment of the functional regions of the SAM is a gradual and dynamic process that occurs during embryonic pattern formation. In general, it appears that the earliest acting genes are required for establishment or maintenance of stem cell fate or alternatively, repression of differentiation (e.g. WUS, STM). Whereas genes whose expression is initiated later might be involved in regulating the size of the central zone (e.g. CLV1). Maintenance of the central zone One striking property of SAMs is their ability to remain relatively constant in size. For example, the SAM of a several-hundredyear-old mountain ash (Sorbus aucuparia) does not differ significantly in size from the SAM of its cognate sapling. This is all the more remarkable considering the continual production of lateral organs from the peripheral zones and the lack of cell lineage restriction in determining cell fates3,14–16 . These properties suggest that cells within the SAM must continually assess their positions relative to others, and subsequently decide to divide, differentiate or remain as they are. Failure to choose appropriately leads to either an accumulation of cells within the SAM, or alternatively, loss of cells from the SAM, which in turn eventually leads to a failure of SAM maintenance. Several mutants accumulating too many cells in the SAM have been identified in Arabidopsis, and these mutants fall primarily into two classes. The clavata mutants accumulate excess cells in the central zone17,18 . By contrast, organ 111 trends in plant science Reviews March 2000, Vol. 5, No. 3 Fig. 1. Histology of the shoot apical meristem (SAM). (a) Lateral organs are produced from cells recruited from the peripheral zone (PZ), whereas the bulk of the stem is derived from cells recruited from the rib zone (RZ; the outermost layers of the stem are derived from the peripheral zone). The central zone (CZ) acts as reservoir of stem cells, which replenishes both the peripheral and rib zones as well as maintaining the integrity of the central zone itself. (b) The SAM is composed of clonally distinct layers of cells. In the SAMs of eudicot plants, there are typically three layers. However, the SAMs of many monocots, including grasses, are composed of only two layers. The epidermal layer (L1) forms one clone, its integrity being maintained by the almost exclusively anticlinal orientations of cell division within the layer. The subepidermal layer (L2) also exhibits almost exclusive anticlinal orientations of cell division, which maintain its clonal distinctness. The L1 and L2 are collectively referred to as the tunica. Cells interior to the L2 constitute the corpus (L3), in which various planes of cell division are observed. FILAMENTOUS FLOWER (FIL) expression (brown color) demarcates lateral organ anlagen in the peripheral zone and the abaxial domains of leaf primordia in Arabidopsis37,38 . (a) (b) CZ PZ PZ L1 L2 L3 RZ initiation is affected in the mgoun mutants, and the location of accumulation of excess cells is not presently clear19 . Mutants of both classes also appear to have enlarged rib zones17–19 . Based on morphology, histology and gene expression patterns, mutations in CLAVATA1 (CLV1) or CLV3 lead to an accumulation of cells in the central zone17,18,20–22 . Such a phenotype could either be because of an increase in cell division rates in the central zone, or alternatively, a reduction in the rate of recruitment of cells from the central zone to the peripheral zone. A reduction in the rate of recruitment has been argued based on observations of cell division rates in the central zone of SAMs in clv1 mutants22 . In wild-type SAMs, cell division rates are slower in the central zone than in the adjacent peripheral zone, whereas in clv1 mutants, cell division rates within the central zone of both inflorescence meristems and meristems of seven-day-old seedlings were measured to be lower than that of the wild-type central zones22 . Although this would suggest that the accumulation of cells in the central zone is caused by a reduction in the rate of cells being recruited