Publication Records

SAKAMOTO, Tomoaki, Shuka IKEMATSU, Hokuto NAKAYAMA, Terezie MALÍK MANDÁKOVÁ, Gholamreza GOHARI, Takuya SAKAMOTO, Gaojie LI, Hongwei HOU, Sachihiro MATSUNAGA, Martin LYSÁK and Seisuke KIMURA. A chromosome-level genome assembly for the amphibious plant <i>Rorippa aquatica</i> reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications Biology. BERLIN: Nature Research, 2024, vol. 7, No 1, p. 1-14. ISSN 2399-3642. Available from: https://dx.doi.org/10.1038/s42003-024-06088-7.

MAKOVICKÝ, Peter, Edita JEKLOVÁ, Břetislav LIPOVÝ, Filip RAŠKA, Martin KNOZ, Rea JAROSOVA, Šárka KOBZOVÁ, Lukáš VACEK, Adam NOREK and Lubomír JANDA. A scoring system for histological evaluation of skin during Staphylococcus aureus infections. Biologia. New York: Springer, 2024, vol. 79, No 3, p. 917-925. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-023-01567-4.

HRADISKÁ, Helena, Martin KUREČKA, Jan BERÁNEK, Guglielmo TEDESCHI, Vladimír VIŠŇOVSKÝ, Aleš KŘENEK and Vojtěch SPIWOK. Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics. The Journal of Physical Chemistry B. 2024. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.3c05669.

BARTOŠÍK, Martin, Ludmila MORÁŇOVÁ, Nasim IZADI, Johana STRMISKOVÁ, Ravery Jovinary SEBUYOYA, Jitka HOLČÁKOVÁ and Roman HRSTKA. Advanced technologies towards improved HPV diagnostics. Journal of Medical Virology. Wiley, 2024, vol. 96, No 2, p. 1-16. ISSN 0146-6615. Available from: https://dx.doi.org/10.1002/jmv.29409.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jakub ČILLÍK, Lucie NOVOTNÁ and Adrián ROŠINEC. AlphaFind. 2024. Available from: https://dx.doi.org/10.5281/zenodo.11085862.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Jakub ČILLÍK, Miriama JÁNOŠOVÁ, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In Elixir All-Hands 2024. 2024. Available from: https://dx.doi.org/10.7490/f1000research.1119872.1.

GREŠOVÁ, Katarína, Pavlína ŠPRINGEROVÁ, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In ECCB2024. 2024.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome. bioRxiv, 2024.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Katarína GREŠOVÁ, Jaroslav OĽHA, Vlastislav DOHNAL, Adrián ROŠINEC and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome – data and model. 2024. Available from: https://dx.doi.org/10.48700/datst.d35zf-1ja47.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: discover structure similarity across the proteome in AlphaFold DB. Nucleic acids research. Oxford: Oxford University Press, 2024, vol. 52, July 5, p. W182-W186, 5 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae397.

PAJTINKA, Peter and Robert VÁCHA. Amphipathic Helices Can Sense Both Positive and Negative Curvatures of Lipid Membranes. Journal of physical chemistry letters. Washington DC: AMER CHEMICAL SOC1155 16TH ST, NW, WASHINGTON, DC 20036, 2024, vol. 15, No 1, p. 175-179. ISSN 1948-7185. Available from: https://dx.doi.org/10.1021/acs.jpclett.3c02785.

JAUREGUI, Gretsen Velezmoro, Dragana VUKIĆ, Isaac G ONYANGO, Carlos ARIAS, Jan S NOVOTNY, Katerina TEXLOVA, Shanshan WANG, Kristina Locker KOVACOVICOVA, Natalie POLAKOVA, Jana ZELINKOVA, Maria CARNA, Valentina LACOVICH STRAŠIL, Brian P HEAD, Daniel HAVAS, Martin MISTRIK, Robert ZOREC, Alexei VERKHRATSKY, Liam KEEGAN, Mary Anne O'CONNELL, Robert RISSMAN and Gorazd B STOKIN. Amyloid precursor protein induces reactive astrogliosis. Acta Physiologica. Hoboken: Wiley, 2024, vol. 240, No 6, p. 1-17. ISSN 1748-1708. Available from: https://dx.doi.org/10.1111/apha.14142.

SINIGAGLIA, Ketty, Anna CHERIAN, Qiupei DU, Valentina LACOVICH STRAŠIL, Dragana VUKIĆ, Janka MELICHEROVÁ, Pavla MUSILOVÁ, Lisa ZERAD, Stanislav STEJSKAL, Radek MALIK, Jan PROCHAZKA, Nadege BONDURAND, Radislav SEDLACEK, Mary Anne O'CONNELL and Liam KEEGAN. An ADAR1 dsRBD3-PKR kinase domain interaction on dsRNA inhibits PKR activation. Cell Reports. CAMBRIDGE: Cell Press, 2024, vol. 43, No 8, p. 1-25. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2024.114618.

VOLÁNEK, Jiří, Petra TREMBECKÁ and Petr KUBÁŇ. Analysis of Biothiols in Non-Invasive Samples by Capillary Electrophoresis with Laser Induced Fluorescence and Amine Group Derivatization. In 3rd European Sample Preparation Conference and 2nd Green and Sustainable Analytical Chemistry Conference. Chania-Crete: Technical university of Crete, 2024. 2024. ISBN 978-618-5558-09-3.

VACEK, Lukáš, Marko ŠEFRANKO, Antonín PAVELKA, Lubomír JANDA and Filip RŮŽIČKA. Antimicrobial Efficacy of Cathelicidin Peptides on Multidrug-Resistant Pseudomonas aeruginosa Strains. In IUMS 2024 (International Union of Microbiological Societies). 2024.

GÁBOROVÁ, Mária, Máté VÁGVÖLGYI, Bizhar Ahmed TAYEB, Renáta MINORICS, István ZUPKÓ, Ondřej JURČEK, Szabolcs BÉNI, Renata KUBÍNOVÁ, György Tibor BALOGH and Attila HUNYADI. Antiproliferative diterpenes from three Plectranthus s.l. species. 2024.

RADASZKIEWICZ, Katarzyna Anna, Pavla KOLÁŘOVÁ, Tomasz Witold RADASZKIEWICZ, Petra PACLÍKOVÁ, Kristína GÖMÖRYOVÁ, Tomáš BÁRTA, Kateřina HANÁKOVÁ, Zbyněk ZDRÁHAL and Jakub HARNOŠ. Armed with PRICKLE(3)s: PCP complexes protection against RNF43. In Wnt Meeting 2024 - Heidelberg. 2024.

LIPOVÝ, Břetislav, Lukáš VACEK, Jakub HOLOUBEK, Dominika MATYSKOVÁ, Martin KNOZ, Vladimír VÁŇA, Eva ČERNÁ, Jana BRTNÍKOVÁ, Šárka KOBZOVÁ, Antonín PAVELKA, Edita JEKLOVÁ, Peter MAKOVICKÝ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Biomateriály a biotechnologie v postantibiotické éře. 2024. ISBN 978-80-01-07334-6.

DOLNIKOVA, Alexandra, Dmitry KAZANTSEV, Magdalena KLANOVA, Eva POKORNA, Dana SOVILJ, Cristina Daniela KELEMEN, Liliana TUSKOVA, Eva HOFERKOVÁ, Marek MRÁZ, Karel HELMAN, Nikola CURIK, Katerina MACHOVA POLAKOVA, Ladislav ANDĚRA, Marek TRNĚNÝ and Pavel KLENER. Blockage of BCL-XL overcomes venetoclax resistance across BCL2-positive lymphoid malignancies irrespective of BIM status. Blood advances. AMSTERDAM: ELSEVIER, 2024, vol. 8, No 13, p. 1-12. ISSN 2473-9529. Available from: https://dx.doi.org/10.1182/bloodadvances.2024012906.

ELOY, Povedano, Ruiz-Valdepeñas Montiel VÍCTOR, Ravery Jovinary SEBUYOYA, M. Torrente-Rodríguez REBECA, Maria GARRANZO-ASENSIO, Ana MONTERO-CALLE, José M. PINGARRÓN, Rodrigo BARDERAS, Martin BARTOSIK and Susana CAMPUZANO. Bringing to Light the Importance of the miRNA Methylome in Colorectal Cancer Prognosis Through Electrochemical Bioplatforms. Analytical Chemistry. American Chemical Society, 2024, vol. 96, No 11, p. 4580-4588. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.3c05474.

YURENKO, Yevgen, Jan NOVOTNÝ, Radek MAREK and Jiří KOZELKA. Catalytic Mechanism of Formate Dehydrogenase: Does Rotation of Formate Provide the Impetus for Surmounting the Activation Energy Barrier? ChemistrySelect. Wiley-VCH, 2024, vol. 9, No 39, p. e202402979, 11 pp. ISSN 2365-6549. Available from: https://dx.doi.org/10.1002/slct.202402979.

PLAČKOVÁ, Klára, Petr BUREŠ, Martin LYSÁK and František ZEDEK. Centromere drive may propel the evolution of chromosome and genome size in plants. Annals of Botany. Oxford: Oxford University Press, 2024, 10 pp. ISSN 0305-7364. Available from: https://dx.doi.org/10.1093/aob/mcae149.

HOŠKOVÁ, Kateřina, Šárka FAJTLOVÁ, Pavel PLEVKA, Michal MIKL, Milan EŠNER, Radka SVOBODOVÁ and Boris TICHÝ. CF Day 2023. 2024.

LAPČÍK, Petr, Damián LIPTÁK, David POTĚŠIL, Zbyněk ZDRÁHAL and Pavel BOUCHAL. Comparison of phosphopeptide enrichment and LC-MS/MS acquisition methods to study cancer phosphoproteome. In In Book of Abstracts of 23rd Human Proteome Organization World Congress, Dresden, Germany 20.10.-24.10.2024, P-I-0026. 2024.

JAROŠOVÁ, Markéta, František LORENC, Jan BEDRNÍČEK, Eva PETRÁSKOVÁ, Marie BJELKOVÁ, Veronika BÁRTOVÁ, Eva JAROŠOVÁ, Zbyněk ZDRÁHAL, Jan KYSELKA, Pavel SMETANA, Jaromír KADLEC, Adéla STUPKOVÁ and Jan BÁRTA. Comparison of Yield Characteristics, Chemical Composition, Lignans Content and Antioxidant Potential of Experimentally Grown Six Linseed (Linum usitatissimum L.) Cultivars. PLANT FOODS FOR HUMAN NUTRITION. NETHERLANDS: SPRINGER, 2024, vol. 79, No 1, p. 159-165. ISSN 0921-9668. Available from: https://dx.doi.org/10.1007/s11130-023-01136-9.

MABRY, Makenzie E, R Shawn ABRAHAMS, Ihsan A AL-SHEHBAZ, William J BAKER, Simon BARAK, Michael S BARKER, Russell L BARRETT, Aleksandra BERIC, Samik BHATTACHARYA, Sarah B CAREY, Gavin C CONANT, John G CONRAN, Maheshi DASSANAYAKE, Patrick P EDGER, Jocelyn C HALL, Yue HAO, Kasper P HENDRIKS, Julian M HIBBERD, Graham J KING, Daniel J KLIEBENSTEIN, Marcus A KOCH, Ilia J LEITCH, Frederic LENS, Martin LYSÁK, Alex C MCALVAY, Michael T W MCKIBBEN, Francesco MERCATI, Richard C MOORE, Klaus MUMMENHOFF, Daniel J MURPHY, Lachezar A NIKOLOV, Michael PISIAS, Eric H ROALSON, M Eric SCHRANZ, Shawn K THOMAS, Qingyi YU, Alan YOCCA, J Chris PIRES and Alex E HARKESS. Complementing model species with model clades. Plant Cell. Oxford University Press, 2024, vol. 2023, Jan, p. 1-22. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koad260.

DEB, Rahul, Marcelo D T TORRES, Miroslav BOUDNÝ, Marketa KOBERSKA, Floriana CAPPIELLO, Miroslav POPPER, Katerina DVORAKOVA BENDOVA, Martina DRABINOVÁ, Adelheid HANACKOVA, Katy JEANNOT, Milos PETRIK, Maria Luisa MANGONI, Gabriela BALIKOVA NOVOTNA, Marek MRÁZ, Cesar DE LA FUENTE-NUNEZ and Robert VÁCHA. Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities. Journal of Medicinal Chemistry. Washington: American Chemical Society, 2024, vol. 67, No 16, p. 14040-14061. ISSN 0022-2623. Available from: https://dx.doi.org/10.1021/acs.jmedchem.4c00912.

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ and Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae453.

YAMOUNE, Amel, Markéta ŽĎÁRSKÁ, Thomas DEPAEPE, Anna RUDOLFOVÁ, Jan SKALÁK, Kenneth Wayne BERENDZEN, Virtudes MIRA-RODADO, Michael FITZ, Blanka PEKÁROVÁ, Katrina Leslie MALÁ, Paul TARR, Eliška ŠPAČKOVÁ, Lucia TOMOVIČOVÁ, Barbora PARIZKOVA, Abigail FRANCZYK, Ingrid KOVÁČOVÁ, Vladislav DOLGIKH, Elena ZEMLYANSKAYA, Markéta PERNISOVÁ, Ondrej NOVAK, Elliot MEYEROWITZ, Klaus HARTER, Dominique VAN DER STRAETEN and Jan HEJÁTKO. Cytokinins regulate spatially specific ethylene production to control root growth in Arabidopsis. 2024. Available from: https://dx.doi.org/10.1016/j.xplc.2024.101013.

SVOBODA, Tomáš, Jakub ČILLÍK, Michal MIKL, Tomáš SLAVÍČEK and Radka SVOBODOVÁ. Data Management and FAIRification in MAFIL. In Czech‐BioImaging Annual Scientific Conference 2024: Imaging Principles of Life. 2024.

SVOBODA, Tomáš and Adrián ROŠINEC. Data workflows at CEITEC MU. In Setkání OS metodiků MU. 2024.

MARTINEK, Vlastimil, Jessica MARTIN, Cedric BELAIR, Matthew J PAYEA, Sulochan MALLA, Panagiotis ALEXIOU and Manolis MARAGKAKIS. Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics. NAR Genomics and Bioinformatics. Oxford University Press (OUP), 2024, Vol. 6, Issue 3. Available from: https://dx.doi.org/10.1093/nargab/lqae116.

KITOKA, Kristine, Alons LENDS, Gytis KUČINSKAS, Anna Lina BULA, Lukas KRASAUSKAS, Vytautas SMIRNOVAS, Monika ZILKOVA, Branislav KOVACECH, Rostislav SKRABANA, Jozef HRITZ and Kristaps JAUDZEMS. dGAE(297-391) Tau Fragment Promotes Formation of Chronic Traumatic Encephalopathy-Like Tau Filaments. Angewandte Chemie International Edition. WEINHEIM (GERMANY): Verlag Chemie, 2024, 8 pp. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202407821.

RYBNIKÁŘ, Michal, Milan MALANÍK, Karel ŠMEJKAL, Emil ŠVAJDLENKA, Polina SHPET, Pavel BABICA, Stefano DALL´ACQUA, Ondřej SMIŠTÍK, Ondřej JURČEK and Jakub TREML. Dibenzocyclooctadiene Lignans from Schisandra chinensis with Anti-Inflammatory Effects. International Journal of Molecular Sciences. BASEL: MDPI, 2024, vol. 25, No 6, p. 1-16. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms25063465.

ŠEDO, Ondrej, Alena ROBLÍČKOVÁ, František JEŽEK, Petr GINTAR, Josef KAMENÍK and Zbyněk ZDRÁHAL. Discriminatory power of MALDI-TOF MS protein profiling analysis of pork meat and meat products. FOOD CHEMISTRY. ENGLAND: ELSEVIER SCI LTD, 2024, vol. 449, AUG, p. 1-11. ISSN 0308-8146. Available from: https://dx.doi.org/10.1016/j.foodchem.2024.139155.

GÁBOROVÁ, Mária, Mate VAGVOLGYI, Bizhar Ahmed TAYEB, Renata MINORICS, Istvan ZUPKO, Ondřej JURČEK, Szabolcs BENI, Renata KUBÍNOVÁ, Gyorgy Tibor BALOGH and Attila HUNYADI. Diterpenes Isolated from Three Different Plectranthus Sensu Lato Species and Their Antiproliferative Activities against Gynecological and Glioblastoma Cancer Cells. ACS Omega. WASHINGTON: American Chemical Society, 2024, vol. 9, No 16, p. 18495-18504. ISSN 2470-1343. Available from: https://dx.doi.org/10.1021/acsomega.4c00800.

MUCINA, Ladislav, Klaus MUMMENHOFF, Pieter WINTER, van Niekerk ADRIAAN, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Drought and life-history strategies in Heliophila (Brassicaceae). New Phytologist. HOBOKEN: Blackwell Science, 2024, vol. 241, No 2, p. 532-534. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19352.

STRMISKOVÁ, Johana, Nasim IZADI, Milan ANTON, Ludmila MORÁŇOVÁ and Martin BARTOŠÍK. ELECTROCHEMICAL BIOASSAY FOR DETECTION OF HUMAN PAPILLOMAVIRUS ONCOGENIC ACTIVITY. In The Eleventh International Workshop on Biosensors. 2024.

STRMISKOVÁ, Johana, Nasim IZADI, Milan ANTON, Ludmila MORÁŇOVÁ and Martin BARTOŠÍK. ELECTROCHEMICAL BIOASSAY FOR DETECTION OF HUMAN PAPILLOMAVIRUS ONCOGENIC ACTIVITY. In The Eleventh International Workshop on Biosensors. 2024.

FRÖHLICH, Jan, Niccolo LIORNI, Manuel MANGONI, Gabriela LOCHMANOVÁ, Pavlína PÍREK, Nikola KAŠTÁNKOVÁ, Pille PATA, Jan KUČERA, George N CHALDAKOV, Anton B TONCHEV, Illar PATA, Vera GORBUNOVA, Eric LEIRE, Zbyněk ZDRÁHAL, Tommaso MAZZA and Manlio VINCIGUERRA. Epigenetic and transcriptional control of adipocyte function by centenarian-associated SIRT6 N308K/A313S mutant. CLINICAL EPIGENETICS. LONDON: BMC, 2024, vol. 16, No 1, p. 1-17. ISSN 1868-7075. Available from: https://dx.doi.org/10.1186/s13148-024-01710-1.

