Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2009
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Timetable
- Thu 16:00–19:50 F01B1/709
- Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Predictive Modelling
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- Study Materials
The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2008
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Prerequisites (in Czech)
- Bi5040 Biostatistics - basic course && Bi7490 Intr. to Stochastic Modelling
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Course objectives
- The course is oriented on advanced software for data analyses.
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Assessment methods
- The credit is obtain through presence of student on course.
- Language of instruction
- Czech
- Further Comments
- Study Materials
The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2023
The course is not taught in Autumn 2023
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2022
The course is not taught in Autumn 2022
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of Scienceautumn 2021
The course is not taught in autumn 2021
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2020
The course is not taught in Autumn 2020
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2019
The course is not taught in Autumn 2019
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2018
The course is not taught in Autumn 2018
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: z (credit).
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of Scienceautumn 2017
The course is not taught in autumn 2017
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2016
The course is not taught in Autumn 2016
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2015
The course is not taught in Autumn 2015
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2014
The course is not taught in Autumn 2014
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2013
The course is not taught in Autumn 2013
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2012
The course is not taught in Autumn 2012
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D.
Supplier department: RECETOX – Faculty of Science - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2011
The course is not taught in Autumn 2011
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Mathematical Biology (programme PřF, B-EXB)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2010
The course is not taught in Autumn 2010
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Predictive Modelling
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2011 - acreditation
The course is not taught in Autumn 2011 - acreditation
The information about the term Autumn 2011 - acreditation is not made public
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
Bi8661 Data analysis on PC III
Faculty of ScienceAutumn 2010 - only for the accreditation
The course is not taught in Autumn 2010 - only for the accreditation
- Extent and Intensity
- 0/2/0. 2 credit(s) (plus extra credits for completion). Type of Completion: graded credit.
- Teacher(s)
- RNDr. Eva Gelnarová (seminar tutor)
- Guaranteed by
- prof. RNDr. Ladislav Dušek, Ph.D.
RECETOX – Faculty of Science
Contact Person: RNDr. Jiří Jarkovský, Ph.D. - Prerequisites
- Bi5040 Biostatistics - basic course && Bi7490 Advanced non-parametric method
This subject is suitable for more advanced students with good knowledge of statistics. More advanced statistical software will be presented. - Course Enrolment Limitations
- The course is also offered to the students of the fields other than those the course is directly associated with.
- fields of study / plans the course is directly associated with
- Mathematical Biology (programme PřF, B-BI)
- Course objectives
- At the end of the course the student will obtain: - overview of usage of R software for statistical analysis - knowledge of decriptive statistics and data visualisation in R software - knowledge of hypothesis testing in R software - knowledge of basic regression modelling in R software - experience in practical data analysis using R software
- Syllabus
- 1. Introduction to R software, basic statistical methods a) Basics of R – history, installation, data loading, data types and structures, function creation, libraries, formatting of outputs, matrix operations b) data visualization – boxplots, histograms, scatter-plots c) data operations, transformation, summary of statistical distributions, correlation coefficients d) Statistical tests – tests of normality, one and two-sample t-test, nonparametric tests e)Analysis of variance. 2. Advanced statistical methods in R a)contingency tables, chi-square test b)linear regression models – estimation of parameters, residual diagnostics, outliers, parameters selection c) generalized linear models – logistic regression, poisson regression d)principal component analysis – eigenvalues. 3. Block based on students requests with possibilities a)analysis of real dataset in R, reporting b) introduction to other software
- Literature
- Zar, J.H.: Biostatistical analysis. New Jersey 1984, Prentice-Hall
- StatSoft, Inc. (2007). Electronic Statistics Textbook. Tulsa, OK: StatSoft. WEB: http://www.statsoft.com/textbook/stathome.html
- www.r-project.org
- Snedecor, G.W., Cochran, W.G.: Statistical methods, Iowa 1971, Iowa State University Press.
- Legendre, P., Legendre, L. (1998) Numerical ecology. Elsevier, 2nd ed.
- ter Braak, C.J.F. (1996). Unimodal models to relace species to environment. DLO-Agricultural Mathematics Group, Wageningen Flury, B., Riedwyl, H. (1988) Multivariate statistics. A practical approach. Chapman and Hall, London.
- Teaching methods
- Practical training using computers
- Assessment methods
- Individual projects on correct application of statistical methods on example data
- Language of instruction
- Czech
- Further comments (probably available only in Czech)
- The course is taught annually.
- Enrolment Statistics (recent)