into the peripheral zone, a possible caveat is that observations on already enlarged meristems could be misleading because of developmental epistasis. That is, that the reduction in cell division rates in mature inflorescence meristems might be a consequence of earlier alterations in the functioning of the meristem. A more conclusive experiment would be to analyze the structure of the SAM late in embryogenesis before the production of the first set of leaves. In this case, it is apparent that SAMs of clv3 embryos contain many more cells that those of the wild type18 . Likewise, slightly later in development, after the initiation of the first pair of leaves, there are considerably more cells in clv1 and clv3 SAMs than in wild-type SAMs (Ref. 23). Although these phenotypes could be caused by leaf anlagen initiation during embryogenesis, the observation that clv mutants produce more leaves per day23 suggests that the accumulation of cells in the central zone in these mutants is probably caused by an increased cell division rate in the central zone itself. Further studies are needed to resolve this issue. The converse phenotype, the inability to maintain a population of stem cells in the central zone, has been described for plants with mutations in the WUS gene24 . SAM’s can be initiated by WUS mutants, but cells within these SAMs are recruited to form lateral organs without replenishment of the stem cell population in the central zone24 . Thus mutations in WUS and CLV1/CLV3 have essentially opposite effects on the stem cell population of the central zone, suggesting that these genes act in pathways to promote and restrict cell division rates, respectively, within the central zone. Genetic interactions, the expression patterns and nature of the encoded gene products of CLV1, CLV3 and WUS has led to the development of a model of their action (Fig. 3). CLV1, whose 112 trends in plant science Reviews March 2000, Vol. 5, No. 3 Fig. 2. Expression patterns of genes directing the establishment and maintenance of the shoot apical meristem (SAM) form gradually during embryogenesis. (a–f) Expression patterns of six genes: the upper panel depicts the expression in a frontal section9 of a late globular-transition stage of embryogenesis and the lower panel shows expression in a vegetative SAM. WUSCHEL (WUS)11 , SHOOT MERISTEMLESS (STM)9,47 , CUPSHAPED COTYLEDON2 (CUC2)10 and AINTEGUMENTA (ANT)9 are all expressed by the transition stage, whereas expression of CLAVATA1 (CLV1)9,20 and UNUSUAL FLORAL ORGANS (UFO)9,48 is not detected until the heart stage. The expression pattern shown for CUC2 in the vegetative SAM is an extrapolation of its reported embryonic expression10 and that observed for NO APICAL MERISTEM (NAM)13 . PHANTASTICA (PHAN)33 and FILAMENTOUS FLOWER (FIL)37,38 (brown staining in each of the vegetative SAM panels) also mark the lateral organ anlagen in a manner similar to that of ANT1 (Refs 2,49). It should be noted that the expression patterns depicted here are extrapolated from different sections and that the precise patterns might differ from those shown. In addition, only qualitative patterns are shown here, but quantitative variations might be present as well. (g–k) Complex and dynamic subdivision of the apical portion of the embryo. STM expression is depicted in orange; CUC2 depicted in pink; ANT depicted in yellow; STM ϩ ANT depicted in red; STM ϩ UFO depicted in blue; STM ϩ CLV1 depicted in green; STM ϩ CLV1 ϩ UFO depicted in purple. (g and h) Depiction of the globular stage embryo in which ANT is expressed around the periphery and STM is expressed at the periphery between the cotyledon anlagen9 . By the early heart stage (i), STM expression is also expressed in the central region and, along with UFO, marks the site of the presumptive SAM (Ref. 9). During the heart stage (j), CLV1 is expressed in the central region whereas UFO is restricted to the margins of the central region9 . Although STM and CUC2 have similar expression patterns at the transition stage9,10 , during the heart stage STM and CUC2 resolve