RUDOLF, Jiří, Lucia TOMOVIČOVÁ, Klára PANZAROVÁ, Jiří FAJKUS, Jan HEJÁTKO and Jan SKALÁK. Epigenetics and plant hormone dynamics: a functional and methodological perspective. Journal of Experimental Botany. ENGLAND: OXFORD UNIV PRESS, 2024. ISSN 0022-0957.

SLANINÁKOVÁ, Terézia, Katarína GREŠOVÁ, David PROCHÁZKA, Viktória SPIŠAKOVÁ, Adrián ROŠINEC, Jakub ČILLÍK, Pavlína ŠPRINGEROVÁ, Aleš KŘENEK, Vlastislav DOHNAL, Radka SVOBODOVÁ and Matej ANTOL. Fast, structure-based searching in a large-scale protein data repository. In ELIXIR CZ Annual Conference. 2024. Available from: https://dx.doi.org/10.13140/RG.2.2.31355.53281.

NIRO, Francesco, Soraia FERNANDES, Marco CASSANI, Monica APOSTOLICO, Jorge Oliver-De La CRUZ, Daniel PEREIRA DE SOUSA, Stefania PAGLIARI, Vladimir VINARSKY, Zbyněk ZDRÁHAL, David POTĚŠIL, Václav PUSTKA, Giulio POMPILIO, Elena SOMMARIVA, Davide ROVINA, Angela Serena MAIONE, Luca BERSANINI, Malin BECKER, Marco RASPONI and Giancarlo FORTE. Fibrotic extracellular matrix impacts cardiomyocyte phenotype and function in an iPSC-derived isogenic model of cardiac fibrosis. Translational Research. NEW YORK: ELSEVIER SCIENCE INC, 2024, vol. 273, November 2024, p. 58-77. ISSN 1931-5244. Available from: https://dx.doi.org/10.1016/j.trsl.2024.07.003.

ONDRIŠOVÁ, Laura, Václav ŠEDA, Kryštof HLAVÁČ, Petra PAVELKOVÁ, Eva HOFERKOVÁ, Giorgia CHIODIN, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Josef VEČEŘA, Pedro FARIA ZENI, Jan OPPELT, Zuzana KAHOUNOVÁ, Rachel VICHOVA, Karel SOUČEK, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, Martin ŠIMKOVIČ, Filip VRBACKÝ, Daniel LYSÁK, Stacey M. FERNANDES, M.S. DAVIDS, Alba MAIQUES-DIAZ, Stella CHARALAMPOPOULOU, Jose I. MARTIN-SUBERO, Jenifer R. BROWN, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. FoxO1/Rictor axis induces a non-genetic adaptation to Ibrutinib via Akt activation in chronic lymphocytic leukemia. The Journal of Clinical Investigation. 2024. Available from: https://dx.doi.org/10.1172/JCI173770.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Genetic background of Czech myopathy patients. In European Human Genetics Conference (ESHG), Glasgow, United Kingdom. 2024. ISSN 1018-4813.

LAPČÍK, Petr, R. Greg STACEY, David POTĚŠIL, Petr KULHÁNEK, Leonard J. FOSTER and Pavel BOUCHAL. Global interactome mapping reveals pro-tumorigenic interactions of NF-κB in breast cancer. Molecular and Cellular Proteomics. Elsevier, 2024, vol. 23, No 4, p. 1-20. ISSN 1535-9484. Available from: https://dx.doi.org/10.1016/j.mcpro.2024.100744.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. GraSR: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.br8aq-db495.

SVOBODA, Tomáš, Adrián ROŠINEC and Ondřej FILIP. Hands-on experience with big data transfer via iRODS and Onedata. In e-INFRA CZ CONFERENCE 2024. 2024.

VETEŠNÍKOVÁ ŠIMKOVÁ, Andrea, Kristína KŘÍŽOVÁ, Kristýna VOŘÍŠKOVÁ, Lukáš VETEŠNÍK, Václav HEJRET, Lenka GETTOVÁ, Jiří VOREL, Nikol RESLOVÁ and Vojtěch BYSTRÝ. Heterosis versus breakdown in cyprinid hybrids associated with SVCV infection revealed by transcriptome profile analysis of head kidney. Aquaculture. AMSTERDAM: ELSEVIER, 2024, vol. 578, January, p. "740083", 14 pp. ISSN 0044-8486. Available from: https://dx.doi.org/10.1016/j.aquaculture.2023.740083.

CRHA, Radek, Aneta KOZELEKOVÁ, Alena HOFROVÁ, Lucia IĽKOVIČOVÁ, Norbert GAŠPARIK, Pavel KADEŘÁVEK and Jozef HRITZ. Hiding in plain sight: Complex interaction patterns between Tau and 14-3-3zeta protein variants. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. NETHERLANDS: ELSEVIER, 2024, vol. 266, Pt 2, p. 1-14. ISSN 0141-8130. Available from: https://dx.doi.org/10.1016/j.ijbiomac.2024.130802.

ULLAH, Sajid, Klára PANZAROVÁ, Martin TRTÍLEK, Matej LEXA, Vojtěch MÁČALA, Thomas ALTMANN, Kerstin NEUMANN, Jan HEJÁTKO, Markéta PERNISOVÁ and Evgeny GLADILIN. High-throughput spike detection in greenhouse cultivated grain crops with attention mechanisms based deep learning models. Plant Phenomics. AAAS, 2024, vol. 2024, March, p. 1-11. ISSN 2643-6515. Available from: https://dx.doi.org/10.34133/plantphenomics.0155.

ŠIROKÁ, Jitka, Anita AMENT, Václav MIK, Tomáš POSPÍŠIL, Michaela KRALOVÁ, Chao ZHANG, Markéta PERNISOVÁ, Michal KARADY, Vladimíra NOŽKOVÁ, Yuho NISHIZATO, Takuya KAJI, Rina SAITO, Mohamed HTITICH, Kristína FLOKOVÁ, Claus WASTERNACK, Miroslav STRNAD, Minoru UEDA, Ondřej NOVÁK and Federica BRUNONI. Homeostasis of cis-OPDA amide conjugates upon stress responses. Plant Physiology. 2024.

PERNISOVÁ, Markéta. Hormonal Regulation of Plant Regeneration. In Principal Investigator Seminars. 2024.

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IĽKOVIČOVÁ, Lucia, Thomas Peter FELLMETH and Jozef HRITZ. The effect of phosphoserine 324 on the paired helical filaments of tau protein. In Instruct Biennial Structural Biology Conference. 2024.

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APPASAMY, Sri Devan, John BERRISFORD, Romana GÁBOROVÁ, Sreenath NAIR, Stephen ANYANGO, Sergei GRUDININ, Mandar DESHPANDE, David ARMSTRONG, Ivanna PIDRUCHNA, Joseph I. J. ELLAWAY, Grisell Díaz LEINES, Deepti GUPTA, Deborah HARRUS, Mihaly VARADI and Sameer VELANKAR. Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data. Scientific Data. Nature Portfolio, 2023, vol. 10, No 1, p. 1-13. ISSN 2052-4463. Available from: https://dx.doi.org/10.1038/s41597-023-02778-9.

JANDA, Lubomír, Antonín PAVELKA, Břetislav LIPOVÝ, Šárka KOBZOVÁ and Lukáš VACEK. Antibakteriální katelicidiny: naděje nebo slepá cesta k náhradě antibiotik? In III. ČESKO-SLOVENSKÝ KONGRES MEZIOBOROVÉ PŘÍSTUPY V HOJENÍ RAN. 2023. ISBN 978-80-11-04155-7.

VACEK, Lukáš, Michaela KOUŘILOVÁ, Šárka KOBZOVÁ and Lubomír JANDA. Antimicrobial effect of endolysins LYSDERM‐S and LYSDERM‐T1 and endolysin‐ubiquitin combination on methicillin‐resistant Staphylococcus aureus. BIOLOGIA. NEW YORK: SPRINGER, 2023, vol. 78, No 2, p. 601-608. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-022-01282-6.

PUKYŠOVÁ, Vendula, Adria SANS SÁNCHEZ, Jiří RUDOLF, Tomasz NODZYNSKI and Marta ZWIEWKA. Arabidopsis flippase ALA3 is required for adjustment of early subcellular trafficking in plant response to osmotic stress. Journal of Experimental Botany. Oxford: Oxford University Press, 2023, vol. 74, No 17, p. 4959-4977. ISSN 0022-0957. Available from: https://dx.doi.org/10.1093/jxb/erad234.

HOUSER, Josef. ARBRE – Association of Resources for Biophysical Research in Europe. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of CIISB. 2023.

HOUSER, Josef. ARBRE–Association of Resources for Biophysical Research in Europe. In Konference Českého biofyzikálního sdružení. 2023.

ZHANG, Zhengyue. Atomistic Landscape of Opening-Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. 2023.

ZHANG, Zhengyue, Jiří ŠPONER, Giovanni BUSSI, Vojtěch MLÝNSKÝ, Petr ŠULC, Chad R. SIMMONS, Nicholas STEPHANOPOULOS and Miroslav KREPL. Atomistic Picture of Opening–Closing Dynamics of DNA Holliday Junction Obtained by Molecular Simulations. Journal of Chemical Information and Modeling. 1549-960X: American Chemical Society, 2023, vol. 63, No 9, p. 2794-2809. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/acs.jcim.3c00358.

ZAPLETALOVÁ, Martina, Corinne RANCUREL, Benoit INDUSTRI, Marc BARDIN, Kevin LE BRIGAND, Philippe NICOT, Virginie MAGNONE, Aurélie SEASSAU, Pascal BARBRY, David POTĚŠIL, Zbyněk ZDRÁHAL, Michel PONCHET and Jan LOCHMAN. BABA-induced pathogen resistance: a multi-omics analysis of the tomato response reveals a hyper-receptive status involving ethylene. Horticulture Research. Oxford University Press, 2023, vol. 10, No 6, p. 1-14. ISSN 2662-6810. Available from: https://dx.doi.org/10.1093/hr/uhad068.

HOUSER, Josef. Benchmarking in biophysics: Insight from the ARBRE society. In Good Laboratory Practices in Molecular-Scale Biophysics: an ARBRE Symposium. 2023.

MARTINKOVÁ, Petra, Hana KONEČNÁ, Petr GINTAR, Karolína KRYŠTOFOVÁ, David POTĚŠIL, Martin TRTÍLEK and Zbyněk ZDRÁHAL. Benchmarking of Two Peptide Clean-Up Protocols: SP2 and Ethyl Acetate Extraction for Sodium Dodecyl Sulfate or Polyethylene Glycol Removal from Plant Samples before LC-MS/MS. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. MDPI, 2023, vol. 24, No 24, p. "17347", 21 pp. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms242417347.

ROŠINEC, Adrián and Klára MORAVCOVÁ. Beskar Cloud: OpenStack Deployment on Top of Kubernetes. In 12th Iberian Grid Conference. 2023.

HEGER, Dominik, R. GOVINDARAJAN, E. LU, S. EWING, A. LAY-FORTENBERY, X. YUAN, Lukáš VESELÝ, E. MUNSON, L. GATLIN, B. HANCOCK, R. SURYANARAYANAN and E. SHALAEV. Beyond pH: Acid/Base Relationships in Frozen and Freeze-Dried Pharmaceuticals. In Feroz Jameel. Principles and Practices of Lyophilization in Product Development and Manufacturing - AAPS Advances in the Pharmaceutical Sciences Series. 1st ed. Cham: Springer Nature, 2023, p. 39-61. 59. ISBN 978-3-031-12633-8. Available from: https://dx.doi.org/10.1007/978-3-031-12634-5_3.

ŠREIBR, Sara, Jana ILGOVÁ, Pavel DOBEŠ, Jiří VOREL, Jacek MARCINIAK, Jana HURYCHOVÁ, Martin KAŠNÝ and Pavel HYRŠL. Bioactive molecules released by Heterorhabditis bacteriophora in response to various activation materials. In Virtual Nematology Conference 2023. 2023.

LABUDA, Ján, Richard BOWATER, Miroslav FOJTA, Gunter GAUGLITZ, Zdeněk GLATZ, Ivan HAPALA, Jan HAVLIŠ, Ferenc KILAR, Aniko KILAR, Lenka MALINOVSKÁ, Heli M. M. SIREN, Petr SKLÁDAL, Federico TORTA, Martin VALACHOVIČ, Michaela WIMMEROVÁ, Zbyněk ZDRÁHAL and Davin Brynn HIBBERT. Bioanalytical Chemistry. Online. In D. Brynn Hibbert. Compendium of Terminology in Analytical Chemistry. Velká Británie: Royal Society of Chemistry, 2023, p. 512-568. IUPAC Color Books. ISBN 978-1-78262-947-4. Available from: https://dx.doi.org/10.1039/BK9781788012881-00512.

LIPOVÝ, Břetislav, Lukáš VACEK, Šárka KOBZOVÁ, Jakub HOLOUBEK, Filip RAŠKA, Martin KNOZ, Martin HLADÍK, Lucy VOJTOVÁ and Lubomír JANDA. Biobetter enzymes for burn-related wound infection: today’s research for tomorrow’s application. In CZECH – JAPANESE SURGICAL SYMPOSIUM WITH INTERNATIONAL PARTICIPATION. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. Biophysical Screening Workshop & Dianthus hands-on. 2023.

HOUSER, Josef and Tomáš KLUMPLER. Bio-SAXS Practical Course 2023. 2023.

ROŠINEC, Adrián and Klára MORAVCOVÁ. Building OpenStack Cloud with Kubernetes as Undercloud. In EGI Conference 2023. 2023.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Vladimír VÁŇA, Lukáš VACEK, Šárka KOBZOVÁ, Antonín PAVELKA, Eva ČERNÁ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Burn wound infections in the present and future preventive and therapeutic concepts. In 17 th International Conference on Materials and Technologies for Defense and Security. 2023.

KADLČÍK, Marek, Michal ŠTEFÁNIK, Ondřej SOTOLÁŘ and Vlastimil MARTINEK. Calc-X and Calcformers: Empowering Arithmetical Chain-of-Thought through Interaction with Symbolic Systems. Online. In Houda Bouamor, Juan Pino, Kalika Bali. Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing: Main track. Singapore: Association for Computational Linguistics, 2023, p. 12101-12108. ISBN 979-8-89176-060-8. Available from: https://dx.doi.org/10.18653/v1/2023.emnlp-main.742.

HOUSER, Josef, Michaela WIMMEROVÁ and Kristýna HROMÁDKOVÁ. CalScreener Workshop: Calorimetric instrument to measure the metabolic response in biological systems. 2023.

VALENTOVÁ, Lucie, Tibor FÜZIK, Pavel PLEVKA and Jakub POSPÍŠIL. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XXVIII Biennial Conference on Phage/Virus Assembly. 2023.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB. 2023.

KOZELKA, Jiří, Yevgen YURENKO, Jan NOVOTNÝ and Radek MAREK. Catalytic Mechanism of Formate Dehydrogenase: Computational Studies. In 14th EBSA Congress. 2023. ISSN 0175-7571.

TIMOFEYENKO, Kseniya, Dzmitry KANAVALAU, Panagiotis ALEXIOU, Maria KALYNA and Kamil RŮŽIČKA. CATSNAP: a user-friendly algorithm for determining the conservation of protein variants reveals extensive parallelisms in the evolution of alternative splicing. New Phytologist. Wiley, 2023, vol. 238, No 4, p. 1722-1732. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18799.

HOUSER, Josef and Kateřina HOŠKOVÁ. CEITEC: project-based financing of core facilities. In 2023 Core Technologies for Life Sciences. 2023.

VÁŇOVÁ, Tereza, Jiří SEDMÍK, Jan RAŠKA, Kateřina AMRUZ ČERNÁ, Petr TAUŠ, Veronika POSPÍŠILOVÁ, Markéta NEZVEDOVÁ, Veronika FEDOROVÁ, Soňa KADÁKOVÁ, Hana KLÍMOVÁ, Michaela CAPANDOVÁ, Petra ORVISKÁ, Petr FOJTÍK, Simona BÁRTOVÁ, Karla PLEVOVÁ, Zdeněk SPÁČIL, Hana HŘÍBKOVÁ and Dáša BOHAČIAKOVÁ. Cerebral organoids derived from patients with Alzheimer´s disease with PSEN1/2 mutations have defective tissue patterning and altered development. CELL REPORTS. CAMBRIDGE: CELL PRESS, 2023, vol. 42, No 11, p. 1-27. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.113310.

REIGL, Tomáš, Veronika NAVRKALOVÁ, Jakub Paweł PORC, Karol PÁL, Kamila STRÁNSKÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. CLLue: Searching for connections among clinical, biological, and molecular features in the dataset of leukemia patients. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Jakub Paweł PORC, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Boris TICHÝ, Nicolas BLAVET, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Clonal competition and disrupted molecular processes in chronic lymphocytic leukemia. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-048-2.

SVOBODA, Tomáš, Aleš KŘENEK, Łukasz OPIOŁA, Andrea MANZI and Josef HANDL. Cloudification of scientific experimental data using Onedata. In EGI Conference 2023. 2023.

HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Jan VERNER, Miroslav BOUDNÝ, Gabriela MLADONICKÁ PAVLASOVÁ, Tomáš LOJA, Daniel FILIP, Josef VEČEŘA, Květoslava MATULOVÁ, Hana SKUHROVÁ FRANCOVÁ, Sonali SHARMA, Laura ONDRIŠOVÁ, Veronika PALUŠOVÁ, Lucy VOJTOVÁ, Leoš KŘEN, Michael DOUBEK and Marek MRÁZ. Coculture model with CD40L, IL4 and IL21 for study chronic lymphocytic leukemia proliferation. In CEITEC PhD Conference 2023, Brno. 2023.

JURÁČEK, Jaroslav, Marie MĄDRZYK, Karolína TRACHTOVÁ, Michaela RUČKOVÁ, Júlia BOHOŠOVÁ, Dominik A. BARTH, Martin PICHLER, Michal STANÍK and Ondřej SLABÝ. Combination of Urinary MiR-501 and MiR-335 With Current Clinical Diagnostic Parameters as Potential Predictive Factors of Prostate Biopsy Outcome. CANCER GENOMICS & PROTEOMICS. ATHENS: INT INST ANTICANCER RESEARCH, 2023, vol. 20, No 3, p. 308-316. ISSN 1109-6535. Available from: https://dx.doi.org/10.21873/cgp.20383.

