Demography - study of organisms with special attention to stage or age structure processes associated with age, stage or size x .. age/stage/size category px .. age/stage/size specific survival mx .. reproductive rate (expected average number of offspring per female) x x x S S p 1+ = main focus on births and deaths immigration & emigration is ignored no adult survive one (not overlapping) generation per year egg pods over-winter despite high fecundity they just replace themselves Chorthippus Richards & Waloff (1954) Annual speciesAnnual species breed at discrete periods no overlapping generations BBiennaliennal speciesspecies breed at discrete periods adult generation may overlap adults adults 0 birth t0 t1 adults pre-adults 0 birth t0 t1 adults t2 p pre-adults birth t0 t1adults t2 0 pre-adults p breed at discrete periods breeding adults consist of individuals of various ages (1-5 years) adults of different generations are equivalent overlapping generations PerennialPerennial speciesspecies Parus major Perins (1965) age/stage classification is based on developmental time size may be more appropriate than age (fish, sedentery animals) Hughes (1984) used combination of age/stage and size for the description of coral growth Age-size-stage life-tableAge-size-stage life-table Agaricia agaricites show organisms‘ mortality and reproduction as a function of age examination of a population during one segment (time interval) - segment = group of individuals of different cohorts - designed for long-lived organisms ASSUMPTIONS: - birth-rate and survival-rate are constant over time - population does not grow DRAWBACKS: confuses age-specific changes in e.g. mortality with temporal variation Static (vertical) life-tables Cervus elaphus Sx- number of survivors Dx- number of dead individuals lx- standardised number of survivors qx- age specific mortality Lowe (1969) 0S S l x x = x x x S D q = x Sx Dx lx px qx mx 1 129 15 1.000 0.884 0.116 0.000 2 114 1 0.884 0.991 0.009 0.000 3 113 32 0.876 0.717 0.283 0.310 4 81 3 0.628 0.963 0.037 0.280 5 78 19 0.605 0.756 0.244 0.300 6 59 -6 0.457 1.102 -0.102 0.400 7 65 10 0.504 0.846 0.154 0.480 8 55 30 0.426 0.455 0.545 0.360 9 25 16 0.194 0.360 0.640 0.450 10 9 1 0.070 0.889 0.111 0.290 11 8 1 0.062 0.875 0.125 0.280 12 7 5 0.054 0.286 0.714 0.290 13 2 1 0.016 0.500 0.500 0.280 14 1 -3 0.008 4.000 -3.000 0.280 15 4 2 0.031 0.500 0.500 0.290 16 2 2 0.016 0.000 1.000 0.280 1+−= xxx SSD examination of a population in a cohort = a group of individuals born at the same period followed from birth to death provide reliable information designed for short-lived organisms only females are included Cohort (horizontal) life-table Vulpes vulpes x Sx Dx lx px qx mx 0 250 50 1.000 0.800 0.200 0.000 1 200 120 0.800 0.400 0.600 0.000 2 80 50 0.320 0.375 0.625 2.000 3 30 15 0.120 0.500 0.500 2.100 4 15 9 0.060 0.400 0.600 2.300 5 6 6 0.024 0.000 1.000 2.400 6 0 0 0.000 survival and reproduction depend on stage / size rather than age age-distribution is of no interest used for invertebrates (insects, invertebrates) time spent in a stage / size can differ Lymantria dispar Campbell (1981) x Sx Dx lx px qx mx Egg 450 68 1.000 0.849 0.151 0 Larva I 382 67 0.849 0.825 0.175 0 Larva II 315 158 0.700 0.498 0.502 0 Larva III 157 118 0.349 0.248 0.752 0 Larva IV 39 7 0.087 0.821 0.179 0 Larva V 32 9 0.071 0.719 0.281 0 Larva VI 23 1 0.051 0.957 0.043 0 Pre-pupa 22 4 0.049 0.818 0.182 0 Pupa 18 2 0.040 0.889 0.111 0 Adult 16 16 0.036 0.000 1.000 185 display change in survival by plotting log(lx) against age (x) logarithmic transformation allows to compare survival based on different population size sheep mortality increases with age survivorship of lapwing (Vanellus) is independent of age Pearls (1928) classified hypothetical age-specific mortality: Type I .. mortality is concentrated at the end of life span (humans) Type II .. mortality is constant over age (seeds, birds) Type III .. mortality is highest in the beginning of life (invertebrates, fish, reptiles) ln(Survivorship) 0 Type I Type II Type III 1 Time fecundity - potential number of offspring fertility - real number of offspring semelparous .. reproducing once a life iteroparous .. reproducing several times during life birth pulse .. discrete reproduction (seasonal reproduction) birth flow .. continuous reproduction Numberofoffsprings 0 Time reproductivepre-reproductive post-reproductive 0 0.1 0.2 0.3 0.4 0.5 0.6 0 20 40 60 80 100 120 140 Time [Days] Fecundity Triaeris stenapsis Geospiza scandens number.ofbirths/individual 0 0.4 age 16 Cervus elaphus Odocoileus numberofbirths/individual 0 6age 0.8 k-value - killing power - another measure of mortality k-values are additive unlike q Key-factor analysis - a method to identify the most important factors that regulates population dynamics k-values are estimated for a number of years important factors are identified by regressing kx on log(N) )log(pk −= x kK ∑= over-wintering adults emerge in June → eggs are laid in clusters on the lower side of leafs → larvae pass through 4 instars → form