to complementary patterns, with STM expressed in the central region (which will give rise to the SAM) and CUC2 expressed at the boundaries between the SAM and the cotyledon primordia10 (k). (g–k) Adapted from Refs 9 and 10. Trends in Plant Science (a) (b) (c) (d) (e) (g) (h) (i) (j) (k) (f) WUS STM CUC2 ANT CLV1 UFO mRNA is present primarily in the L3 of the central zone (its expression might also extend into the L2), encodes a leucinerich repeat (LRR) receptor kinase20,21 . CLV3, whose mRNA is primarily restricted to the L1 and L2 of the central zone, encodes a small, putatively secreted protein21 . Because CLV1 and CLV3 are proposed to act in a common pathway18 , they might act as a receptor-ligand pair in a signal transduction cascade that restricts cell division rates in the central zone21 . The limited expression domains of CLV1 and CLV3 imply that these genes act non-cellautonomously to regulate central zone size, and suggests that extensive cell–cell signaling, both within and between zones in the meristem, is required for the maintenance of SAM integrity. WUS encodes a homeodomain transcription factor and WUS mRNA is localized to the L3 of the central zone11 . It has been proposed that WUS-expressing cells act as an organizing center, conferring stem-cell identity to overlying neighboring cells11 in a manner similar to that of the quiescent center in the root meri- stem25,26 . Because wus mutations are epistatic to clv1 mutations24 , the CLV1/CLV3 signaling pathway could potentially act to negatively regulate the activity of WUS directly. Thus one possible model is that WUS promotes stem cell fate non-cell autonomously among cells of the central zone11 , and that the CLV1/CLV3 signaling pathway dampens this promotion by restricting cell division within the central zone17,18,20–22 . However, several key questions remain. First, although CLV1/ CLV3 activity is mitigated by KAPP (Refs 27,28), acts through a complex that includes a Rho GTPase (Ref. 29) and is likely to be modulated by CLV2 [another LRR receptor-like protein that might heterodimerize with CLV1 (Ref. 30)], the ultimate targets of this signal transduction cascade are unknown. Could WUS itself be a target? Second, how does expression of WUS in the L3 of the central zone non-cell, autonomously influence cell division in the overlying cells? Third, what is the significance of the dynamic WUS expression pattern within the meristem11 ? The pattern correlates with the nature of primordia initiation by the meristem: • Expression in the upper layers (L2 or uppermost L3) when opposite or whorled primordia are formed (e.g. floral organs by flower meristems). • Expression deeper in the L3, when primordia are initiated in a spiral manner (e.g. leaf initiation by mature vegetative meristems). However, it is unclear if the changes in WUS expression are involved in the alteration of phyllotaxy. Intriguingly, CLV1 expression also appears to shift upward when organs are initiated in a whorled manner by the flower meristems20 . Fourth, and perhaps more interestingly, how is the relative activity of the CL1/CLV3 system regulated? Because the extent of cell division required in the central zone is profoundly influenced by the need to replenish the loss of cells in the peripheral zone (associated with lateral organ formation), these processes are likely to be intimately linked. One attractive hypothesis is that lateral organ primordia communicate their formation to the SAM, resulting in a replenishment of the peripheral zone from cells ultimately derived from the central zone. Regulation of meristem function by its lateral organ primordia The effects of signals emanating from mature leaves on the fate of the apical meristem are already part of botany textbooks. Recently, two different approaches demonstrated that such effects also occur during primordia initiation. First, the localized exogenous application of the cell-wall-loosening protein EXPANSIN to the organ anlage of live tomato apices promoted organ primordia formation at the site of application31 . Moreover, altering the normal positions of primordia initiation can influence the phyllotactic pattern of primordia initiation, implying primordium–SAM communication. Although the expression pattern of EXPANSIN mRNA is correlated with the pattern of primordia initiation32 , it is unclear whether the effects of ectopic EXPANSIN activity are mediated via biochemical or biophysical effects33 , or a combination of both. Non-cell-autonomous relationships between the SAM and lateral organ primordia have also been uncovered in studies of the Antirrhinum mutation phantastica (phan)34,35 . PHAN, which encodes a MYB-related protein, is expressed throughout lateral organ primordia. However, when mutant plants are grown in nonpermissive conditions they develop radialized leaves and arrested SAMs (Ref. 35). The radial leaves of phan mutants appear to consist predominantly of abaxial cell types34 . Thus, although PHAN is expressed in lateral organ primordia and appears to promote adaxial cell fate, it is required non-cell-autonomously to maintain a functional apical meristem. By contrast, leaves of the Arabidopsis semi-dominant mutant phabulosa-1d (phb-1d) are radial with ubiquitous adaxial cell types36 . In phb-1d mutants, the apical meristem is enlarged and axillary meristems are formed around the entire circumference of the leaves. These observations led to the proposal that adaxial cell fate promotes meristem formation36 . Conversely, abaxial cell fate might be incompatible with meristem maintenance. Consistent with this hypothesis is the failure to maintain a functional meristem in phan mutants34,35 . Recently, several members of the YABBY gene family have been proposed to promote abaxial cell fate in lateral organs37–39 . Each family member is expressed in the abaxial domains of one or more 113 trends in plant science Reviews March 2000, Vol. 5, No. 3 Fig. 3. Expression patterns of genes involved in maintaining the integrity of the central zone. CLAVATA3 (CLV3) mRNA is restricted to the epidermal layer (L1) and subepidermal layer (L2) of the central zone21 , whereas CLV1 mRNA is detected in the corpus (L3) of the central zone20 . During vegetative development WUSCHEL (WUS) mRNA is restricted to a few cells within the L3, below the uppermost layer of the L3 (Ref. 11). It has been proposed that CLV3 acts as a secreted ligand for the CLV1 receptor, and that this signaling is responsible for restricting the size of the central zone20,21 . By contrast, WUS is required to maintain an active central zone, possibly by non-cell autonomously conferring a stem cell identity on cells overlying its expression domain11 . The relative overlaps in expression of these three genes in this figure are estimated based on comparisons of published data, although the simultaneous detection of these genes might alter this view. FILAMENTOUS FLOWER (FIL) expression demarcates lateral organ anlagen in the peripheral zone. CLV3 WUS CLV1 FIL above-ground lateral organs. Ectopic expression of either of two members of the YABBY gene family, FILAMENTOUS FLOWER (FIL) or YABBY3, throughout the plant at a low level results in partial conversion of adaxial tissues into abaxial ones. However, with higher levels of ectopic expression, plants produce only abaxialized cotyledons and display meristem arrest37 . Because YABBY gene family members appear to promote abaxial cell fate37–39 , it suggests that abaxial cell fates and meristematic fates are incompatible. One speculative model consistent with the above observations is that as cells are set aside to become lateral organ primordia in the peripheral zone of the SAM. Signals from the SAM itself are required for the specification of adaxial cell fate within the lateral organ anlagen (Fig. 4). Subsequently, signals emanating from the adaxial regions of emerging lateral organ primordia would stimulate the SAM to replenish the peripheral zone depleted by the recruitment of cells into the lateral organs36 . The nature of the proposed signals and their mechanism of transduction are presently an enigma and remain a challenge