KUSOVÁ, Alžbeta, Lenka STEINBACHOVÁ, Tereza PŘEROVSKÁ, Lenka ZÁVESKÁ DRÁBKOVÁ, Jan PALEČEK, Ahamed KHAN, Gabriela RIGÓOVÁ, Zuzana GADIOU, Claire JOURDAIN, Tino STRICKER, Daniel SCHUBERT, David HONYS and Petra PROCHÁZKOVÁ SCHRUMPFOVÁ. Completing the TRB family: newly characterized members show ancient evolutionary origins and distinct localization, yet similar interactions. Plant Molecular Biology. Springer, 2023, vol. 112, 1-2, p. 61-83. ISSN 0167-4412. Available from: https://dx.doi.org/10.1007/s11103-023-01348-2.

BRYJOVÁ, Lenka, Eva ONDROUŠKOVÁ, Kateřina ČÁBELOVÁ, Jiří ŠMEJKAL, Petra ŠMUHAŘOVÁ, Jana KOTAŠKOVÁ, Andrea MAREČKOVÁ, Michaela BOHÚNOVÁ, Ivana JEŽÍŠKOVÁ, A. FOLTA, Dagmar SMITALOVÁ, Michael DOUBEK, Barbora WEINBERGEROVÁ, Libor ČERVINEK, Anna PANOVSKÁ, Daniela ŽÁČKOVÁ and Marie JAROŠOVÁ. Complex cytogenomic and molecular biological analysis of the tumor genome of patients with myeloid mylignancies with a focus on targeted analysis of the MECOM gene. In EHA-SWG Scientific Meeting on MDS/MPN/AML: Commonalities and Differences of Myeloid Neoplasms, Budapest, Maďarsko. 2023.

LASORSA, Alessia, Krishnendu BERA, Idir MALKI, Elian DUPRE, Francois-Xavier CANTRELLE, Hamida MERZOUGUI, Davy SINNAEVE, Xavier HANOULLE, Jozef HRITZ and Isabelle LANDRIEU. Conformation and Affinity Modulations by Multiple Phosphorylation Occurring in the BIN1 SH3 Domain Binding Site of the Tau Protein Proline-Rich Region. Biochemistry. Washington: American Chemical Society, 2023, vol. 62, No 11, p. 1631-1642. ISSN 0006-2960. Available from: https://dx.doi.org/10.1021/acs.biochem.2c00717.

BÍŇOVSKÝ, Ján, Marta ŠIBOROVÁ, Jiří NOVÁČEK, Karel ŠKUBNÍK, Tibor BOTKA, Martin BENEŠÍK, Roman PANTŮČEK, MARK VAN RAAIJ and Pavel PLEVKA. Conformational changes in baseplate required for genome delivery of S. aureus phage phi812. In 2nd Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora, Czech Chemical Society Symposium Series vol. 21, no. 5, s. 177-256. 2023. ISSN 2336-7210.

BERA, Krishnendu, Isabelle LANDRIEU and Jozef HRITZ. Conformational changes upon phosphorylation of proline rich region of tau(210-240) peptide using molecular dynamic simulation. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology), Nove Hrady, South Bohemia, 23-25 March 2023. 2023.

BUČEKOVÁ, Gabriela, Viktoriia DOSHCHENKO, Vladimír HORSKÝ and Radka SVOBODOVÁ. Conformational study of small carbon rings in ligands. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

PESCHELOVÁ, Helena, Veronika MANČÍKOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 technology as a useful tool in the study of chornic lymphocytic leukemia. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.

PESCHELOVÁ, Helena, Veronika KOZLOVÁ, Veronika MANČÍKOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 technology as a useful tool in the study of chronic lymphocytic leukemia. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

HOUSER, Josef. Crystallography Loops: Handling and Maintenance. 2023.

WLODZIMIERZ, Piotr, Fernando A RABANAL, Robin BURNS, Matthew NAISH, Elias PRIMETIS, Alison SCOTT, Terezie MALÍK MANDÁKOVÁ, Nicola GORRINGE, Andrew J TOCK, Daniel HOLLAND, Katrin FRITSCHI, Anette HABRING, Christa LANZ, Christie PATEL, Theresa SCHLEGEL, Maximilian COLLENBERG, Miriam MIELKE, Magnus NORDBORG, Fabrice ROUX, Gautam SHIRSEKAR, Carlos ALONSO-BLANCO, Martin LYSÁK, Polina Y NOVIKOVA, Alexandros BOUSIOS, Detlef WEIGEL and Ian R HENDERSON. Cycles of satellite and transposon evolution in <i>Arabidopsis</i> centromeres. Nature. BERLIN: NATURE PORTFOLIO, 2023, vol. 618, No 7965, p. 1-34. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-023-06062-z.

ONDROUŠKOVÁ, Eva, Terezie FITZOVÁ, Lenka BRYJOVÁ, Petra ŠMUHAŘOVÁ, Anna PANOVSKÁ, Michael DOUBEK and Marie JAROŠOVÁ. Cytogenetický screening pacientů s chronickou lymfocytární leukémií léčených inhibitorem Brutonovy tyrozinkinázy. In 56. Výroční cytogenomická konference, Ostrava. 2023.

ŠMERINGAI, Ján, Petra PROCHÁZKOVÁ SCHRUMPFOVÁ and Markéta PERNISOVÁ. Cytokinins – Regulators of de novo Shoot Organogenesis. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2023, vol. 14, August 2023, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1239133.

DEB, Rahul, Ivo KABELKA, Jan PŘIBYL and Robert VÁCHA. De novo design of peptides that form transmembrane barrel pores killing antibiotic resistant bacteria. In BPS Annual Meeting 2023. 2023.

PROCHÁZKOVÁ, Dagmar, Romana BORSKÁ, Jan CHRASTINA, Lenka FAJKUSOVÁ, Petra KONEČNÁ, Kateřina SLABÁ, Jan ŠENKYŘÍK, Karolína PEŠKOVÁ, Petr JABANDŽIEV and Tomáš HONZÍK. Deficit aminoacylázy 1: kazuistika. In 36.pracovní dny-dědičné metabolické poruchy, Znojmo, 3.5.-5.5.2023. 2023. ISBN 978-80-7471-449-8.

., Indu, Jozef HRITZ, Václav BRÁZDA, Rajesh KUMAR and Krishnendu BERA. Designing of Insecticides Against Bemisia tabaci targeting ecdysone receptor. In BERA, Krishnendu. 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

BLASCO, Sofia, Lukáš SUKENÍK and Robert VÁCHA. Designing spheroidal nanoparticles to induce membrane fusion of liposomes. In EMBO Workshop Mechanisms of membrane fusion 2023. 2023.

KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Nicola SALVI, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE and Fabien FERRAGE. Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry. In IDP Community F2F/hybrid meeting. 2023.

ZAPLETAL, Vojtěch, Nicola SALVI, Andrea FLAMM, Zuzana JASEŇÁKOVÁ, Dennis KURZBACH, Mateos BORJA, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Jozef HRITZ, Robert KONRAT, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry. 2023.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Detection of multiexon deletions and duplications in genes associated with neuromuscular disorders. In XXII. Setkání biochemiků a molekulárních biologů, Brno. 2023.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Vladimír VÁŇA, Lukáš VACEK, Šárka KOBZOVÁ, Antonín PAVELKA, Eva ČERNÁ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Development and testing (old)new antimicrobial substances for topical administration in the 21st century. In 9th Central European Burns congress and 23rd Annual Conference of the Society of Burns Medicine. 2023. ISBN 978-80-89496-24-2.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylations of proteins and cells. In XXIInd Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

ZAPLETAL, David, Karel KUBÍČEK, Petr SVOBODA and Richard ŠTEFL. Dicer structure and function: conserved and evolving features. EMBO reports. Wiley, 2023, vol. 24, No 7, p. 1-13. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.202357215.

MANČÍKOVÁ, Veronika, Michaela PEŠOVÁ, Šárka PAVLOVÁ, Robert HELMA, Kristýna ZÁVACKÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 phosphorylation patterns in chronic lymphocytic leukemia patients are reflected in the activation of circumjacent pathways upon DNA damage. MOLECULAR ONCOLOGY. ENGLAND: WILEY, 2023, vol. 17, No 1, p. 82-97. ISSN 1574-7891. Available from: https://dx.doi.org/10.1002/1878-0261.13337.

PEŠOVÁ, Michaela, Veronika MANČÍKOVÁ, Robert HELMA, Šárka PAVLOVÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jana KOTAŠKOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 Phosphorylation Patterns in Chronic Lymphocytic Leukemia: Where They Come from and How They Affect p53 Function. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

ŠKOLÁKOVÁ, Petra, Martin GAJARSKÝ, Jan PALACKÝ, Denis ŠUBERT, Daniel RENČIUK, Lukáš TRANTÍREK, Jean-Louis MERGNY and Michaela VORLICKOVA. DNA i-motif formation at neutral pH is driven by kinetic partitioning. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2950-2962. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad119.

DOBROVODSKÝ, Daniel and Carmelo DI PRIMO. Do conformational changes contribute to the surface plasmon resonance signal? Biosensors and Bioelectronics. Elsevier, 2023, vol. 232, July, p. 1-9. ISSN 0956-5663. Available from: https://dx.doi.org/10.1016/j.bios.2023.115296.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation. In Inaugural Biochemistry Symposium Puzzles of (Bio)molecular Structure and Dynamics: NMR spectroscopy and complementary approaches. 2023.

NOVOTNÁ, Pavla, Václav BAČOVSKÝ, Muyle ALINE and Roman HOBZA. Dosage compensation mechanism in plants with young sex chromosomes. In The Czech Plant Nucleus Workshop 2023. 2023.

ONDRÁŠKOVÁ, Kateřina, Matouš CWIK, Ondřej HORKÝ, Jitka BERKOVCOVÁ, Jitka HOLČÁKOVÁ, Martin BARTOŠÍK, Tomáš KAZDA, Igor KISS and Roman HRSTKA. Droplet digital PCR analysis of circulating tumor DNA in molecular diagnostics of colorectal cancer patients. 6th Advances in Circulating Tumor Cells: Liquid Biopsy and Precision Oncology: Where do we stand now? In ACTC 2023. Skiathos, Greece, 20.09.2023 - 23.09.2023. Zorg. University of Ahtens; Hellenic Society of Liquid Biopsy. 2023.

SEBUYOYA, Ravery Jovinary, Alejandro VALVERDE, Ludmila MORÁŇOVÁ, Johana STRMISKOVÁ, Roman HRSTKA, Victor RUIZ-VALDEPENAS MONTIEL, José M. PINGARRÓN, Rodrigo BARDERAS, Susana CAMPUZANO and Martin BARTOŠÍK. Dual detection system for cancer-associated point mutations assisted by a multiplexed LNA-based amperometric bioplatform coupled with rolling circle amplification. Sensors and Actuators B: Chemical. Lausanne: Elsevier, 2023, vol. 394, November 2023, p. 1-8. ISSN 0925-4005. Available from: https://dx.doi.org/10.1016/j.snb.2023.134375.

PAULENOVÁ, Eva, Josef HOUSER, Filip MELICHER and Michaela WIMMEROVÁ. Dual specificity of PLL2 lectin. 2023. ISSN 1211-5894.

NAVRKALOVÁ, Veronika, Jana KOTAŠKOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Jakub Paweł PORC, Lenka RADOVÁ, Anna PANOVSKÁ and Šárka POSPÍŠILOVÁ. Dynamics of genomic aberrations in relation to disease activity in untreated patients with chronic lymphocytic leukemia. In 23. Pražské hematologické dny, Praha. 2023.

HEJTMÁNEK, Lukáš, Adrián ROŠINEC and Sebastian LUNA-VALERO. Easy Deployment of Dask and Jupyter Notebooks on Managed Kubernetes. In EGI Conference 2023. 2023.

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HELIA, Ondřej, Barbora MATÚŠOVÁ, Martin LYČKA, Anna HÝSKOVÁ and Miloslava FOJTOVÁ. Effects of extensive chromosomal rearrangements in terms of genetics and epigenetics in Arabidopsis thaliana model plant. In Plant Chromosome Biology Cytogenetics meeting 2023. 2023.

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ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Aleš KŘENEK and Radka SVOBODOVÁ. Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management. In IBERGRID 2023. 2023.

EVIC, Valentina, Ruzica SOIC, Marko MOCIBOB, Mario KEKEZ, Josef HOUSER, Michaela WIMMEROVÁ, Dubravka MATKOVIĆ-ČALOGOVIĆ, Ita GRUIC-SOVULJ, Ivana KEKEZ and Jasmina ROKOV-PLAVEC. Evolutionarily conserved cysteines in plant cytosolic seryl-tRNA synthetase are important for its resistance to oxidation. FEBS Letters. Amsterdam: Elsevier Science, 2023, vol. 597, No 23, p. 2975-2992. ISSN 0014-5793. Available from: https://dx.doi.org/10.1002/1873-3468.14748.

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CHOCHOLOVÁ, Eva, Pavel ROUDNICKÝ, David POTĚŠIL, Dana FIALOVÁ, Karolína KRYŠTOFOVÁ, Eva DROZDOVÁ and Zbyněk ZDRÁHAL. Extraction Protocol for Parallel Analysis of Proteins and DNA from Ancient Teeth and Dental Calculus. Journal of Proteome Research. American Chemical Society, 2023, vol. 22, No 10, p. 3311-3319. ISSN 1535-3893. Available from: https://dx.doi.org/10.1021/acs.jproteome.3c00370.

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HLAVÁČ, Kryštof, Laura ONDRIŠOVÁ, Václav ŠEDA, Eva HOFERKOVÁ, G. CHIODIN, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Pedro FARIA ZENI, Jan OPPELT, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, M. ŠIMKOVIČ, F. VRBACKÝ, Daniel LYSÁK, SM. FERNANDES, MS. DAVIDS, A. MAIQUES-DIAZ, S. CHARALAMPOPOULOU, I. MARTIN-SUBERO, JR. BROWN, Michael DOUBEK, Francesco FORCONI, Jiří MAYER and Marek MRÁZ. Foxo1-Rictor axis mediates adaptive increase in Akt activity and cell survival during BCR inhibitor therapy in chronic lymphocytic leukemia. In Czech Annual Cancer Research Meeting, Olomouc. 2023.

ONDRIŠOVÁ, Laura, Václav ŠEDA, Eva HOFERKOVÁ, G. CHIODIN, Kryštof HLAVÁČ, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Pedro FARIA ZENI, Jan OPPELT, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, M. SIMKOVIC, F. VRBACKÝ, Daniel LYSÁK, SM. FERNANDES, MS. DAVIDS, A. MAIQUES-DIAZ, S. CHARALAMPOPOULOU, JI. MARTIN-SUBERO, JR. BROWN, Michael DOUBEK, F. FORCONI, Jiří MAYER and Marek MRÁZ. FOX01-rictor AXIS induces AKT phosporylation during CLL cell adaptation to BCR inhibitors: Implications for combinatorial therapy. In ICML, Švýcarsko, Lugano. 2023.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry. In ASHG Annual Meeting 2023. 2023.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry and western blot. In XXII. setkání biochemiků a molekulárních biologů. 2023.

HELIA, Ondřej, Barbora MATÚŠOVÁ, Anna HÝSKOVÁ, Martin LYČKA and Miloslava FOJTOVÁ. Genetic and epigenetic consequences of chromosome editing in Arabidopsis thaliana model plant. In The Czech Plant Nucleus Workshop 2023. 2023.

ZÍDKOVÁ, Jana, Tereza KRAMÁŘOVÁ, Johana KOPČILOVÁ, Kamila RÉBLOVÁ, Jana HABERLOVÁ, Radim MAZANEC, Stanislav VOHÁŇKA, Andrea GŘEGOŘOVÁ, Martina LANGOVÁ, Tomáš HONZÍK, Jana ŠOUKALOVÁ, Hana OŠLEJŠKOVÁ, Pavla SOLAŘOVÁ, Emilie VYHNÁLKOVÁ and Lenka FAJKUSOVÁ. Genetic findings in Czech patients with limb girdle muscular dystrophy. Clinical Genetics. Hoboken: Wiley, 2023, vol. 104, No 5, p. 542-553. ISSN 0009-9163. Available from: https://dx.doi.org/10.1111/cge.14407.

BOHÚNOVÁ, Michaela, Lenka BRYJOVÁ, Andrea MAREČKOVÁ, Jakub HYNŠT, Michael DOUBEK, Barbora WEINBERGEROVÁ, Šárka POSPÍŠILOVÁ, Marie JAROŠOVÁ and Jana KOTAŠKOVÁ. Genetické pozadie progresie Ph-negatívnych myeloproliferácií do sekundárnej akútnej myeloidnej leukémie - kazuistika. In 56. Výroční cytogenomická konference, Ostrava. 2023.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation in rituximab-resistant cells. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

MAREČKOVÁ, Andrea, Veronika NAVRKALOVÁ, Michaela BOHÚNOVÁ, Viera HRABČÁKOVÁ, Samuel HRICKO, Tomáš REIGL, Jakub Paweł PORC, Andrea JANÍKOVÁ and Jana KOTAŠKOVÁ. Genomic aberrations detected in circulating tumor DNA from cerebrospinal fluid and plasma of patients with primary and secondary CNS lymphomas with negative flowcytometry. In ICML 2023, Lugano, červen 2023 in Hematological Oncology. 2023.

GREŠOVÁ, Katarína, Vlastimil MARTINEK, David ČECHÁK, Petr ŠIMEČEK and Panagiotis ALEXIOU. Genomic benchmarks: a collection of datasets for genomic sequence classification. BMC Genomic Data. 2730-6844: BMC, 2023, vol. 24, No 1, p. 1-9. ISSN 2730-6844. Available from: https://dx.doi.org/10.1186/s12863-023-01123-8.

KILAR, Agata Magdalena, Petr FAJKUS and Jiří FAJKUS. GERONIMO: A tool for systematic retrieval of structural RNAs in a broad evolutionary context. GigaScience. Oxford University Press, 2023, vol. 12, October 2023, p. 1-9. ISSN 2047-217X. Available from: https://dx.doi.org/10.1093/gigascience/giad080.