pupal cells in the soil → summer adults emerge in August → begin to hibernate in September mortality factors overlap Leptinotarsa decemlineata Harcourt (1971) highest k-value indicates the role of a factor in each generation profile of a factor parallel with the K profile reveals the key factor emigration is the key-factor Summary over 10 years model of Leslie (1945) uses parameters (survival and fecundity) from life-tables where populations are composed of individuals of different age, stage or size with specific births and deaths used for modelling of density-independent processes (exponential growth) Nx,t .. no. of organisms in age x and time t Gx .. probability of persistence in the same size/stage Fx .. age/stage specific fertility px .. age/stage specific survival class 0 is omitted number of individuals in the first age class number of individuals in the remaining age class ∑= + ++== n x ttxtxt FNFNFNN 1 2,21,1,1,1 ... xtxtx pNN ,1,1 =++ N1 N2 N3 N4 Age-structured p12 p23 p34 F4 F3 F2 F1               =               ×             + + + + 1,4 1,3 1,2 1,1 ,4 ,3 ,2 ,1 34 23 12 4321 000 000 000 t t t t t t t t N N N N N N N N p p p FFFF each column in A specifies fate of an organism in a specific age: 3rd column: organism in age 2 produces F2 offspring and goes to age 3 with probability p23 A is always a square matrix Nt is always one column matrix = a vector transition matrix A age distribution vectors Nt 1+= tt NAN fertilities/fecundities (F) and survivals (p) depend on whether population has discrete or continuous reproduction - for populations with discrete pulses post-reproductive survivals and fertilities are - for populations with continuous reproduction post-reproductive survivals and fertilities are x x x S S p 1+ =         + + ≈ − + xx xx x SS SS p 1 1 ( )( ) 4 1 101 ++ = xx x mpmS F xx mpF 0= Egg Larva Pupa Imago Stage-structured p2 p3p1 F4             000 000 000 000 3 2 1 4 p p p F only imagoes reproduce thus F1,2,3 = 0 no imago survives to another reproduction period: p4 = 0 Size-structured Tiny Small Medium Large p1 p2 p3 F4 F3 G11 G22 G33 G44             443 332 221 43211 00 00 00 Gp Gp Gp FFFG model of Lefkovitch (1965) uses 3 parameters (mortality, fecundity and persistence) F1 = 0 F2 addition / subtraction multiplication by a vector by a scalar Matrix operations determinant eigenvalue (λ) λ1 = 2.41 λ2 = -0.41a acbb 2 42 2,1 −±− =λ       =      +      1510 73 85 41 75 32       =×      2115 96 3 75 32       =      ×+× ×+× =      ×      55 23 5745 5342 5 4 75 32 23472 74 32 =×−×=      12)425.0()0()2( 025.0 42 025.0 42 2 −−=×−−×−=      − − =      λλλλ λ λ t 0t ANN = ANN 12 = ANN 23 = 2 2 ANAANN ttt ==+ parameters are constant over time and independent of population density follows constant exponential growth after initial damped oscillations Net reproductive rate (R0) average number of offspring produced by a female in her lifetime Average generation time (T) average age of females when they give birth Expectation of life age specific expectation of life o .. oldest age ∑= = n x xxmlR 0 0 0 0 R mxl T n x xx∑= = 2 1++ = xx x ll L ∑= o x xx LT x x x l T e = Intrinsic growth rate (Intrinsic growth rate (rr )) when Leslie model show exponential growth the potential rate of increase can be determined from Euler (1760) found how to estimate r from the life table r can be estimated from the only dominant positive eigenvalue of the transition matrix A (λ1.. finite growth rate) ∑ =− x rx xx eml 1 T R r )ln( 0 ≈ T R0 ≈λ )ln( 1λ=r - relative abundance of different life history age/stage/size categories population approaches stable age distribution: N0 : N1 : N2 : N3 :...:Ns is stable - once population reached SCD it grows exponentially proportion of individuals (c) in age x w1 .. right eigenvector of the dominant eigenvalue - provides stable age distribution - scale w1 by sum of individuals Stable Class distribution (SCD) ∑ − − = x rx x rx x x el el c ∑ = = S i SCD 1 1 1 w w 111 wAw λ= MODULARIZACE VÝUKY EVOLUČNÍ A EKOLOGICKÉ BIOLOGIE CZ.1.07/2.2.00/15.0204 S. Pekár podzim 2011 Cvičení z Populační ekologie Stage Number Factor Eggs 562 Overwintering Larvae 240 Parasites Pupae 112 Predation Imagoes 64 Factors causing decline in the population of a moth: 1. Estimate k-value for each factor. 2. Simulate change in population density given the following estimated linear models of ki on log(N): overwintering: k1 = 0.48 - 0.04 log(NE) parasites: k2 = 0.55 - 0.09 log(NL) predation: k3 = 0.30 - 0.03 log(NP) The sex ratio is 1:1. Female has average fecundity 17 eggs. Perform demographic study of the common fox using life table menu in POPULUS. The fox breeds in pulses and the data were collected using post-breeding census. Plot standardised survival (lx) with age. Which survival curve type it corresponds to? Plot fecundity (mx) and reproductive value (RV) with age. Construct Leslie transition matrix and project it over a period of another 20 years using initial vector (25, 18, 9, 5, 4). When does the population reach stable age distribution? x lx mx 0 1 0 1 0.8 0 2 0.3 2 3 0.1 3 4 0.07 0