for the future. Complexities of the relationships between SAMs and lateral organs are further exposed by the analysis of the maize ortholog of PHAN – ROUGH SHEATH2 (RS2)40,41 . Leaves of rs2 mutants appear similar to gain-of-function alleles of the SAM-specific KNOTTED class I genes42–44 . Indeed, several genes of that group were shown to be misregulated in either phan or rs2 mutants40–42 , leading to the concept that PHAN and RS2 might have different functions in Antirrhinum and Zea leaves, respectively40,41 . Specifically it was suggested that RS2 could be involved in establishing the proximal–distal axis rather than the abaxial–adaxial axis in developing leaves41 . However, the development of these two axes might be linked and one consequence of severely abaxialized lateral organs could be a concomitant loss of proximal–distal development34,35,37 . Analysis of orthologous genes in other species might be required to clarify this issue. Conclusions The primary theme from the three vignettes presented is that cells within the SAM are constantly reassessing their positions and fates with respect to their neighbors to ensure proper formation and maintenance of the SAM. Thus, SAM formation and maintenance are active processes, and it is likely that extensive communication pathways exist within and between the classically defined regions of the meristem, as well as between the SAM and incipient lateral organ primordia. This view of the SAM is consistent with position-dependent rather than lineage-dependent development. Extensive communication pathways imply numerous receptors and their corresponding ligands, or perhaps morphogens as conduits for cells talking to their neighbors and beyond. Given the many candidate molecules uncovered by the Arabidopsis genome-sequencing project (such as Refs 45,46), a challenge for the future is to identify specific components that mediate such communication pathways, and elucidate their interactions in developing plants. Acknowledgements We apologize to those researchers whose work we were unable to cite because of space limitations. For those whose work is cited, we assume full responsibility for any errors in interpretation or presentation. Work in J.L.B.’s laboratory is supported by the National Science Foundation, the US Dept of Agriculture (NRICGP), the Dept of Energy (Division of Biosciences), and the Beckman Foundation. Y.E. was partially supported by a postdoctoral fellowship from BARD. References 1 Steeves, T.A. and Sussex, I.M. (1989) Patterns in Plant Development (2nd edn), Cambridge University Press 2 Barton, M.K. (1998) Cell type specification and self-renewal in the vegetative shoot apical meristem. Curr. Opin. Plant Biol. 1, 37–42 3 Meyerowitz, E.M.(1997) Genetic control of cell division patterns in developing plants. Cell 88, 299–308 4 Lenhard, M. and Laux, T. (1999) Shoot meristem formation and maintenance. Curr. Opin. Plant Biol. 2, 44–50 5 Satina, S. et al. (1940) Demonstrations of the three germ layers in the shoot apex of Datura by means of induced polyploidy in periclinal chimeras. Am. J. Bot. 27, 895–905 6 Satina, S. and Blakeslee, A.F. (1941) Periclinal chimeras in Datura stramonium in relation to development of leaf and flower. Am. J. Bot. 28, 862–871 7 Kaplan, D.R. and Cooke, T.J. (1997) Fundamental concepts in the embryogenesis of dicotyledons: a morphological interpretation of embryo mutants. Plant Cell 9, 1903–1919 8 Barton, M.K. and Poethig, R.S. (1993) Formation of the shoot apical meristem in Arabidopsis thaliana: an analysis in the wild type and in the shoot meristemless mutant. Development 119, 823–831 114 trends in plant science Reviews March 2000, Vol. 5, No. 3 Fig. 4. Model for interactions between lateral organ primordia and the apical meristem. Experiments in which incipient leaf primordia were separated by incisions from the shoot apical meristem have suggested that the apical meristem might be the source for a signal required for the proper abaxial–adaxial development of the leaf because the isolated primordia developed into radially