HENDRIKS, Kasper P, Christiane KIEFER, Ihsan A AL-SHEHBAZ, C Donovan BAILEY, van Huysduynen Alex HOOFT, Lachezar A NIKOLOV, Lars NAUHEIMER, Alexandre R ZUNTINI, Dmitry A GERMAN, Andreas FRANZKE, Marcus A KOCH, Martin LYSÁK, Oscar TORO-NUNEZ, Baris OZUDOGRU, Vanessa R INVERNON, Nora WALDEN, Olivier MAURIN, Nikolai M HAY, Philip SHUSHKOV, Terezie MALÍK MANDÁKOVÁ, M Eric SCHRANZ, Mats THULIN, Michael D WINDHAM, Ivana RESETNIK, Stanislav SPANIEL, Elfy LY, J Chris PIRES, Alex HARKESS, Barbara NEUFFER, Robert VOGT, Christian BRAUCHLER, Heimo RAINER, Steven B JANSSENS, Michaela SCHMULL, Alan FORREST, Alessia GUGGISBERG, Sue ZMARZTY, Brendan J LEPSCHI, Neville SCARLETT, Fred W STAUFFER, Ines SCHONBERGER, Peter HEENAN, William J BAKER, Felix FOREST, Klaus MUMMENHOFF and Frederic LENS. Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset. Current Biology. CAMBRIDGE: CELL PRESS, 2023, vol. 33, No 19, p. 4052-4075. ISSN 0960-9822. Available from: https://dx.doi.org/10.1016/j.cub.2023.08.026.

PETERKOVÁ, Kateřina, Mark STITCH, Rayhaan Z. BOOTA, Paul A. SCATTERGOOD, Paul I. P. ELLIOTT, Michael TOWRIE, Peter PODBEVŠEK, Janez PLAVEC and Susan J. QUINN. G-Quadruplex Binding of an NIR Emitting Osmium Polypyridyl Probe Revealed by Solution NMR and Time-Resolved Infrared Studies. Chemistry - A European Journal. Wiley, 2023, vol. 29, No 11, p. 1-7. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.202203250.

VOLAKHAVA, Anastasiya, Šárka PAVLOVÁ, Kristýna ZÁVACKÁ, Karol PÁL, Marcela KRZYŽÁNKOVÁ, Hana SYNÁČKOVÁ, Šárka POSPÍŠILOVÁ, Ilgar MAMEDOV and Karla PLEVOVÁ. Hide and seek retroelement activity in hematological malignancies. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

TEANO, Gianluca, Lorenzo CONCIA, Lea WOLFF, Leopold CARRON, Ivona BIOCANIN, Kateřina ADAMUSOVÁ, Miloslava FOJTOVÁ, Michael BOURGE, Amira KRAMDI, Vincent COLOT, Ueli GROSSNIKLAUS, Chris BOWLER, Celia BAROUX, Alessandra CARBONE, Aline V PROBST, Petra PROCHÁZKOVÁ SCHRUMPFOVÁ, Jiří FAJKUS, Simon AMIARD, Stefan GROB, Clara BOURBOUSSE and Fredy BARNECHE. Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. Cell Reports. Elsevier, 2023, vol. 42, No 8, p. 1-23. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.112894.

HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL and Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2818-2837. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad092.

ŠPAČKOVÁ, Anna, Ondřej VÁVRA, Tomáš RAČEK, Václav BAZGIER, David SEHNAL, Jiří DAMBORSKÝ, Radka SVOBODOVÁ and Karel BERKA. ChannelsDB 2.0: A Comprehensive Database of Protein Tunnels and Pores in AlphaFold Era. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

KOMÁRKOVÁ, Marie, Martin BENEŠÍK, Kateřina ROSÍKOVÁ, Tibor BOTKA, Lucie VALENTOVÁ, Pavel PLEVKA, Milada DVOŘÁČKOVÁ, Filip RŮŽIČKA and Roman PANTŮČEK. Characterisation of bacteriophages with therapeutic potential against healthcare-associated and multidrug-resistant Pseudomonas aeruginosa. In Studentská vědecká konference MUNI PHARM 2023. Masarykova univerzita, Brno. 2023.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis. In 19th European Magnetic Resonance Congress, EUROMAR 2023. 2023.

CZUBINSKI, Jaroslaw, Erika LATTOVÁ, Zbyněk ZDRÁHAL and Richard STRASSER. Characteristics of N-Glycosylation and Its Impact on the Molecular Behavior of Lupinus angustifolius ?-Conglutin. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY. UNITED STATES: AMER CHEMICAL SOC, 2023, vol. 71, No 19, p. 7359-7369. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.3c00727.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžbeta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis. Proteins: Structure, Function and Bioinformatics. Wiley, 2023, vol. 91, No 9, p. 1276-1287. ISSN 0887-3585. Available from: https://dx.doi.org/10.1002/prot.26531.

LELKES, Edit, Jitka JEMELKOVÁ, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Radka VÁGNEROVÁ, Eva DVOŘÁK TOMAŠTÍKOVÁ, Aleš PEČINKA, Karel J. ANGELIS and Jan PALEČEK. Characterization of the conserved features of the NSE6 subunit of the Physcomitrium patens PpSMC5/6 complex. PLANT JOURNAL. ENGLAND: WILEY, 2023, vol. 115, No 4, p. 1084-1099. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16282.

JEMELKOVÁ, Jitka, Edit LELKES, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Radka VÁGNEROVÁ, Eva TOMAŠTÍKOVÁ, Aleš PEČINKA, Karel J. ANGELIS and Jan PALEČEK. Characterization of the Physcomitrium patens SMC5/6 complex. In The Czech Plant Nucleus Workshop 2023. 2023.

KUSOVÁ, Alžbeta, Marcela HOLÁ, Ivana GOFFOVÁ, Dagmar ZACHOVÁ, Jiří FAJKUS and Petra PROCHÁZKOVÁ SCHRUMPFOVÁ. Characterization of TRB proteins in the moss Physcomitrium patens. In The Czech Plant Nucleus Workshop 2023. 2023.

SCHINDLER, Ondřej, Karel BERKA, Alessio CANTARA, Aleš KŘENEK, Dominik TICHÝ, Tomáš RAČEK and Radka SVOBODOVÁ. αCharges: partial atomic charges for AlphaFold structures in high quality. Nucleic Acids Research. Oxford: Oxford University Press, 2023, vol. 51, W1, p. "W11"-"W16", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad349.

GOTTUMUKKALA, Narendra Varma, Aneta LEDEREROVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity py preventing CD19 antigen escape in relapsed models. In EHA Meeting – 5th European CAR T-cell Meeting, Rotterdam, Nizozemsko. 2023.

TOUL, Martin, Veronika SLONKOVÁ, Jan MIČAN, Adam Paulin URMINSKÝ, Maria TOMKOVA, Erik SEDLÁK, David BEDNÁŘ, Jiří DAMBORSKÝ, Lenka HERNYCHOVÁ and Zbyněk PROKOP. Identification, characterization, and engineering of glycosylation in thrombolytics. Biotechnology Advances. OXFORD: Elsevier, 2023, vol. 66, September 2023, p. 1-23. ISSN 0734-9750. Available from: https://dx.doi.org/10.1016/j.biotechadv.2023.108174.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Identification of novel targets that upregulate CD20 expression in rituximab-resistant cells with the use of genomewide CRISPR screening. In XX. International Workshop on CLL (iwCLL 2023), Boston, USA. 2023.

LYČKA, Martin, Petr FAJKUS, Leon P. JENNER, Eva SÝKOROVÁ, Miloslava FOJTOVÁ and Vratislav PESKA. Identification of the Sequence and the Length of Telomere DNA. In Tony Heitkam, Sònia Garcia. Plant Cytogenetics and Cytogenomics : Plant Cytogenetics and Cytogenomics. New York: Springer Nature, 2023, p. 285-302. Methods in Molecular Biology. ISBN 978-1-0716-3225-3. Available from: https://dx.doi.org/10.1007/978-1-0716-3226-0_18.

LADUNGOVÁ, Adriana, Daniel BUŠA, Yusuf LODHI, Jan HÝL, Martin ČULEN and Michal ŠMÍDA. Identificationof novel therapeutic options for venetoclax-resistant AML cells through drug repurposing. In 23. Pražské hematologické dny, Praha. 2023.

BROM, Tomáš, Martin STOJASPAL, Tomáš JANOVIČ, Ivona NEČASOVÁ, Pavel VEVERKA and Ctirad HOFR. Insight into inherited anemia CDA-I: disease-associated mutations disrupt Codanin1-CDIN1 complex. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of the Czech Infrastructure for Integrative Structural Biology. 2023.

TREBICHALSKÁ, Zuzana, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In-situ cryo-electron tomography of Enterovirus replication. In In situ structural biology: from cryo-EM to multi-scale modelling. 2023.

BERA, Krishnendu and Jozef HRITZ. Interaction of selected drugs at dimer interface of human 14-3-3ζ protein. In 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

DOBROVODSKÝ, Daniel, Aleš DAŇHEL, Emmanuelle MOTHES-MARTIN, Genevieve PRATVIEL, Daniel RENČIUK, Jean-Louis MERGNY and Miroslav FOJTA. Interfacial behaviour of oligodeoxynucleotides prone to G-quadruplex formation on negatively charged electrode surface monitored by electrochemical probes. Electrochimica Acta. Elsevier, 2023, vol. 442, February, p. 1-8. ISSN 0013-4686. Available from: https://dx.doi.org/10.1016/j.electacta.2023.141878.

DAS, Amiyaranjan, Julia BARTULI, Clemens GRIMM, Utz FISCHER and Gabriel DEMO. INTERPLAY BETWEEN VIRAL TRANSCRIPTION AND HOST TRANSLATION. In NIVB meeting 2023. 2023. ISSN 2336-7210.

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RAČEK, Tomáš, Tomáš SVOBODA and Radka SVOBODOVÁ. Management of life-science data and their metadata. In XXII. setkání biochemiků a molekulárních biologů. 2023.

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BIRIUKOV, Denys, Timothée Emmanuel J. RIVEL and Robert VÁCHA. Multiple factors modulating the formation of toroidal membrane pores. In NIVB MEETING 2023. 2023. ISSN 2336-7202.

MARINI PALOMEQUE, María Victoria, Fedor NIKULENKOV, Pounami SAMADDER, Sissel JUUL, Birgitta R. KNUDSEN and Lumír KREJČÍ. MUS81 cleaves TOP1‑derived lesions and other DNA-protein cross‑links. BMC Biology. London: BMC, 2023, vol. 21, No 1, p. 1-16. ISSN 1741-7007. Available from: https://dx.doi.org/10.1186/s12915-023-01614-1.

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CHYBA, Jan, Anna HRUZÍKOVÁ, Michal KNOR, Petra PIKULOVÁ, Kateřina MARKOVÁ, Jan NOVOTNÝ and Radek MAREK. Nature of NMR Shifts in Paramagnetic Octahedral Ru(III) Complexes with Axial Pyridine-Based Ligands. Inorganic Chemistry. American Chemical Society, 2023, vol. 62, No 8, p. 3381-3394. ISSN 0020-1669. Available from: https://dx.doi.org/10.1021/acs.inorgchem.2c03282.

FARIA ZENI, Pedro, Daniel FILIP, Miroslav BOUDNÝ, Michaela MEDKOVÁ, Libuše JANSKÁ, Androniki MICHAELOU, Laura ONDRIŠOVÁ, Eva HOFERKOVÁ, Josef VEČEŘA, Kryštof HLAVÁČ, Lenka KOŠŤÁLOVÁ, Petra PAVELKOVÁ, Erika BAJUSOVÁ, Péter KACZ, Šárka POSPÍŠILOVÁ, Michael DOUBEK, Jiří MAYER, Václav ŠEDA and Marek MRÁZ. Nekódující RNA v biologii maligních B lymfocytů. (Non-coding RNAs in the biology of malignant B lymphocytes.). In XXVI. Biologické dny, Brno. 2023.

BUĽKOVÁ, Viktória, Jana VARGOVÁ, Marián BABINČÁK, Rastislav JENDŽELOVSKÝ, Zbyněk ZDRÁHAL, Pavel ROUDNICKÝ, Ján KOŠUTH and Peter FEDOROČKO. New findings on the action of hypericin in hypoxic cancer cells with a focus on the modulation of side population cells. Biomedicine and Pharmacotherapy. Elsevier, 2023, vol. 163, July, p. 1-15. ISSN 0753-3322. Available from: https://dx.doi.org/10.1016/j.biopha.2023.114829.

SVOBODOVÁ, Radka, Karel BERKA, Ivana HUTAŘOVÁ VAŘEKOVÁ, Tomáš RAČEK and Ondřej SCHINDLER. New ways of protein family visualization in AlphaFold era. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

PAVELKA, Antonín, Lukáš VACEK, Lubomír JANDA and Filip RŮŽIČKA. Nové možnosti terapie ran infikovaných multirezistentními G– agens pomocí antimikrobiálních peptidů. In Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie. 2023.

PAVELKA, Antonín, Lukáš VACEK, Lubomír JANDA and Filip RŮŽIČKA. Nové možnosti terapie ran infikovaných multirezistentními G– agens pomocí antimikrobiálních peptidů. In Kongres klinické mikrobiologie, infekčních nemocí a epidemiologie. 2023.

RIEVAJOVÁ, Martina, Kateryna KOTSARENKO, Lenka MALINOVSKÁ, Ján ŠTĚRBA and Michaela WIMMEROVÁ. Novel C-type lectin from Ixodes ricinus: a three-domain mystery. In XXII. setkání biochemiků a molekulárních biologů. 2023. ISBN 978-80-280-0409-5.

HOUSER, Josef and Barbora TRUKSOVÁ. Novel Drug Discovery & Delivery systems: Malvern Panalytical Biophysical Characterisation Seminar. 2023.

BURÁŇOVÁ, Tereza, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Novel two-domain lectin from bacterium Photorhabdus laumondii. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-047-5.

ZEMLYANSKAYA, Elena, Viacheslav ZEMLIANSKI, Aleš PĚNČÍK, Dior R. KELLEY, Ykä HELARIUTTA, Ondřej NOVÁK and Kamil RŮŽIČKA. N6-adenosine methylation of mRNA integrates multilevel auxin response and ground tissue development in Arabidopsis. Development. The Company of Biologists Ltd, 2023, vol. 150, No 19, p. 1-11. ISSN 0950-1991. Available from: https://dx.doi.org/10.1242/dev.201775.

KUNC, Martin, Pavel DOBEŠ, Rachel WARD, Saetbyeol LEE, Radim ČEGAN, Silvie DOSTÁLKOVÁ, Kateřina HOLUŠOVÁ, Jana HURYCHOVÁ, Sara ELIÁŠ, Eliška PINĎÁKOVÁ, Eliška ČUKANOVÁ, Jana PRODĚLALOVÁ, Marek PETŘIVALSKÝ, Jiří DANIHLÍK, Jaroslav HAVLÍK, Roman HOBZA, Kevin KAVANAGH and Pavel HYRŠL. Omics-based analysis of honey bee (Apis mellifera) response to Varroa sp. parasitisation and associated factors reveals changes impairing winter bee generation. Insect Biochemistry and Molecular Biology. Elsevier, 2023, vol. 152, January, p. 1-19. ISSN 0965-1748. Available from: https://dx.doi.org/10.1016/j.ibmb.2022.103877.

ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Josef HANDL, Jozef SABO, Aleš KŘENEK and Radka SVOBODOVÁ. Onedata4Sci: Life-science experimental datasets management system. In 3D-BioInfo | ISCB 3D-SIG | ELIXIR Czech Republic Structural Bioinformatics. 2023.

CHOCHOLOVÁ, Eva, Anna ŠENOVSKÁ, Pavel ROUDNICKÝ, Zbyněk ZDRÁHAL, Kristýna BRZOBOHATÁ, Dana FIALOVÁ, Petr KOS and Eva DROZDOVÁ. Palaeoproteomic and Genomic Analyses of Bronze Age Population from Unětice Culture, Moravia, Czech Republic. In 10th Meeting of the International Society for Biomolecular Archaeology, New Horizons in Biomolecular Archaeology. 2023.

KUČINSKAS, Gytis, Hana NEDOZRÁLOVÁ and Tomi GREŇA. Pathological tau protein fibrils – structure and cellular context. In The XIX Discussions in Structural Molecular Biology and the 6th User meeting of CIISB. 2023.

MIDLIK, Adam, Sreenath NAIR, Stephen ANYANGO, Mandar DESHPANDE, David SEHNAL, Mihaly VARADI and Sameer VELANKAR. PDBImages: a command-line tool for automated macromolecular structure visualization. Bioinformatics. Oxford: Oxford University Press, 2023, vol. 39, No 12, p. 1-4. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btad744.

JAHN, Helene, Ladislav BARTOŠ, Grace I. DEARDEN, Jeremy S. DITTMAN, Joost C. M HOLTHUIS, Robert VÁCHA and Anant K. MENON. Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase. Nature Communications. Heidelberger: Nature Research, 2023, vol. 14, No 1, p. 1-16. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-43570-y.

STORCHOVA, Radka, Matouš PALEK, Natálie PALKOVA, Pavel VEVERKA, Tomáš BROM, Ctirad HOFR and Libor MACŮREK. Phosphorylation of TRF2 promotes its interaction with TIN2 and regulates DNA damage response at telomeres. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 3, p. 1154-1172. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac1269.

HLAVATÁ, Kristýna, Jana LEONG-ŠKORNIČKOVÁ, Eliška ZÁVESKÁ, Otakar ŠÍDA, Mark NEWMAN, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Karol MARHOLD and Tomáš FÉR. Phylogenomics and genome size evolution in Amomum s. s. (Zingiberaceae): Comparison of traditional and modern sequencing methods. Molecular Phylogenetics and Evolution. Elsevier, 2023, vol. 178, January, p. 1-14. ISSN 1055-7903. Available from: https://dx.doi.org/10.1016/j.ympev.2022.107666.

BURÁŇOVÁ, Tereza, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Production and characterization of two-domain lectins from Photorhabdus spp. In XXII. Setkání biochemiků a molekulárních biologů. 2023. ISBN 978-80-280-0409-5.

