Introduction
Protein Data Bank
Radka Svobodová
CEITEC Masaryk University
What is the Protein Data Bank (PDB)?
PDBe.org
An archive of experimentally determined
3-dimensional structures of biological macromolecules
Protein, nucleic acids, sugars
Available to
anyone
for free
Worldwide Protein Data Bank - wwPDB
wwpdb.org
wwPDB.org
‘The PDB’
FTP Archive
Methods of solving the structures
PDBe.org
10% solution NMR
Spectroscopy
1% Electron
microscopy
88% X-ray
crystallography
‘Other’: Fibre diffraction
Neutron Crystallography
Solid state NMR
Methods of solving the structures
PDBe.org
10% solution NMR
Spectroscopy
1% Electron
microscopy
88% X-ray
crystallography
‘Other’: Fibre diffraction
Neutron Crystallography
Solid state NMR