symmetric, apparently abaxialized, organs50,51 (arrow 1). One interpretation is that signals emanating from the apical meristem promote adaxial cell fate, and in the absence of such signals, abaxial cell fate is the default pattern of differentiation. The establishment of the abaxial and adaxial domains occurs during the transition from leaf anlagen to leaf primordium because older primordia can develop autonomously into phenotypically normal leaves50,51 . The suggestion that adaxial leaf fate has a positive influence on the maintenance of the meristem (arrow 2) is supported by the phenotype of the adaxialized phb-1d mutant, in which axillary meristems are formed around the basal circumference of the radial leaves and the apical meristem is itself enlarged36 . Thus, meristems produce lateral organs that in turn stimulate meristem formation or regeneration36 . The failure to maintain a functional meristem when lateral organs are abaxialized is also consistent with this proposed signaling34,35,37 . The nature of the proposed signals, their transduction (e.g. via plasmodesmata52–54 or secreted ligands) and the precise points of origin and perception (e.g. central or peripheral zone) are presently an enigma. Approximate boundaries of the central, peripheral and rib zones are shown in blue. AN, leaf anlagen. 1 2 AN 115 trends in plant science Reviews March 2000, Vol. 5, No. 3 9 Long, J.A. and Barton, M.K. (1998) The development of apical embryonic pattern in Arabidopsis. Development 125, 3027–3035 10 Aida, M. et al. (1999) Shoot apical meristem and cotyledon formation during Arabidopsis embryogenesis: interaction among the CUP-SHAPED COTYLEDON and SHOOT MERISTEMLESS genes. Development 126, 1563–1570 11 Mayer, F.F.X. et al. (1998) Role of WUSCHEL in regulating stem cell fate in the Arabidopsis shoot meristem. Cell 95, 805–815 12 Aida, M. et al. (1997) Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 9, 841–857 13 Souer, E. et al. (1996) The No Apical Meristem gene of petunia is required for pattern formation in embryos and flowers and is expressed at meristem and primordia boundaries. Cell 85, 159–170 14 Dawe, R.K. and Freeling, M. (1991) Cell lineage and its consequences in higher plants. Plant J. 1, 3–8 15 Irish, V.F. (1991) Cell lineage in plant development. Curr. Opin. Cell Biol. 3, 983–987 16 Poethig, S. (1989) Genetic mosaics and cell lineage analysis in plants. Trends Genet. 5, 273–277 17 Clark, S.E. et al. (1993) CLAVATA1, a regulator of meristem and flower development in Arabidopsis. Development 119, 397–418 18 Clark, S.E. et al. (1995) CLAVATA3 is a specific regulator of shoot and floral meristem development affecting the same processes as CLAVATA1. Development 121, 2057–2067 19 Laufs, P. et al. (1998) MGOUN1 and MGOUN2: two genes required for primordium initiation at the shoot apical and floral meristems in Arabidopsis thaliana. Development 125, 1253–1260 20 Clark, S.E. et al. (1997) The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and meristem size in Arabidopsis. Cell 89, 575–585 21 Fletcher, J.C. et al. (1999) Signaling of cell fate decisions by CLAVATA3 in Arabidopsis shoot meristems. Science 283, 1911–1914 22 Laufs, P. et al. (1998) Cellular parameters of the shoot apical meristem in Arabidopsis. Plant Cell 10, 1375–1389 23 Griffith, M. (1994) Apical meristem mutants. In Arabidopsis: An Atlas of Morphology and Development (Bowman, J., ed.), pp.18–21 Springer-Verlag 24 Laux, T. et al. (1996) The WUSCHEL gene is required for shoot and floral meristem integrity in Arabidopsis. Development 122, 87–96 25 Barlow, P. (1974) Regeneration of the cap of primary roots of Zea mays. New Phytol. 73, 937–954 26 van Den Berg, C. et al. (1997) Short-range control of cell differentiation in the Arabidopsis root meristem. Nature 390, 287–289 27 Williams, R.W. et al. (1997) A possible role for kinase-associated protein phosphatase in the Arabidopsis CLAVATA1 signaling pathway. Proc. Natl. Acad. Sci. U. S. A. 94, 10467–10472 28 Stone, J.M. et al. (1998) Control of meristem development by CLAVATA1 receptor kinase and kinase associated protein phosphatase interactions. Plant Physiol. 