ROBOTKOVÁ, Kateřina, Václav PECŮCH, Jan KOMÁREK and Michaela WIMMEROVÁ. Production of lectins for lectin arrays. In XXIInd Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

KORSÁK, Marek, Josef HOUSER, Juliette DEVOS, Lukáš GAJDOŠ, Pavel DOBEŠ and Michaela WIMMEROVÁ. Production of recombinant lectin PluLec from Photorhabdus luminescens for neutron crystallography and its structure-functional characterization. In XXVIIth Biochemistry Congress of Slovak and Czech Societies for Biochemistry and Molecular Biology with cooperation of Hungarian and Ukrainian Biochemical Societies. 2023. ISBN 978-80-8240-047-5.

ONDRUŠŠEK, Róbert, Barbora KVOKAČKOVÁ, Karolína KRYŠTOFOVÁ, Světlana BRYCHTOVÁ, Karel SOUČEK and Jan BOUCHAL. Prognostic value and multifaceted roles of tetraspanin CD9 in cancer. Frontiers in Oncology. Lausanne: Frontiers Media S.A., 2023, vol. 13, March 2023, p. 1-11. ISSN 2234-943X. Available from: https://dx.doi.org/10.3389/fonc.2023.1140738.

PROCHÁZKOVÁ, Dagmar, Romana BORSKÁ, Petr CHRASTINA, Lenka FAJKUSOVÁ, Petra KONEČNÁ, Kateřina SLABÁ, Jan ŠENKYŘÍK, Karolína PEŠKOVÁ, Petr JABANDŽIEV and Tomáš HONZÍK. První český pacient s deficitem aminoacylázy 1 (The first Czech patient with aminoacylase I deficiency). CESKA A SLOVENSKA NEUROLOGIE A NEUROCHIRURGIE. CZECH REPUBLIC: CZECH MEDICAL SOC, 2023, vol. 86, No 1, p. 83-85. ISSN 1210-7859. Available from: https://dx.doi.org/10.48095/cccsnn202383.

PIKULOVÁ, Petra, Debora MISENKOVA, Radek MAREK, Stanislav KOMOROVSKY and Jan NOVOTNÝ. Quadratic Spin–Orbit Mechanism of the Electronic g-Tensor. Journal of Chemical Theory and Computation. American Chemical Society, 2023, vol. 19, No 6, p. 1765-1776. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/acs.jctc.2c01213.

SPIELVOGEL, Clemens P, Stefan STOIBER, Laszlo PAPP, Denis KRAJNC, Marko GRAHOVAC, Elisabeth GURNHOFER, Karolína TRACHTOVÁ, Vojtěch BYSTRÝ, Asha LEISSER, Bernhard JANK, Julia SCHNOELL, Lorenz KADLETZ, Gregor HEIDUSCHKA, Thomas BEYER, Marcus HACKER, Lukas KENNER and Alexander R HAUG. Radiogenomic markers enable risk stratification and inference of mutational pathway states in head and neck cancer. European Journal of Nuclear Medicine and Molecular Imaging. NEW YORK: SPRINGER, 2023, vol. 50, No 2, p. 546-558. ISSN 1619-7070. Available from: https://dx.doi.org/10.1007/s00259-022-05973-9.

REBROŠOVÁ, Katarína, Silvie BERNATOVÁ, Martin ŠILER, Jan MAŠEK, Ota SAMEK, Jan JEŽEK, Martin KIZOVSKY, Veronika HOLÁ, Pavel ZEMÁNEK and Filip RŮŽIČKA. Rapid Identification of Pathogens Causing Bloodstream Infections by Raman Spectroscopy and Raman Tweezers. Microbiology Spectrum. WASHINGTON: American Society for Microbiology, 2023, vol. 11, No 3, p. 1-15. ISSN 2165-0497. Available from: https://dx.doi.org/10.1128/spectrum.00028-23.

PAPAGEORGIOU, Anna, Michaela POSPÍŠILOVÁ, Jakub CIBULKA, Raghib ASHRAF, Christopher WAUDBY, Pavel KADEŘÁVEK, Volha MAROZ, Karel KUBÍČEK, Zbyněk PROKOP, Lumír KREJČÍ and Konstantinos TRIPSIANES. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase. Nature Communications. Berlin: Nature, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-42503-z.

KLODOVÁ, Božena, David POTĚŠIL, Lenka STEINBACHOVÁ, Christos MICHAILIDIS, Ann-Cathrin LINDNER, Dieter HACKENBERG, Jorg BECKER, Zbyněk ZDRÁHAL, David TWELL and David HONYS. Regulatory dynamics of gene expression in the developing male gametophyte of Arabidopsis. PLANT REPRODUCTION. GERMANY: SPRINGER, 2023, vol. 36, No 3, p. 213-241. ISSN 2194-7953. Available from: https://dx.doi.org/10.1007/s00497-022-00452-5.

VANKOVÁ, Radka, Lenka BURKETOVÁ, Břetislav BRZOBOHATÝ, Martin ČERNÝ, Said HAFIDH, Jan HEJÁTKO, David HONYS, Klára HOYEROVÁ, Michal JUŘÍČEK, Jan MARTINEC, Tomas MORAVEC, Tamara PEČENKOVÁ, Jan PETRÁŠEK, Jiří POSPÍŠIL, Katarzyna RETZER, Helene ROBERT BOISIVON, Helena ŠTORCHOVÁ, Tomáš VANĚK and Viktor ŽÁRSKÝ. Responses to abiotic and biotic stresses - from the cellular level to fruit development - contributions of the Czech Centre for Experimental Plant Biology. Biologia Plantarum. Praha: Institute of Experimental Botany, Czech Academy of Sciences, 2023, vol. 67, No 2023, p. 166-174. ISSN 0006-3134. Available from: https://dx.doi.org/10.32615/bp.2023.028.

MARCINIAK, Jacek, Jana HURYCHOVÁ, Sara ŠREIBR, Pavel HYRŠL and Pavel DOBEŠ. ROLE OF ASCORBIC ACID AND OTHER ANTIOXIDANTS IN HONEY BEE RESISTANCE AND LONGEVITY. In BeeConnected 2023. 2023. ISBN 978-80-11-03089-6.

DVOŘÁK TOMAŠTÍKOVÁ, Eva, Fen YANG, Kristína MLYNÁROVÁ, Said HAFIDH, Šárka SCHOŘOVÁ, Alžbeta KUSOVÁ, Markéta PERNISOVÁ, Tereza PŘEROVSKÁ, Božena KLODOVÁ, David HONYS, Jiří FAJKUS, Ales PECINKA and Petra PROCHÁZKOVÁ SCHRUMPFOVÁ. RUVBL proteins are involved in plant gametophyte development. Plant Journal. Wiley, 2023, vol. 114, No 2, p. 325-337. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16136.

ILGOVÁ, Jana, Sara ŠREIBR, Jiří VOREL, Pavel DOBEŠ, Jana HURYCHOVÁ, Martin KAŠNÝ, Lucie ŠKORPÍKOVÁ and Pavel HYRŠL. Searching for proteins involved in the infection of the entomopathogenic nematode Heterorhabditis bacteriophora. In 27th Helminthological Days. 2023. ISBN 978-80-908308-3-7.

RAŠKA, Filip, Břetislav LIPOVÝ, Šárka KOBZOVÁ, Lukáš VACEK, Rea JAROŠOVÁ, Dominika POLAŠTÍK KLEKNEROVÁ, Peter MAKOVICKÝ, Monika VÍCENOVÁ, Edita JEKLOVÁ, Roman PANTŮČEK and Lubomír JANDA. Skin and soft-tissue infection caused by epidemiologically relevant strains of Staphylococcus aureus in a porcine model. Our concept of development. In 14th Meeting of the European Plastic Surgery Research Council, Geneva, Switzerland. 2023.

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KNIGHT, Andrea, Josef HOUSER, Vilém JURÁŇ, Václav VYBÍHAL, Pavel FADRUS, Martin SMRČKA and Martin PISKÁČEK. Targeting undruggable oncoproteins c-Myc and N-Myc by the 9aaTADs. In Advanced Therapies 2023, 14-15 March 2023, ExCeL, London. 2023.

JEDLIČKA, Pavel, Ivan VANÁT, Matej LEXA, Marie KRÁTKÁ and Eduard KEJNOVSKÝ. TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes. Online. In Workshop on Bioinformatics and Computational Biology (WBCB 2023). 2023, p. 12-12.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Differential scanning fluorimetry demo. 2023.

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MARTIŠOVÁ, Andrea, Petr VOŇKA and Roman HRSTKA. The importance of AGR2 in ER stress regulation and its impact on cancer cells. In Proteostasis: From translation to degradation. 2023.

BEANI POIANI, Silvana, Pavel DOBEŠ, Martin KUNC, Mayara Cristina PEREIRA, Odair Correa BUENO and Pavel HYRŠL. The Influence of Selected Insecticides on the Oxidative Response of Atta sexdens (Myrmicinae, Attini) Workers. Neotropical Entomology. Springer, 2023, vol. 52, No 6, p. 1088-1099. ISSN 1519-566X. Available from: https://dx.doi.org/10.1007/s13744-023-01077-7.

HUANG, Yile, Xinyi GUO, Kang ZHANG, Terezie MALÍK MANDÁKOVÁ, Feng CHENG and Martin LYSÁK. The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora. Plant Journal. Wiley, 2023, vol. 116, No 2, p. 446-466. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16383.

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TREBICHALSKÁ, Zuzana, Tibor FÜZIK, Pavel KŘEPELKA, Jiří NOVÁČEK and Pavel PLEVKA. Towards the identification of Enterovirus replication cycle in situ. In 6th Austrian CRYO-EM SYMPOSIUM. 2023.

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JEDLIČKOVÁ, Veronika, Václav HEJRET, Martin DEMKO, Pavel JEDLIČKA, Marie ŠTEFKOVÁ and Helene ROBERT BOISIVON. Transcriptome analysis of thermomorphogenesis in ovules and during early seed development in Brassica napus. BMC Genomics. London: BioMed Central Ltd, 2023, vol. 24, No 1, p. 1-15. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-023-09316-2.

VACULÍK, Ondřej, Eliška CHALUPOVÁ, Katarína GREŠOVÁ, Tomáš MAJTNER and Panagiotis ALEXIOU. Transfer Learning Allows Accurate RBP Target Site Prediction with Limited Sample Sizes. Biology. MDPI, 2023, vol. 12, No 10, p. 1-19. ISSN 2079-7737. Available from: https://dx.doi.org/10.3390/biology12101276.

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VOLAKHAVA, Anastasiya, Šárka PAVLOVÁ, Kristýna ZÁVACKÁ, Karol PÁL, Ilgar MAMEDOV, Karla PLEVOVÁ and Šárka POSPÍŠILOVÁ. Uncovering retroelement activity in hematological malignancies. In CEITEC PhD Conference, Brno. 2023.

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PÍREK, Pavlína, Karolína KRYŠTOFOVÁ, Ingrid KOVÁČOVÁ, Anna KROMEROVÁ, Dagmar ZACHOVÁ, Ondřej HELIA, Klara PANZAROVA, Jiří FAJKUS, Zbyněk ZDRÁHAL, Gabriela LOCHMANOVÁ and Miloslava FOJTOVÁ. Unraveling Epigenetic Changes in A. thaliana Calli: Impact of HDAC Inhibitors. PLANTS-BASEL. BASEL: MDPI, 2023, vol. 12, No 24, p. 1-16. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants12244177.

PRABHULLACHANDRAN, Unnikannan, Ivana URBÁNKOVÁ, Kateřina MÁCOVÁ, Jan HEJÁTKO and Helene ROBERT BOISIVON. UNRAVELING THE PROCESS OF THERMOREGULATION DURING THE SEED DEVELOPMENT IN BRASSICA NAPUS. 2023.

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ČERMÁK, Milan, Tatiana FRITZOVÁ, Vít RUSŇÁK and Denisa ŠRÁMKOVÁ. Using relational graphs for exploratory analysis of network traffic data. Forensic Science International: Digital Investigation. 2023, vol. 45, S, p. 1-10. ISSN 2666-2825. Available from: https://dx.doi.org/10.1016/j.fsidi.2023.301563.

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PORC, Jakub Paweł, Tomáš REIGL, Veronika NAVRKALOVÁ, Jakub HYNŠT, Karol PÁL, Kamila STRÁNSKÁ, Jana KOTAŠKOVÁ and Šárka POSPÍŠILOVÁ. Web-based bioinformatic tool LYNX: LYmphoid NeXt-generation sequencing data analysis and visualization in hematological malignancies. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

KRUŽLICOVÁ, Jana, Václav BAČOVSKÝ, Markéta BODLÁKOVÁ, Stephen WRIGHT and Roman HOBZA. Weird and wonderful – an origin of sex chromosomes in two races of Rumex hastatulus. In Plant Chromosome Biology Cytogenetics meeting 2023. 2023.

WIMMEROVÁ, Michaela. XXII. setkání biochemiků a molekulárních biologů. Sborník příspěvků (XXII. Meeting of Biochemists and Molecular Biologists. Proceedings). 1st ed. Brno: Masarykova univerzita, 2023. ISBN 978-80-280-0409-5.

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KOZELEKOVÁ, Aneta, Lucia IĽKOVIČOVÁ, Radek CRHA, Alena HOFROVÁ and Jozef HRITZ. 14-3-3 dimer vs monomer – (dis)similarities in Tau protein binding. In EBSA Congress 2023 in Stockholm. 2023. Available from: https://dx.doi.org/10.1007/s00249-023-01668-7.

BAĎUROVÁ, Lucia, Katarína POLČICOVÁ, Božena OMASTA, Ingrid OVEČKOVÁ, Eva KOCIANOVÁ and Jana TOMÁŠKOVÁ. 2-Deoxy-D-glucose inhibits lymphocytic choriomeningitis virus propagation by targeting glycoprotein N-glycosylation. Virology Journal. LONDON: BMC, 2023, vol. 20, No 1, p. 1-18. ISSN 1743-422X. Available from: https://dx.doi.org/10.1186/s12985-023-02082-3.

KLINCOVÁ, Martina, Dagmar ŠTĚPÁNKOVÁ, Ivana SCHRÖDEROVÁ, Eva KLABUSAYOVÁ, Edita OŠŤÁDALOVÁ, Iveta VALÁŠKOVÁ, Lenka FAJKUSOVÁ, Jana ZÍDKOVÁ, Renata GAILLYOVÁ and Petr ŠTOURAČ. 20 let diagnostiky maligní hypertermie v České a Slovenské republice. (20 years of malignant hyperthermia in Czechia and Slovakia). ANESTEZIOLOGIE A INTENZIVNI MEDICINA. CZECH REPUBLIC: NAKLADATELSKE STREDISKO C L S J E PURKYNE, 2023, vol. 34, No 3, p. 103-109. ISSN 1214-2158. Available from: https://dx.doi.org/10.36290/aim.2023.045.

NOVOTNÝ, Jan and Radek MAREK. 36th Central European NMR Meeting, NMR Valtice 2023. 2023.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Jiří DAMBORSKÝ, Jan BREZOVSKÝ, Lukáš DANIEL, Alexandra SISÁKOVÁ, Fedor NIKULENKOV and Lumír KREJČÍ. ヌクレアーゼの阻害剤としての置換アミノチアゾール (Substituted aminothiazoles as inhibitors of nucleases). 2022.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Vít VŠIANSKÝ, Fedor NIKULENKOV and Lumír KREJČÍ. ヌクレアーゼの阻害剤としての置換プロパンアミド (Substituted propanamides as inhibitors of nucleases). 2022.

LADUNGOVÁ, Adriana, Daniel BUŠA, Yusuf LODHI, Jan HÝL, Martin ČULEN and Michal ŠMÍDA. . Drug repurposing for venetoclax-resistant acute myeloid leukemia. In PhD retreat 2022, Telč. 2022.

KLINCOVÁ, Martina, Dagmar ŠTĚPÁNKOVÁ, Ivana SCHRÖDEROVÁ, Lenka FAJKUSOVÁ and Petr ŠTOURAČ. A description of the largest Slavonic group of patients investigated for risk of malignant hyperthermia. A retrospective observational national cohort study. In 40th Annual Meeting, Harrogate, Anglie, 25.-27.5.2022. 2022.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. A hunting strategy and virion structure of P. aeruginosa bacteriophage JBD30 revealed by cryo-electron microscopy. In The XVIII Discussions in Structural Molecular Biology and the 5th User Meeting of CIISB. 2022.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. A hunting strategy and virion structure of phage JBD30 revealed by cryo-electron microscopy. In Viruses of Microbes 2022. 2022.

DOSEDĚLOVÁ, Věra, František FORET, Martina DOUBKOVÁ, Kristián BRAT and Petr KUBÁŇ. A novel temperature-controlled open source microcontroller based sampler for collection of exhaled breath condensate in point-of-care diagnostics. Talanta. Elsevier, 2022, vol. 237, January, p. 1-8. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2021.122984.

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HAJJI, Khadija, Jiří SEDMÍK, Anna CHERIAN, Damiano AMORUSO, Liam KEEGAN and Mary Anne O'CONNELL. ADAR2 enzymes: efficient site-specific RNA editors with gene therapy aspirations. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 10, p. 1281-1297. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079266.122.

SCHINDLER, Ondřej, Tomáš RAČEK and Radka SVOBODOVÁ. Alphacharges - a web service for calculating QM-like partial atomic charges for AlphaFold proteins. In XXI. setkání biochemiků a molekulárních biologů. 2022.

NIEDZIELA, Agnieszka, Lucyna DOMZALSKA, Wioletta DYNKOWSKA, Markéta PERNISOVÁ and Krystyna RYBKA. Aluminum Stress Induces Irreversible Proteomic Changes in the Roots of the Sensitive but Not the Tolerant Genotype of Triticale Seedlings. PLANTS-BASEL. BASEL: MDPI, 2022, vol. 11, No 2, p. 1-17. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants11020165.

VLADEJIC, Jovanka, Fen YANG, Eva Dvořák TOMAŠTÍKOVÁ, Jaroslav DOLEŽEL, Jan PALEČEK and Aleš PEČINKA. Analysis of BRCT5 domain-containing proteins reveals a new component of DNA damage repair in Arabidopsis. Frontiers in Plant Science. Lausanne: Frontiers Media S.A., 2022, vol. 13, December, p. 1-14. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.1023358.

