SECOND DERIVATIVE Samples MeanCp STD Cp "C1, D1" 22.92383721 0.047875658 "C2, D2" 25.83890216 0.27383692 "C3, D3" 21.54948291 0.528780968 "C4, D4" 21.46518144 0.129699175 "C6, D6" 27.4464008 0.024057648 "C7, D7" 23.00674242 0.010596774 "C8, D8" 23.58475822 0.036264242 "C9, D9" 0 0 "C10, D10" 0 0 "E1, F1" 14.88371791 0.064857509 "E2, F2" 14.8880545 0 "E3, F3" 14.85874923 0.027447604 "E4, F4" 14.93108556 0.042899481 Include Pos Name Cp True C1 HPRT DMSO I 22.89 True C2 HPRT TCDD 1 25.65 True C3 HPRT DMSO II 21.92 True C4 HPRT TCDD II 21.56 True C5 ABC B1 DMSO True C6 ABC B1 TCDD 27.43 True C7 ABC C1 DMSO 23.01 True C8 ABC C1 TCDD 23.61 True D1 HPRT DMSO I 22.96 True D2 HPRT TCDD 1 26.03 True D3 HPRT DMSO II 21.18 True D4 HPRT TCDD II 21.37 True D5 ABC B1 DMSO True D6 ABC B1 TCDD 27.46 True D7 ABC C1 DMSO 23 True D8 ABC C1 TCDD 23.56 True E1 GAPDH DMSO I 14.84 True E2 GAPDHT TCDD I 14.89 True F1 GAPDH DMSO I 14.93 True F2 GAPDHT TCDD I FIT POINTS Include Pos Name Cp True C1 HPRT DMSO I 22.89 True C2 HPRT TCDD 1 25.65 True C3 HPRT DMSO II 21.92 True C4 HPRT TCDD II 21.56 True C5 ABC B1 DMSO True C6 ABC B1 TCDD 27.43 True C7 ABC C1 DMSO 23.01 True C8 ABC C1 TCDD 23.61 True D1 HPRT DMSO I 22.96 True D2 HPRT TCDD 1 26.03 True D3 HPRT DMSO II 21.18 True D4 HPRT TCDD II 21.37 True D5 ABC B1 DMSO True D6 ABC B1 TCDD 27.46 True D7 ABC C1 DMSO 23 True D8 ABC C1 TCDD 23.56 True E1 GAPDH DMSO I 15.08 True E2 GAPDHT TCDD I 15.12 True E3 GAPDH DMSO II 14.97 True E4 GAPDH TCDD II 14.98 True F1 GAPDH DMSO I 15.01 True F2 GAPDHT TCDD I 15.11 True F3 GAPDH DMSO II 14.94 True F4 GAPDH TCDD II 14.9 Samples MeanCp STD Cp "C1, D1" 24.15796626 0.033981265 "C2, D2" 29.38120391 1.22687794 "C3, D3" 21.19222668 0.683264153 "C4, D4" 21.45716699 0.233364996 "C6, D6" 26.30047707 0.345705132 "C7, D7" 23.49959838 0.22864545 "C8, D8" 24.7071717 0.126839232 "C9, D9" 0 0 "C10, D10" 0 0 "E1, F1" 15.042851 0.052746574 "E2, F2" 15.11116369 0.00641953 "E3, F3" 14.95458034 0.021749891 "E4, F4" 14.94275025 0.05558291 ##### Sheet/List 2 ##### ABS. FIT POINTS Include Pos Name Cp True A3 ABC B1 DMSO 26.77 True A4 ABC B1 TCDD 27.68 True A5 ABC C1 DMSO 25.27 True A6 ABC C1 TCDD 25.69 True A7 ABC G2 DMSO 27.02 True A8 ABC G2 TCDD 27.61 True B3 ABC B1 DMSO 27.11 True B4 ABC B1 TCDD 27.77 True B5 ABC C1 DMSO 25.62 True B6 ABC C1 TCDD 25.67 True B7 ABC G2 DMSO 27.35 True B8 ABC G2 TCDD 27.86 Samples MeanCp STD Cp "A1, B1" 0 0 "A2, B2" 0 0 "A3, B3" 26.93802261 0.238182411 "A4, B4" 27.72399197 0.062346097 "A5, B5" 25.44446044 0.24621653 "A6, B6" 25.6824303 0.01423861 "A7, B7" 27.18605132 0.233230616 "A8, B8" 27.7350624 0.175130143 2ND DERIVATIVE Include Pos Name Cp True A3 ABC B1 DMSO 27.34 True A4 ABC B1 TCDD 27.85 True A5 ABC C1 DMSO 25.18 True A6 ABC C1 TCDD 25.07 True A7 ABC G2 DMSO 26.12 True A8 ABC G2 TCDD 26.63 True B3 ABC B1 DMSO 27.29 True B4 ABC B1 TCDD 27.55 True B5 ABC C1 DMSO 25.22 True B6 ABC C1 TCDD 25.23 True B7 ABC G2 DMSO 26.22 True B8 ABC G2 TCDD 26.39 Samples MeanCp STD Cp "A1, B1" 0 0 "A2, B2" 0 0 "A3, B3" 27.31697159 0.036702946 "A4, B4" 27.70341095 0.213891605 "A5, B5" 25.20357171 0.027401569 "A6, B6" 25.14791291 0.111803602 "A7, B7" 26.16886347 0.068273997 "A8, B8" 26.51253239 0.16760838 ##### Sheet/List 3 ##### Cviceni qRTPCR 2016 qRT-PCR cviceni moderni metody 2016 """Melting curve""" pro vsechny geny jsme ziskali jen jeden produkt - kontrola specifity reace probehla uspesne VYHODNOCENI FIT POINTS MEAN Cp ST. DEV GAPDH DMSO 15.042851 15.042851 0.052746574 GAPDH TCDD 15.11116369 15.11116369 0.00641953 misto HPRT jsme vzali jako referencni house-keeping ABC B1 DMSO 26.93802261 0.238182411 "gene GAPDH, protoze dava vice konzistentni vysledky" ABC B1 TCDD 27.72399197 0.062346097 neovlivnene TCDD ABC C1 DMSO 25.44446044 0.24621653 ABC C1 TCDD 25.6824303 0.01423861 1. porovnej vysledky ziskane pomoci fit points a ABC G2 DMSO 27.18605132 0.233230616 druhe derivace a do dalsiho vyhodnoceni vezmi ABC G2 TCDD 27.7350624 0.175130143 druhou derivaci VYHODNOCENI 2nd DERIVATIVE 2. podle tabulky v protokolu vyhodnot vysledky GAPDH DMSO 14.88371791 0.064857509 DCp 2^-DCp GAPDH TCDD 14.8880545 0.057896 ABC B1 DMSO 27.31697159 0.036702946 3. porovnej vliv TCDD na expresi ABC transporteru ABC B1 TCDD 27.70341095 0.213891605 ABC C1 DMSO 25.20357171 0.027401569 ABC C1 TCDD 25.14791291 0.111803602 ABC G2 DMSO 26.16886347 0.068273997 ABC G2 TCDD 26.51253239 0.16760838