117, 1217–1225 29 Trotochaud, A.E. et al. (1999) The CLAVATA1 receptor-like kinase requires CLAVATA3 for its assembly into a signaling complex that includes KAPP and a rho-related protein. Plant Cell 11, 393–405 30 Jeong, S. et al. (1999) The Arabidopsis CLAVATA2 gene encodes a receptorlike protein required for the stability of the CLAVATA1 receptor-like kinase. Plant Cell 11, 1925–1934 31 Fleming, A.J. et al. (1997) Induction of leaf primordia by the cell wall protein expansin. Science 276, 1415–1418 32 Reinhardt, D. et al. (1998) Localized upregulation of a new expansin gene predicts the site of leaf formation in the tomato meristem. Plant Cell 10, 1427–1437 33 Green, P.B. (1999) Expression of pattern in plants: combining molecular and calculus-based biophysical paradigms. Am. J. Bot. 86, 1059–1076 34 Waites, R. and Hudson, A. (1995) phantastica: a gene required for dorsoventrality of leaves in Antirrhinum majus. Development 121, 2143–2154 35 Waites, R. et al. (1998) The phantastica gene encodes a MYB transcription factor involved in growth and dorsoventrality of lateral organs in Antirrhinum. Cell 93, 779–789 36 McConnell, J.R. and Barton, M.K. (1998) Leaf polarity and meristem formation in Arabidopsis. Development 125, 2935–2942 37 Siegfried, K.R. et al. (1999) Members of the YABBY gene family specify abaxial cell fate in Arabidopsis. Development 126, 4117–4128 38 Sawa, S. et al. (1999) FILAMENTOUS FLOWER, a meristem and organ identity gene of Arabidopsis, encodes a protein with a zinc finger and HMGrelated domains. Genes Dev. 13, 1079–1088 39 Eshed, Y. et al. (1999) Abaxial cell fate in the carpels is established by two distinct mechanisms. Cell 99, 199–209 40 Timmermans, M.C.P. et al. (1999) ROUGH SHEATH2: a myb protein that represses knox homeobox genes in maize lateral organ primordia. Science 284, 151–153 41 Tsiantis, M. et al. (1999) The maize rough sheath2 gene and leaf development programs in monocot and dicot plants. Science 284, 154–156 42 Schneeberger, R. et al. (1998) The rough sheath2 gene negatively regulates homeobox gene expression during maize leaf development. Development 125, 2857–2865 43 Freeling, M. and Hake, S. (1985) Developmental genetics of mutants that specify knotted leaves in maize. Genetics 111, 617–634 44 Vollbrecht, E. et al. (1991) The developmental gene Knotted-1 is a member of a maize homeobox gene gamily. Nature 350, 241–243 45 Lin, X. et al. (1999) Sequence analysis of chromosome 2 of Arabidopsis thaliana. Nature 402, 761–768 46 Mayer, K. et al. (1999) Sequence analysis of chromosome 4 of the plant Arabidopsis thaliana. Nature 402, 769–777 47 Long, J.A. et al. (1996) A member of the KNOTTED class of homeodomain proteins encoded by the SHOOTMERISTEMLESS gene of Arabidopsis. Nature 379, 66–69 48 Lee, I. et al. (1997) A LEAFY co-regulator encoded by UNUSUAL FLORAL ORGANS. Curr. Biol. 7, 95–104 49 Elliott, R.E. et al. (1996) AINTEGUMENTA, an APETALA2-like gene of Arabidopsis with pleiotropic roles in ovule development and floral organ growth. Plant Cell 8, 155–168 50 Sussex, I.M. (1954) Experiments on the cause of dorsiventrality in leaves. Nature 174, 351–352 51 Sussex, I.M. (1955) Morphogenesis in Solanum tuberosum L.: experimental investigation of leaf dorsoventrality and orientation in the juvenile shoot. Phytomorphology 5, 286–300 52 Rinne, P.L.H. and van der Schoot, C. (1998) Symplasmic fields in the tunica of the shoot apical meristem coordinate morphogenetic events. Development 125, 1477–1485 53 Gisel, A. et al. (1999) Temporal and spatial regulation of symplastic trafficking during development in Arabidopsis thaliana apices. Development 126, 1879–1889 54 Ruiz-Medrano, R. et al. (1999) Phloem long-distance transport of CmNACP mRNA: implications for supracellular regulation in plants. Development 126, 4405–4419 John L. Bowman* and Yuval Eshed are at the Section of Plant Biology, UC Davis, Davis, CA 95616, USA. *Author for correspondence (tel ϩ1 530 754 9652; fax ϩ1 530 752 5410; e-mail jlbowman@ucdavis.edu).