AGERBIRK, Niels, David I. PATTISON, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Sabine MONTAUT and Dan STAERK. Ancient Biosyntheses in an Oil Crop: Glucosinolate Profiles in Limnanthes alba and Its Relatives (Limnanthaceae, Brassicales). Journal of Agricultural and Food Chemistry. American Chemical Society, 2022, vol. 70, No 4, p. 1134-1147. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.1c07299.

BOISTEAU, Emeric, Céline POSSEME, Federico Di MODUGNO, Julien EDELINE, Cédric COULOUARN, Roman HRSTKA, Andrea MARTIŠOVÁ, Frédéric DELOM, Xavier TRETON, Leif A. ERIKSSON, Eric CHEVET, Astrid LIÈVRE and Eric OGIER-DENIS. Anterior gradient proteins in gastrointestinal cancers: from cell biology to pathophysiology. Oncogene. Springer Nature, 2022, vol. 41, No 42, p. 4673-4685. ISSN 0950-9232. Available from: https://dx.doi.org/10.1038/s41388-022-02452-1.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Martin KNOZ, Martin HLADÍK, Tomáš KEMPNÝ, Lubomír JANDA, Šárka KOBZOVÁ, Lukáš VACEK, Filip RŮŽIČKA and Lucy VOJTOVÁ. Antimicrobials for future infection control and treatment: What clinicians need and what biotechnicians have. In International workshop on bone and soft tissues engineering, Reykjavik, ISL. 2022.

PŘIKRYLOVÁ, Klára, Eva SÝKOROVÁ and Miloslava FOJTOVÁ. ARM protein modulates the strength of the response to DNA damage in Arabidopsis. In 7th European Workshop on Plant Chromatin 2022. 2022.

RAČEK, Tomáš, Ondřej SCHINDLER, Lenka PTÁČNÍKOVÁ and Radka SVOBODOVÁ. Atomic Charge Calculator II – a web service for calculating partial atomic charges. In ENBIK2022. 2022. ISBN 978-80-7592-127-7.

MOR, Eliana, Markéta PERNISOVÁ, Max MINNE, Guillaume CERUTTI, Dagmar RIPPER, Jonah NOLF, Jennifer ANDRES, Laura RAGNI, Matias D. ZURBRIGGEN, Bert DE RYBEL and Teva VERNOUX. bHLH heterodimer complex variations regulate cell proliferation activity in the meristems of Arabidopsis thaliana. ISCIENCE. UNITED STATES: CELL PRESS, 2022, vol. 25, No 11, p. 105364-105382. ISSN 2589-0042. Available from: https://dx.doi.org/10.1016/j.isci.2022.105364.

BERA, Krishnendu. Binding and inhibitory effect of ravidasvir on 3CLpro of SARS-CoV-2: a molecular docking, molecular dynamics and MM/PBSA approach. Journal of Biomolecular Structure and Dynamics. Taylor & Francis, 2022, vol. 40, No 16, p. 7303-7310. ISSN 0739-1102. Available from: https://dx.doi.org/10.1080/07391102.2021.1896388.

FALGINELLA, Francesco Luca, Marek KRAVEC, Martina DRABINOVÁ, Petra PACLÍKOVÁ, Vítězslav BRYJA and Robert VÁCHA. Binding of DEP domain to phospholipid membranes: More than just electrostatics. Biochimica et Biophysica Acta (BBA) - Biomembranes. Amsterdam: Elsevier, 2022, vol. 1864, No 10, p. 1-12. ISSN 0005-2736. Available from: https://dx.doi.org/10.1016/j.bbamem.2022.183983.

ELIÁŠ, Sara, Jana HURYCHOVÁ, Pavel DOBEŠ, Duarte Nuno TOUBARRO TIAGO, Nelson SIMÕES and Pavel HYRŠL. Bioactive molecules produced by Heterorhabditis bacteriophora affects the phenoloxidase system of Galleria mellonella. In Seventh International Congress of Nematology. 2022.

ELIÁŠ, Sara, Jana ILGOVÁ, Jana HURYCHOVÁ, Paola ALBERT POYÁN, Pavel DOBEŠ, Martin KAŠNÝ and Pavel HYRŠL. Bioactive molecules produced by Heterorhabditis bacteriophora after in vitro stimulation by insect tissue. In 18th meeting IOBC/WPRS Working Group Microbial and Nematode Control of Invertebrate Pests. 2022.

HOFROVÁ, Alena, Karin RAVASZOVÁ and Jozef HRITZ. Biophysical characterization of extracellular carbonic anhydrase IX. In Instruct Biennial Structural Biology Conference. 2022.

JURAČKA, Stanislav, Barbora HRNČÍŘOVÁ, Barbora BURÝŠKOVÁ, Daniel GEORGIEV and Pavel DVOŘÁK. Building the SynBio community in the Czech Republic from the bottom up: You get what you give. Biotechnology Notes. Elsevier B.V., 2022, vol. 3, December, p. 124-134. ISSN 2665-9069. Available from: https://dx.doi.org/10.1016/j.biotno.2022.11.002.

PIKULOVÁ, Petra, Pia Yasmine JURČEK, Jan CHYBA, Michal KNOR, Anna HRUZÍKOVÁ, Jan NOVOTNÝ and Radek MAREK. Calculations of paramagnetic NMR chemical shifts in supramolecular host-guest systems of Ru(III) complexes. In 35th Central European NMR Meeting, VALTICE, 2022. 2022. ISBN 978-80-263-1717-3.

HLUCHÝ, Milan, Pavla GAJDUŠKOVÁ, Igor RUIZ DE LOS MOZOS, Michal RÁJECKÝ, Michael KLUGE, Benedict-Tilman BERGER, Zuzana SLABÁ, David POTĚŠIL, Elena WEISS, Jernej ULE, Zbyněk ZDRÁHAL, Stefan KNAPP, Kamil PARUCH, Caroline C. FRIEDEL and Dalibor BLAŽEK. CDK11 regulates pre-mRNA splicing by phosphorylation ofSF3B1. NATURE. ENGLAND: NATURE PORTFOLIO, 2022, vol. 609, No 7928, p. 829-834. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-022-05204-z.

LYSÁK, Martin. Celebrating Mendel, McClintock, and Darlington: On end-to-end chromosome fusions and nested chromosome fusions. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2022, vol. 34, No 7, p. 2475-2491. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koac116.

SEDMÍK, Jiří, Tereza VÁŇOVÁ, Jan RAŠKA, Kateřina AMRUZ ČERNÁ, Veronika POSPÍŠILOVÁ, Veronika FEDOROVÁ, Petr FOJTÍK, Simona VOCHYÁNOVÁ, Hana KLÍMOVÁ, Klára PLEŠINGROVÁ, Petr TAUŠ, Karla PLEVOVÁ, Markéta NEZVEDOVÁ, Zdeněk SPÁČIL, Michaela CAPANDOVÁ, Petra ORVISKÁ, Z. BENEŠOVÁ, P. ABAFY, L. VALIHRACH and Jana HOUSEROVÁ. Cerebral organoids in disease modeling. In PhD retreat 2022, Telč. 2022.

SKLENÁŘ, Vladimír, Radovan FIALA, Jiří NOVÁČEK, Josef HOUSER, Jan PŘIBYL, Zbyněk ZDRÁHAL, Milan EŠNER, Michal MIKL, Boris TICHÝ, Vojtěch BYSTRÝ and Radka SVOBODOVÁ. CF Day Meeting. 2022.

NOVÁK, Jan, Táňa MACHÁČKOVÁ, Tereza NOVÁKOVÁ, Július GODAVA, Petr HUDE, Víta ŽAMPACHOVÁ, Karolína TRACHTOVÁ, Petr NĚMEC, Helena BEDÁŇOVÁ, Ondřej SLABÝ, Julie DOBROVOLNÁ, Lenka ŠPINAROVÁ and Jan KREJČÍ. Cirkulující mikroRNA jako biomarkery rejekce u pacientů po srdeční transplantaci: od profilování k validaci kandidátních molekul (Circulating microRNA as biomarkers of graft rejection in patients after heart transplantation: from microRNA profiling to candidate molecules validation). In 49. Pracovní setkání Komise experimentální kardiologie. 2022.

REIGL, Tomáš, Veronika NAVRKALOVÁ, Kamila STRÁNSKÁ, Jakub Paweł PORC, Karol PÁL, Šárka POSPÍŠILOVÁ, Nikos DARZENTAS and Karla PLEVOVÁ. CLLue: an interactive bioinformatic tool for data exploration, segregation, and important variables selection. In 11th ESLHO Symposium, Polsko, Katowice. 2022.

REIGL, Tomáš, Jakub Paweł PORC, Veronika NAVRKALOVÁ, Karol PÁL, Kamila STRÁNSKÁ, Nikos DARZENTAS, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. CLLue: an interactive bioinformatic tool for data exploration, segregation, and important variables selection. In CEITEC PhD Conference. 2022.

BROM, Tomáš, Martin STOJASPAL, Tomáš JANOVIČ, Ivona NEČASOVÁ, Pavel VEVERKA and Ctirad HOFR. Codanin1 and CDIN1 interaction: implications for inherited anemia progression. In XXI. setkání biochemiků a molekulárních biologů. 2022. ISBN 978-80-280-0136-0.

DOSTÁLOVÁ, Lenka, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Narendra Varma GOTTUMUKKALA, Yusuf LODHI and Michal ŠMÍDA. Combined drug and CRISPR/CAS9 screening reveals specific targets for SF3B1- and NOTCH1- mutated CLL cells. In EHA 2022 in HemaSphere 2022; 6(S3): 1012-1013. 2022.

KONEČNÁ, Kateřina, Lukáš TICHÝ and Tomáš FREIBERGER. Common rearrangements of the LDLR gene in the Czech population likely arise from one mutational event. In ESHG, Rakousko, Vídeň. 2022.

ALCARAZ, Alper James G., Shaina BARANIUK, Kamil MIKULÁŠEK, Bradley PARK, Taylor LANE, Connor BURBRIDGE, Jessica EWALD, David POTĚŠIL, Jianguo XIA, Zbyněk ZDRÁHAL, David SCHNEIDER, Doug CRUMP, Niladri BASU, Natacha HOGAN, Markus BRINKMANN and Markus HECKER. Comparative analysis of transcriptomic points-of-departure (tPODs) and apical responses in embryo-larval fathead minnows exposed to fluoxetine. ENVIRONMENTAL POLLUTION. ENGLAND: ELSEVIER SCI LTD, 2022, vol. 295, FEB, p. "118667", 12 pp. ISSN 0269-7491. Available from: https://dx.doi.org/10.1016/j.envpol.2021.118667.

BOŘILOVÁ LINHARTOVÁ, Petra, Iva KOTÁSKOVÁ, Petra ŠPLÍCHALOVÁ, Daniela GACHOVÁ, Dávid SZÁRAZ, Sabina CERULOVÁ, Ctirad MACHÁČEK, Petr ANDRLA, Jan LOCHMAN, Danuše FRIDRICHOVÁ, Zbyněk ZDRÁHAL, Petra VÍDEŇSKÁ and Zdeněk DANĚK. Comparative bacteriome analysis of tooth and cystic fluid in patients with apical periodontitis and radicular cyst – pilot study. In FEBS, 2022. 2022. Available from: https://dx.doi.org/10.1002/2211-5463.13440.

ATTULURI, Venkata Pardha S., Juan Francisco SANCHEZ LOPEZ, Lukáš MAIER, Kamil PARUCH and Helene ROBERT BOISIVON. Comparing the efficiency of six clearing methods in developing seeds of Arabidopsis thaliana. Plant Reproduction. Springer, 2022, vol. 35, No 4, p. 279-293. ISSN 2194-7953. Available from: https://dx.doi.org/10.1007/s00497-022-00453-4.

NAVRKALOVÁ, Veronika, Andrea MAREČKOVÁ, Michaela BOHÚNOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Jakub HYNŠT, Kamila RÉBLOVÁ, Šárka POSPÍŠILOVÁ, Andrea JANÍKOVÁ and Jana KOTAŠKOVÁ. Comparison of DNA and RNA-based approaches for the genetic characterization and stratification of patients with diffuse large B-cell lymphoma. In Mendel Genetics Conference 2022. 2022.

PŘIKRYLOVÁ, Klára, Agata Magdalena KILAR, Petra KOVÁČIKOVÁ, Jiří FAJKUS, Eva SÝKOROVÁ and Miloslava FOJTOVÁ. Compromised function of ARM, the interactor of Arabidopsis telomerase, suggests its role in stress responses. Plant Science. Elsevier, 2022, vol. 325, December, p. 1-16. ISSN 0168-9452. Available from: https://dx.doi.org/10.1016/j.plantsci.2022.111453.

DAS, NR., Krishnendu BERA, T. SHARMA, AP. TOROPOVA, AA. TOROPOV and PGR. ACHARY. Computational approach for building QSAR models for inhibition of HIF-1A. JOURNAL OF THE INDIAN CHEMICAL SOCIETY. INDIA: ELSEVIER, 2022, vol. 99, No 10, p. 100687-100695. ISSN 0019-4522. Available from: https://dx.doi.org/10.1016/j.jics.2022.100687.

POKORNÁ, Pavlína, Miroslav KREPL, Sébastien CAMPAGNE and Jiří ŠPONER. Conformational Heterogeneity of RNA Stem-Loop Hairpins Bound to FUS-RNA Recognition Motif with Disordered RGG Tail Revealed by Unbiased Molecular Dynamics Simulations. Journal of Physical Chemistry B. American Chemical Society, 2022, vol. 126, No 45, p. 9207-9221. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.2c06168.

SALVI, Nicola, Vojtěch ZAPLETAL, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Convergent views on disordered protein dynamics from NMR and computational approaches. BIOPHYSICAL JOURNAL. UNITED STATES: CELL PRESS, 2022, vol. 121, No 20, p. 3785-3794. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2022.09.016.

KASILIAUSKAITE, Aiste, Karel KUBÍČEK, Tomáš KLUMPLER, Martina ZÁNOVÁ, David ZAPLETAL, Eliska KOUTNA, Jiří NOVÁČEK and Richard ŠTEFL. Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly. Nucleic acids research. Oxford: Oxford University Press, 2022, vol. 50, No 10, p. 5961-5973. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac451.

CHARESHNEU, Aliaksei, David SEHNAL and Radka SVOBODOVÁ. CoverView: clear atom-level visualization of electron density coverage of PDB structures to assist validation. 2022.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In Annual PhD conference Biomedical sciences, Brno. 2022.

BROM, Tomáš, Tomáš JANOVIČ, Pavel VEVERKA, Martin STOJASPAL and Ctirad HOFR. Critical interactions of neuronal transcription factor REST with stabilizer TRF2. 2022.

ZAPLETAL, David, Karel KUBÍČEK, Martina ZÁNOVÁ, Radek MALIK, Marek ŠEBESTA, Jiří NOVÁČEK, Petr SVOBODA and Richard ŠTEFL. Cryo-EM reveals the structural basis for the regulatory function of HEL1 domain in vertebrate DICERs. In Instruct Biennial Structural Biology ConferenceMuntgebouw, Utrecht, The Netherlands | 19-20 May, 2022. 2022.

NOVOTNÁ, Pavla, Václav BAČOVSKÝ, Bohuslav JANOUŠEK and Roman HOBZA. Cytogenetic studies on the sex chromosomes in Silene latifolia – historical insights and recent advances. In The Silene vortex : a model system for the study of evolution. 2022.

PERNISOVÁ, Markéta, Klára HOYEROVÁ, Jan HEJÁTKO and Ondřej NOVÁK. Cytokinin Forefront Research 2022. 2022.

DEB, Rahul, Ivo KABELKA, Jan PŘIBYL and Robert VÁCHA. De novo design of peptides that form transmembrane barrel pores killing antibiotic resistant bacteria. 2022.

BADIA-I-MOMPEL, P., JV. SANTIAGO, J. BRAUNGER, C. GEISS, D. DIMITROV, S. MÜLLER-DOTT, Petr TAUŠ, A. DUGOURD, Ch. HOLLAND, RR FLORES and J. SAEZ-RODRIGUEZ. decoupleR: Ensemble of computational methods to infer biological activities from omics data. Bioinformatics Advances. Spojené království: Oxford University Press, 2022, vol. 2, No 1, p. 1-3. ISSN 2635-0041. Available from: https://dx.doi.org/10.1093/bioadv/vbac016.

BARTONIČKA, Tomáš, Zdeněk BOCHNÍČEK, Vítězslav BRYJA, Petr BUREŠ, Magdalena BURGR, Martin CULEK, Miloš ČERNÍK, Martin ČERNOHORSKÝ, Dominik ČERNÝ, Martin ČUTA, Jiří DANIHELKA, Jiří DOŠKAŘ, Zuzana DOŠLÁ, Petr FIRBAS, Eduard FUCHS, Milan GELNAR, Jan GLOSER, Michal HÁJEK, Jan HELEŠIC, Ivan HOLOUBEK, Michal HORSÁK, Petr HROUDA, Dagmar CHYTKOVÁ, Magdaléna CHYTRÁ, Milan CHYTRÝ, Zuzana JAYASUNDERA, Jaroslav JONAS, Mikoláš JURDA, Josef KALAS, Tomáš KAŠPAROVSKÝ, Jana KLÁNOVÁ, Jaroslav KOČA, Alois KOZUBÍK, František KUBÍČEK, Radan KUČERA, Aleš LACINA, Kamil LÁSKA, Jaromír LEICHMANN, Zdeněk LOSOS, Přemysl LUBAL, Jaroslav MALINA, Petr MIKULÍK, Dominik MUNZAR, Rudolf MUSIL, Jana MUSILOVÁ, Marek NEČAS, Miroslav NĚMEC, Milan NOVÁK, Kateřina NOVÁKOVÁ, Stanislav PEKÁR, Milan POTÁČEK, Pavel PROŠEK, Antonín PŘICHYSTAL, Jiřina RELICHOVÁ, Jiří ROSICKÝ, Zdeněk ŘEHÁK, Ivo SEDLÁČEK, Jana SCHENKOVÁ, Jiří SCHLAGHAMERSKÝ, Eduard SCHMIDT, Pavlína SLAVÍKOVÁ, Jan SLOVÁK, Josef STANĚK, Kateřina ŠEBKOVÁ, Vladimír ŠIMEK, Roman ŠIMON HILSCHER, Pavel ŠIŠMA, Taťána ŠKARKOVÁ, Petr ŠPAČEK, Magdalena ŠPOKOVÁ, Vladimír ŠTEFL, Jan ŠVANCARA, Andrea ŠPALEK TÓTHOVÁ, Libuše TRNKOVÁ, David TRUNEC, Martin VÁCHA, Jaromír VAŇHARA, Monika VÍTĚZOVÁ, Michaela WIMMEROVÁ, Světlana ZAHRÁDKOVÁ, Petr ZBOŘIL and Josef ZEMAN. Dějiny psané přírodovědci : Vývoj vědních oborů na Přírodovědecké fakultě Masarykovy univerzity (History written by naturalists : Development of scientific disciplines at Masaryk University’s Faculty of Science). Online. Edited by Milan Gelnar - Z. Jayasundera. 1., elektronické vyd. Brno: Masarykova univerzita, 2022, 997 pp. ISBN 978-80-280-0089-9.

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NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. Describing 14-3-3 dimerization: tools to obtain KD. In XXII. Workshop of Biophysical Chemists and Electrochemists. 2022. ISBN 978-80-280-0087-5.

FUJDIAROVÁ, Eva, Josef HOUSER, Filip MELICHER, Lukáš FALTINEK and Michaela WIMMEROVÁ. Detailed analysis of binding sites in the PLL family. 2022.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Detekce rozsáhlých delecí a duplikací v genech spojených s neuromuskulárním onemocněním. (Detection of large deletions and duplications in genes associated with neuromuscular disease). In Celostátní sjezd Společnosti lékařské genetiky a genomiky ČLS JEP a 55. výroční cytogenetická konference, Praha. 2022.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylation changes in proteins and cells. In XXIst Meeting of Biochemists and Molecular Biologists. 2022. ISBN 978-80-280-0136-0.

JEŽKOVÁ, Petra, Jana SKŘIČKOVÁ, Gejza WIMMER, Jana ZELINKOVÁ, Zbyněk ZDRÁHAL and Erika LATTOVÁ. Differentiation of Sialyl Linkages Using a Combination of Alkyl Esterification and Phenylhydrazine Derivatization: Application for N-Glycan Profiling in the Sera of Patients with Lung Cancer. ANALYTICAL CHEMISTRY. UNITED STATES: AMER CHEMICAL SOC, 2022, vol. 94, No 18, p. 6736-6744. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.2c00105.

MELNIKAVA, Alesia. DIRIGENT GENE AtDIR13 INDUCED BY CYTOKININ PARTICIPATES IN PLANT STRESS RESPONSES. In ExBio meeting 05-06.09.2022 Cejkovice, Czech Republic. 2022.

PEŠOVÁ, Michaela, Veronika MANČÍKOVÁ, Robert HELMA, Šárka PAVLOVÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jana KOTAŠKOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 phosphorylation patterns in chronic lymphocytic leukemia patients are reflected in circumjacent pathways activation upon DNA damage. In Mendel genetics Conference 2022. 2022.

PEŠOVÁ, Michaela, Veronika MANČÍKOVÁ, Robert HELMA, Šárka PAVLOVÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jana KOTAŠKOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 phosphorylation patterns in chronic lymphocytic leukemia patients are reflected in circumjacent pathways activation upon DNA damage. In EHA 2022 in HemaSphere 2022; 6(S3): 976. 2022.

PEŠOVÁ, Michaela, Veronika MANČÍKOVÁ, Robert HELMA, Šárka PAVLOVÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jana KOTAŠKOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 phospohrylation patterns in chronic lymphocytic leukemia patients are reflected in circumjacent pathways activation upon DNA damage. In PhD retreat 2022, Telč. 2022.

NAVRKALOVÁ, Veronika, Jana KOTAŠKOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Martina VALIŠOVÁ, Michaela BOHÚNOVÁ, Marcela ŽENATOVÁ, Lenka RADOVÁ, Anna PANOVSKÁ and Šárka POSPÍŠILOVÁ. Dynamics of genomic aberrations in relation to disease activity in untreated patients with chronic lymphocytic leukemia. In EHA 2022 in HemaSphere 2022; 6(S3): 998-999. 2022.

OLEKSIAK, Tadeusz, Ioannis SPYROGLOU, Darmara PACON, Przemysław MATYSIK, Markéta PERNISOVÁ and Krystyna RYBKA. Effect of drought on wheat production in Poland between 1961 and 2019. Crop Science. Madison: Crop Science Society of America, 2022, vol. 62, No 2, p. 728-743. ISSN 0011-183X. Available from: https://dx.doi.org/10.1002/csc2.20690.

SEBUYOYA, Ravery Jovinary, Ludmila MORÁŇOVÁ, Nasim IZADI, Lukáš MORÁŇ, Roman HRSTKA, Milan ANTON and Martin BARTOSIK. Electrochemical DNA biosensor coupled to LAMP reaction for early diagnostics of cervical precancerous lesions. Biosensors and Bioelectronics: X. Amsterdam: Elsevier, 2022, vol. 12, December 2022, p. 1-8. ISSN 2590-1370. Available from: https://dx.doi.org/10.1016/j.biosx.2022.100224.

MORÁŇOVÁ, Ludmila, Michal STANÍK, Roman HRSTKA, Susana CAMPUZANO and Martin BARTOŠÍK. Electrochemical LAMP-based assay for detection of RNA biomarkers in prostate cancer. Talanta. Elsevier, 2022, vol. 238, February, p. 123064-123071. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2021.123064.

KUČERA, Josef, Ondřej PEŠ, Tomáš JANOVIČ, Ctirad HOFR, Lenka KUBINYIOVÁ, Ján TÓTH, Štěpán KÁŇA and Petr TÁBORSKÝ. Enhancement of luminescence signal by deuterated water - Practical implications. Sensors and Actuators B: Chemical. Amsterdam: Elsevier B.V., 2022, vol. 352, No 1, p. 1-8. ISSN 0925-4005. Available from: https://dx.doi.org/10.1016/j.snb.2021.131029.

CHALUPOVÁ, Eliška, Ondřej VACULÍK, Jakub POLÁČEK, Filip JOZEFOV, Tomáš MAJTNER and Panagiotis ALEXIOU. ENNGene: an Easy Neural Network model building tool for Genomics. BMC Genomics. BioMed Central, 2022, vol. 23, No 1, p. 248-258. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-022-08414-x.

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TREBICHALSKÁ, Zuzana, Aygul ISHEMGULOVA, Liya MUKHAMEDOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. Enteroviruses reach cytoplasm by endosome disruption. In EUROPIC 2022. 2022.

BROM, Tomáš, Tomáš JANOVIČ, Martin STOJASPAL, Eliška KŮŘILOVÁ, Simona CHLUDILOVÁ and Ctirad HOFR. Essential transcription regulator Rta of Epstein-Barr virus - functional and structural implications for new antiviral strategy. In 1st MOSBRI Scientific Conference. 2022. Available from: https://dx.doi.org/.

BROM, Tomáš, Tomáš JANOVIČ, Martin STOJASPAL, Eliška KŮŘILOVÁ, Simona CHLUDILOVÁ and Ctirad HOFR. Essential transcription regulator Rta of Epstein-Barr virus - functional and structural implications for new antiviral strategy. In Instruct Biennial Structural Biology Conference. 2022.

HUBINSKÝ, Marcel, José Luís RODRÍGUEZ LORENZO, Daniel GACKOWSKI, Tomáš JANÍČEK and Roman HOBZA. Evidence of novel epigenetic marks within Silene latifolia genome. 2022.

MAU, Martin, Terezie MALÍK MANDÁKOVÁ, Xingliang MA, Jana EBERSBACH, Lifang ZOU, Martin LYSÁK and Timothy F SHARBEL. Evolution of an Apomixis-Specific Allele Class in Supernumerary Chromatin of Apomictic Boechera. Frontiers in Plant Science. Lausanne: FRONTIERS MEDIA SA, 2022, vol. 13, JUN, p. 890038-890054. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.890038.

KILAR, Agata Magdalena, Petr FAJKUS and Jiří FAJKUS. Evolution of plant telomerase RNAs: farther to the past, deeper to the roots. In Mendel Early Career Symposium. 2022.

ŠÁMALOVÁ, Markéta, Evelína GAHUROVÁ and Jan HEJÁTKO. Expansin-mediated developmental and adaptive responses: A matter of cell wall biomechanics? Quantitative Plant Biology. Cambridge University Press, 2022, vol. 3, June, p. 1-14. ISSN 2632-8828. Available from: https://dx.doi.org/10.1017/qpb.2022.6.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Kamila STRÁNSKÁ, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Marcela ŽENATOVÁ, Anna PANOVSKÁ, Michael DOUBEK, Jana KOTAŠKOVÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Exploring clonal evolution in CLL: Analysis by whole exome sequencing. In 2nd Translational Research Conference Chronic Lymphocytic Leukaemia, E-conference. 2022.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Martina VALIŠOVÁ, Kamila RÉBLOVÁ, Terézia KURUCOVÁ, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ, Jana KOTAŠKOVÁ and Karla PLEVOVÁ. Exploring different aspects of clonal evolution in chronic lymphocytic leukemia. In Mendel Genetics Conference 2022. 2022.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Jakub Paweł PORC, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Martina VALIŠOVÁ, Kamila RÉBLOVÁ, Terézia KURUCOVÁ, Karolína ČERNOVSKÁ, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ, Jana KOTAŠKOVÁ and Karla PLEVOVÁ. Exploring different aspects of clonal evolution in chronic lymphocytic leukemia. In EMBO Workshop, Itálie, Rimini. 2022.

ZLÍNSKÁ, Vladimíra, Vaclav MATOUSEK, Lukáš TRANTÍREK and Riccardo RIGO. Fluorine Labeling as a Versatile Tool for Probing Nucleic Acid Folding and Interactions by NMR Spectroscopy. ALDRICHIMICA ACTA. UNITED STATES: ALDRICH CHEMICAL CO INC, 2022, vol. 55, No 2, p. 45-52. ISSN 0002-5100.

FERUS, Martin, Antonín KNÍŽEK, Lukáš PETERA, Adam PASTOREK, Jana HRNČÍŘOVÁ, Luboš JANKOVIČ, Ondřej IVANEK, Jiří ŠPONER, Anna KŘIVKOVÁ, Homa SAEIDFIROZEH, Svatopluk CIVIŠ, Elias CHATZITHEODORIDIS, Klaudia MRÁZIKOVÁ, Lukáš NEJDL, Franz SAIJA, Judit E. ŠPONER and Giuseppe CASSONE. Formamide-Based Post-impact Thermal Prebiotic Synthesis in Simulated Craters: Intermediates, Products and Mechanism. Frontiers in Astronomy and Space Sciences. Frontiers Media SA, 2022, vol. 9, May, p. 1-11. ISSN 2296-987X. Available from: https://dx.doi.org/10.3389/fspas.2022.882145.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. From nano- to milimolar: dimerization dissociation constant determination. In Chemistry towards Biology (CTB10). 2022. ISBN 978-80-971665-3-3.

FROHLICH, Jan, Kristina KOVACOVICOVA, Marco RAFFAELE, Tereza VIRGLOVA, Eliska CIZKOVA, Jan KUČERA, Julie DOBROVOLNÁ, Martin WABITSCH, Marion PEYROU, Francesca BONOMINI, Rita REZZANI, George N. CHALDAKOV, Anton B. TONCHEV, Michelino DI ROSA, Nicolas BLAVET, Václav HEJRET and Manlio VINCIGUERRA. GDF11 inhibits adipogenesis and improves mature adipocytes metabolic function via WNT/beta-catenin and ALK5/SMAD2/3 pathways. Cell Proliferation. 2022, vol. 55, No 10, p. 1-15. ISSN 0960-7722. Available from: https://dx.doi.org/10.1111/cpr.13310.

OLSEN, Luka N, Marie K BRANDRUD, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Charlotte S BJORA, Eduardo CIRES, Inger NORDAL and Anne K BRYSTING. Genetic structure and evolution of diploid Cochlearia in Iceland. Botanical Journal of the Linnean society. OXFORD: The Linnean Society of London, 2022, vol. 200, No 3, p. 395-415. ISSN 0024-4074. Available from: https://dx.doi.org/10.1093/botlinnean/boac018.

ZUO, Sheng, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ, Mark EDGINTON, Ihsan A AL-SHEHBAZ and Martin LYSÁK. Genome diploidization associates with cladogenesis, trait disparity, and plastid gene evolution. PLANT PHYSIOLOGY. UNITED STATES: OXFORD UNIV PRESS INC, 2022, vol. 190, No 1, p. 403-420. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiac268.

SALAVA, Hymavathi, Sravankumar THULA, Adria SANS SÁNCHEZ, Tomasz NODZYNSKI and Fatemeh MAGHULY. Genome Wide Identification and Annotation of NGATHA Transcription Factor Family in Crop Plants. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2022, vol. 23, No 13, p. 7063-7084. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms23137063.

ZUO, Sheng, Terezie MALÍK MANDÁKOVÁ, Michaela KUBOVÁ and Martin LYSÁK. Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales). PLANT JOURNAL. ENGLAND: WILEY, 2022, vol. 110, No 5, p. 1462-1475. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15750.

LODHI, Yusuf, Adriana LADUNGOVÁ, Daniel BUŠA, Helena PESCHELOVÁ, Martin ČULEN and Michal ŠMÍDA. Genome-wide Screening Optimizations and High-throughput Compound Screening to Identify Novel Treatment Options in Venetoclax-resistant AML. In Annual PhD conference Biomedical sciences, Brno. 2022.

GREŠOVÁ, Katarína, Petr ŠIMEČEK, Vlastimil MARTINEK, David ČECHÁK and Panagiotis ALEXIOU. Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification. 2022. ISBN 978-80-7592-127-7.

POSPÍŠIL, Jakub, Milos HRABOVSKY, Dáša BOHAČIAKOVÁ, Zuzana HOVADKOVA, Miroslav JURÁSEK, Jarmila MLČOUŠKOVÁ, Kamil PARUCH, Šárka NEVOLOVÁ, Jiří DAMBORSKÝ, Aleš HAMPL and Josef JAROŠ. Geometric Control of Cell Behavior by Biomolecule Nanodistribution. ACS BIOMATERIALS SCIENCE & ENGINEERING. WASHINGTON: AMER CHEMICAL SOC, 2022, vol. 8, No 11, p. 4789-4806. ISSN 2373-9878. Available from: https://dx.doi.org/10.1021/acsbiomaterials.2c00650.

DOSEDĚLOVÁ, Věra and Petr KUBÁŇ. Gold nanoparticles – from synthesis to extraction of biological thiols and CE-LIF analysis. In APCE-CECE ITP-IUPAC 2022. 2022.

HEJÁTKO, Jan, Jiří FAJKUS, Zbyněk ZDRÁHAL, Natallia MADZIA VALASEVICH, Helene ROBERT BOISIVON and František FORET. Green Biotech Workshop 2022. 2022.

HOLOUBEK, Jiří, Klára BEDNÁŘOVÁ, Jan HAVIERNIK, Ivana HUVAROVÁ, Zuzana DVOŘÁKOVÁ, Jiří ČERNÝ, Martina OUTLÁ, Jiří SALÁT, Eva KONKOLOVA, Evzen BOURA, Daniel RŮŽEK, Michaela VORLÍČKOVÁ, Luděk EYER and Daniel RENČIUK. Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: their role as a new antiviral target and in virus biology. Nucleic Acids Research. Oxford University Press, 2022, vol. 50, No 8, p. 4574-4600. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac225.

JEDLIČKOVÁ, Veronika, Kateřina MÁCOVÁ, Marie ŠTEFKOVÁ, Jan BUTULA, Jana ZEMÁNKOVÁ, Marek SEDLÁČEK and Helene ROBERT BOISIVON. Hairy root transformation system as a tool for CRISPR/Cas9-directed genome editing in oilseed rape (Brassica napus). FRONTIERS IN PLANT SCIENCE. SWITZERLAND: FRONTIERS MEDIA SA, 2022, vol. 13, August, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.919290.

AL-SHEHBAZ, Ihsan A, Terezie MALÍK MANDÁKOVÁ, Klaus MUMMENHOFF and Martin LYSÁK. Heliophila verna (Brassicaceae), a new species from the Northern Cape of South Africa. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 555, No 2, p. 195-199. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.555.2.8.

LEXA, Matej, Monika ČECHOVÁ, Son Hoang NGUYEN, Pavel JEDLIČKA, Viktor TOKAN, Zdeněk KUBÁT, Roman HOBZA and Eduard KEJNOVSKÝ. HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization. BIOINFORMATICS. ENGLAND: OXFORD UNIV PRESS, 2022, vol. 38, No 16, p. 4030-4032. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btac442.

SPYROGLOU, Ioannis, Krystyna RYBKA, Paweł CZEMBOR, Dominika PIASKOWSKA, Markéta PERNISOVÁ and Przemysław MATYSIK. Higher alterations in leaf fluorescence parameters of wheat cultivars predict more extensive necrosis in response to Zymoseptoria tritici. PLANT PATHOLOGY. ENGLAND: WILEY, 2022, vol. 71, No 6, p. 1454-1466. ISSN 0032-0862. Available from: https://dx.doi.org/10.1111/ppa.13569.

LARDON, Robin, Hoang Khai TRINH, Xiangyu XU, Lam Dai VU, Brigitte VAN DE COTTE, Markéta PERNISOVÁ, Steffen VANNESTE, Ive DE SMET and Danny GEELEN. Histidine kinase inhibitors impair shoot regeneration in Arabidopsis thaliana via cytokinin signaling and SAM patterning determinants. Frontiers in Plant Science. Frontiers Media S.A., 2022, vol. 13, September, p. 1-22. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.894208.

GIALLONGO, Sebastiano, Daniela REHAKOVA, Tommaso BIAGINI, Oriana LO RE, Priyanka RAINA, Gabriela LOCHMANOVÁ, Zbyněk ZDRÁHAL, Igor RESNICK, Pille PATA, Illar PATA, Martin MISTRIK, Joao Pedro DE MAGALHAES, Tommaso MAZZA, Irena KOUTNÁ and Manlio VINCIGUERRA. Histone Variant macroH2A1.1 Enhances Nonhomologous End Joining-dependent DNA Double-strand-break Repair and Reprogramming Efficiency of Human iPSCs. Stem Cells. OXFORD: OXFORD UNIV PRESS, 2022, vol. 40, No 1, p. 35-48. ISSN 1066-5099. Available from: https://dx.doi.org/10.1093/stmcls/sxab004.

CAVALLIN, Ivana, Marek BARTOŠOVIČ, Tomáš SKALICKÝ, Praveenkumar RENGARAJ, Martin DEMKO, Martina Christina SCHMIDT-DENGLER, Aleksej DRINO, Mark HELM and Štěpánka VAŇÁČOVÁ. HITS-CLIP analysis of human ALKBH8 reveals interactions with fully processed substrate tRNAs and with specific noncoding RNAs. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 12, p. 1568-1581. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079421.122.

KASHKAN, Ivan, Kseniya TIMOFEYENKO and Kamil RŮŽIČKA. How alternative splicing changes the properties of plant proteins. Quantitative Plant Biology. Cambridge University Press, 2022, vol. 3, July 2022, p. 1-11. ISSN 2632-8828. Available from: https://dx.doi.org/10.1017/qpb.2022.9.

SUKENÍK, Lukáš, Rahul DEB and Robert VÁCHA. HOW LARGE MOLECULES CAN ENTER CELL. In Czech Chemical Society Symposium Series - Annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2022. ISSN 2336-7202.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Hunting Strategy and Virion structure of Bacteriophage JBD30 Revealed by Cryo-electron Microscopy. In CEITEC PhD Conference 2022. 2022.

PIKULOVÁ, Petra, Pia Yasmine JURČEK, Jan CHYBA, Michal KNOR, Anna HRUZÍKOVÁ, Jan NOVOTNÝ and Radek MAREK. Hyperfine chemical shift in host-guest systems of Ru(III) with macrocycles. In EUROMAR 2022. 2022.

BENEŠOVÁ, Iva, Adam Paulin URMINSKÝ, Jana HALÁMKOVÁ and Lenka HERNYCHOVÁ. Changes of serum protein N-glycosylation in cancer. Časopis Klinická onkologie. Praha: Česká lékařská společnost J. E. Purkyně, 2022, vol. 35, No 3, p. 174-180. ISSN 0862-495X. Available from: https://dx.doi.org/10.48095/ccko2022174.

RIEVAJOVÁ, Martina, Lenka MALINOVSKÁ, Hana BEREZŇÁKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Characterization of a novel lectin from pathogenic fungus Microsporum canis. In 29. kongres Československé společnosti mikrobiologické s mezinárodní účastí. 2022. ISBN 978-80-88379-18-8.

POKORNÁ, Pavlína. Characterization of structural ensembles at dynamic RNA-protein interfaces with molecular dynamics simulations – study of FUS RRM-RGG binding to RNA hair- pins. In RNA 2022. 2022.

BOUCHALOVÁ, Pavla, Lucia SOMMEROVÁ, David POTĚŠIL, Andrea MARTIŠOVÁ, Petr LAPČÍK, Veronika BRYCHTOVÁ, Alexander SCHERL, Petr VOŇKA, Joan PLANAS IGLESIAS, Eric CHEVET, Pavel BOUCHAL and Roman HRSTKA. Characterization of the AGR2 Interactome Uncovers New Players of Protein Disulfide Isomerase Network in Cancer Cells. Molecular & Cellular Proteomics. American Society for Biochemistry and Molecular Biology, 2022, vol. 21, No 2, p. 1-19. ISSN 1535-9484. Available from: https://dx.doi.org/10.1016/j.mcpro.2021.100188.

JEMELKOVÁ, Jitka, Edit LELKES, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Karel J. ANGELIS and Jan PALEČEK. Characterization of the NSE6 subunit of the Physcomitrium patens SMC5/6 complex. 2022.

COLVILLE, Carly, Alper James ALCARAZ, Derek GREEN, Bradley PARK, Jianguo XIA, Othman SOUFAN, Pavel HRUŠKA, David POTĚŠIL, Zbyněk ZDRÁHAL, Doug CRUMP, Niladri BASU, Natacha HOGAN and Markus HECKER. Characterizing toxicity pathways of fluoxetine to predict adverse outcomes in adult fathead minnows (Pimephales promelas). SCIENCE OF THE TOTAL ENVIRONMENT. NETHERLANDS: ELSEVIER, 2022, vol. 817, APR, p. "152747", 10 pp. ISSN 0048-9697. Available from: https://dx.doi.org/10.1016/j.scitotenv.2021.152747.

GOTTUMUKKALA, Narendra Varma, Veronika MANČÍKOVÁ, Aneta LEDEREROVÁ, Veronika KOZLOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI, Jan VERNER and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity by preventing CD19 antigen escape in relapsed models. In XVII. Myeloma and Cell Therapy Workshop, Ostrava. 2022.

GOTTUMUKKALA, Narendra Varma, Veronika MANČÍKOVÁ, Aneta LEDEREROVÁ, Veronika KOZLOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI, Jan VERNER and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity by preventing CD19 antigen escape in relapsed models. In Annual PhD conference Biomedical sciences, Brno. 2022.

BROCK, Jordan R., Terezie MALÍK MANDÁKOVÁ, Michael MCKAIN, Martin LYSÁK and Kenneth M. OLSEN. Chloroplast phylogenomics in Camelina (Brassicaceae) reveals multiple origins of polyploid species and the maternal lineage of C. sativa. Horticulture Research. Oxford University Press, 2022, vol. 9, January, p. 1-13. ISSN 2662-6810. Available from: https://dx.doi.org/10.1093/hr/uhab050.

STEFANOVIE, B, T CLARENCE, Lenka JURČIŠINOVÁ, Jakub Paweł PORC, Karla PLEVOVÁ and Jan PALEČEK. Chromatin organization by the SMC5/6 complex. In SYMPOSIUM & ANNUAL MC MEETING Nuclear Architecture & Function in Toulouse. 2022.

ŠMAK, Pavel, Jana GREGOROVÁ, Lenka KUBINYIOVÁ, Jan ŠTINGL and Ondřej PEŠ. Chromatographic modeling as a tool in optimizing reversed-phase separation methods. In 23. Ročník školy hmotnostní spektrometrie. 2022. ISBN 978-80-88195-25-2.

DOGAN, Mert, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO and Martin LYSÁK. Idahoa and Subularia: Hidden polyploid origins of two enigmatic genera of crucifers. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2022, vol. 109, No 8, p. 1273-1289. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16042.

MARTIŠOVÁ, Andrea, Lucia SOMMEROVÁ, Adam KREJCI, Iveta SELINGEROVÁ, Tamara KOLAROVA, Filip ZAVADIL KOKAS, Miloš HOLÁNEK, Ján PODHOREC, Tomáš KAZDA and Roman HRSTKA. Identification of AGR2 Gene-Specific Expression Patterns Associated with Epithelial-Mesenchymal Transition. International Journal of Molecular Sciences. MDPI, 2022, vol. 23, No 18, p. 1-19. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms231810845.

MARTIŠOVÁ, Andrea, Lucia SOMMEROVÁ, Iveta SELINGEROVA, Adam KREJCI, Tamara KOLAROVA, Filip Zavadil KOKAS and Roman HRSTKA. Identification of expression patterns associated with epithelial-mesenchymal transition in lung cancer cellular model. In Brněnské onkologické dny. 2022.

MARTIŠOVÁ, Andrea, Lucia SOMMEROVÁ, Iveta SELINGEROVA, Adam KREJCI, Tamara KOLAROVA, Zavadil Kokas FILIP and Roman HRSTKA. Identification of gene-specific signatures associated with AGR2 expression and TGF-β exposure in lung cancer cellular model. In 5th Edition of International Cancer Conference. 2022.

KOTAŠKOVÁ, Jana, Andrea MAREČKOVÁ, Daniela POKRIVČÁKOVÁ, Eva ONDROUŠKOVÁ, Anna FIDRICHOVÁ, Lenka BRYJOVÁ, Viera HRABČÁKOVÁ, Jakub Paweł PORC, Veronika NAVRKALOVÁ, Karla PLEVOVÁ, Marie JAROŠOVÁ, Šárka POSPÍŠILOVÁ, Martin ŠTORK and Luděk POUR. Identification of genetic aberrations in multiple myeloma patients with low tumour burden using comprehensive NGS testing. In EHA-SWG Scientific Meeting Integrated Cell Tracking in Oncohematology: Diagnosis, Targeted Therapy and Residual Disease, Francie, Bordeaux. 2022.

LADUNGOVÁ, Adriana, Daniel BUŠA, Yusuf LODHI, Jan HÝL, Martin ČULEN and Michal ŠMÍDA. Identification of novel therapeutic options for venetoclax-resistant AML cells through drug repurposing. In EHA 2022 in HemaSphere 2022; 6(S3): 626-627. 2022.

NOVÁK, Jan, Táňa MACHÁČKOVÁ, Lucie ULRICHOVÁ, Karolína TRACHTOVÁ, Miroslav SOUČEK and Bohuslav KIANIČKA. Identification of plasmatic microRNAs associated with pulmonary embolism in patients with acute-onset dyspnea – pilot results. In Czech Cardiovascular Research and Inovation Days. 2022.

RANDALL, Ricardo S, Claire JOURDAIN, Anna NOWICKA, Kateina KADUCHOVA, Michaela KUBOVÁ, Mohammad A AYOUB, Veit SCHUBERT, Christophe TATOUT, Isabelle COLAS, K. KALYANIKRISHNA, Sophie DESSET, Sarah MERMET, Aurelia BOULAFLOUS-STEVENS, Ivona KUBALOVA, Terezie MALÍK MANDÁKOVÁ, Stefan HECKMANN, Martin LYSÁK, Martina PANATTA, Raffaella SANTORO, Daniel SCHUBERT, Ales PECINKA, Devin ROUTH and Celia BAROUX. Image analysis workflows to reveal the spatial organization of cell nuclei and chromosomes. Nucleus. 2022, vol. 13, No 1, p. 277-299. ISSN 1949-1034. Available from: https://dx.doi.org/10.1080/19491034.2022.2144013.

SUBADINI, Suchismita, Ram Sankar PANIGRAHY, Nishesh Kumar GUPTA, Krishnendu BERA and Harekrushna SAHOO. Impact of Chromate and Dichromate on Lysozyme Stability: A Spectroscopic and Molecular Docking Investigation. Luminescence. Wiley, 2022, vol. 37, No 6, p. 876-882. ISSN 1522-7235. Available from: https://dx.doi.org/10.1002/bio.4231.

BERA, Krishnendu and Jozef HRITZ. Impact of Phosphorylation for Tau210-240 Peptide and Interaction of Small Molecules and 14-3-3ζ Protein Studies Using Computational Methods. In CEITEC PhD Conference. 2022.

TREBICHALSKÁ, Zuzana, Liya MUKHAMEDOVA, Aygul ISHEMGULOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In situ cryo-electron tomography of enterovirus cell entry. In 16th Multinational Congress on Microscopy. 2022. ISBN 978-80-11-02253-2.

TREBICHALSKÁ, Zuzana, Liya MUKHAMEDOVA, Aygul ISHEMGULOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In situ cryo-electron tomography of enterovirus cell entry. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology). 2022. ISSN 1805-4382.

HOFERKOVÁ, Eva, Soňa KADÁKOVÁ and Marek MRÁZ. In Vitro and In Vivo Models of CLL-T Cell Interactions: Implications for Drug Testing. CANCERS. SWITZERLAND: MDPI, 2022, vol. 14, No 13, p. 3087-3107. ISSN 2072-6694. Available from: https://dx.doi.org/10.3390/cancers14133087.

DOBEŠOVÁ, Lucie, Theresa GIER, Olga KOPEČNÁ, Eva PAGÁČOVÁ, Tomáš VIČAR, Felix BESTVATER, Jiří TOUFAR, Alena BAČÍKOVÁ, Pavel KOPEL, Radek FEDR, Georg HILDENBRAND, Iva FALKOVÁ, Martin FALK and Michael HAUSMANN. Incorporation of Low Concentrations of Gold Nanoparticles: Complex Effects on Radiation Response and Fate of Cancer Cells. Pharmaceutics. MDPI, 2022, vol. 14, No 1, p. 1-42. ISSN 1999-4923. Available from: https://dx.doi.org/10.3390/pharmaceutics14010166.

BARTHA, Laszlo, Terezie MALÍK MANDÁKOVÁ, Ales KOVARIK, Paul-Adrian BULZU, Nathalie RODDE, Vaclav MAHELKA, Martin LYSÁK, Margaux-Alison FUSTIER, Jan SAFAR, Petr CAPAL, Lujza KERESZTES and Horia L BANCIU. Intact ribosomal DNA arrays of Potentilla origin detected in Erythronium nucleus suggest recent eudicot-to-monocot horizontal transfer. New Phytologist. Blackwell Science, 2022, vol. 235, No 3, p. 1246-1259. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18171.

PLUCAROVÁ, Jitka, Séverine JANSEN, Alice LANÍKOVÁ and Lukáš ŽÍDEK. Interactions of adaptor protein Grb2 with microtubule associated protein 2c. In XVIII Discussions in Structural Molecular Biology. 2022.

TAUŠ, Petr, Terézia KURUCOVÁ, Kristýna ZÁVACKÁ, Karol PÁL, Martina VALIŠOVÁ, Jana KOTAŠKOVÁ, Šárka POSPÍŠILOVÁ, Vítězslav BRYJA, Pavlína JANOVSKÁ and Karla PLEVOVÁ. Interrogating the molecular heterogeneity of chronic lymphocytic leukemia through computational approaches. In CEITEC PhD Conference, Brno. 2022.

PORTEŠOVÁ, Šárka, Ondřej STRAKA and Michal JABŮREK. Invenio - komplexní diagnostický systém pro identifikaci profilu schopností dětí (Invenio - a complex diagnostic system for identifying the profilu of children's abilities). In Talent City 2022 - TALENT A VZDĚLÁVÁNÍ. 2022.

PORTEŠOVÁ, Šárka, Michal JABŮREK, Ondřej STRAKA, David MACEK, Petr PALÍŠEK, Veronika ŠROMOVÁ, Jana UNČOVSKÁ, Kateřina KREPSOVÁ, Michaela HOLÁNKOVÁ and Tereza HRSTKOVÁ. Invenio: Objevujeme schopnosti dětí hravě. 2022.

ANTONIADI, Ioanna, Eduardo MATEO-BONMATÍ, Markéta PERNISOVÁ, Federica BRUNONI, Mariana ANTONIADI, Mauricio Garcia-Atance VILLALONGA, Anita AMENT, Michal KARÁDY, Colin TURNBULL, Karel DOLEŽAL, Aleš PĚNČÍK, Karin LJUNG and Ondřej NOVÁK. IPT9, a cis-zeatin cytokinin biosynthesis gene, promotes root growth. Frontiers in Plant Science. SWITZERLAND: Frontiers Media S.A., 2022, vol. 13, No 10, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.932008.

PLACHÁ, Kateřina, Tereza ŠOPÍKOVÁ, Martin BENEŠÍK, Tibor BOTKA, Marie KOMÁRKOVÁ, Vlastimil CHROMEČKA, Marta ŠIBOROVÁ, Andrea POLANSKÁ, Kateřina VÍTKOVÁ, Jana JURČÍKOVÁ and Marek MOŠA. Isolation and characterization of new bacteriophages against clinical isolates Klebsiella pneumoniae and Acinetobacter baumanii from University hospital Ostrava. In Viruses of Microbes 2022, Guimarães, Portugal, 2022. 2022.

KOBZOVÁ, Šárka, Katarína KACVINSKÁ, Lukáš VACEK, Filip RAŠKA, Adam NOREK, Lucy VOJTOVÁ, Břetislav LIPOVÝ and Lubomír JANDA. Karboxymethylcelulózový hydrogel obohacený o enzym lysostafin vykazující antimikrobiální aktivitu vůči meticilin- resistentní bakterii Staphylococcus aureus. 2022.

ZÍDKOVÁ, Jana, Tereza KRAMÁŘOVÁ, Johana KOPČILOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Kazuistiky pacientů s neuromuskulárním onemocněním a neobvyklým typem dědičnosti. (Case reports of patients with neuromuscular disease and an unusual type of inheritance). In Celostátní sjezd Společnosti lékařské genetiky a genomiky ČLS JEP a 55. výroční cytogenetická konference, Praha. 2022.

LIMBERGER, Tanja, Michaela SCHLEDERER, Karolína TRACHTOVÁ, Ines Garces de los Fayos ALONSO, Jiaye YANG, Sandra HOEGLER, Christina STERNBERG, Vojtěch BYSTRÝ, Jan OPPELT, Boris TICHÝ, Margit SCHMEIDL, Petra KODAJOVA, Anton JAEGER, Heidi A NEUBAUER, Monika OBERHUBER, Belinda S SCHMALZBAUER, Šárka POSPÍŠILOVÁ, Helmut DOLZNIG, Wolfgang WADSAK, Zoran CULIG, Suzanne Dawn TURNER, Gerda EGGER, Sabine LAGGER and Lukas KENNER. KMT2C methyltransferase domain regulated INK4A expression suppresses prostate cancer metastasis. Molecular Cancer. LONDON: BioMed Central, 2022, vol. 21, No 1, p. 89-107. ISSN 1476-4598. Available from: https://dx.doi.org/10.1186/s12943-022-01542-8.

CHRÁST, Lukáš, Anna FIDRICHOVÁ, Lenka BRYJOVÁ, Veronika NAVRKALOVÁ, Daniela POKRIVČÁKOVÁ, Andrea MAREČKOVÁ, Marek BORSKÝ, Eva ONDROUŠKOVÁ, Alexandra OLTOVÁ, Petra ŠMUHAŘOVÁ, Luděk POUR, Martin ŠTORK, Jana KOTAŠKOVÁ and Marie JAROŠOVÁ. Komplexní analýza nádorového genomu pacientů s mnohočetným myelomem. (Comprehensive analysis of the tumor genome in patients with multiple myeloma). In Celostátní sjezd Společnosti lékařské genetiky a genomiky ČLS JEP a 55. výroční cytogenetická konference, Praha. 2022.

BRYJOVÁ, Lenka, Eva ONDROUŠKOVÁ, Kateřina ČÁBELOVÁ, Jiří ŠMEJKAL, Petra ŠMUHAŘOVÁ, Jana KOTAŠKOVÁ, Andrea MAREČKOVÁ, Michaela BOHÚNOVÁ, Ivana JEŽÍŠKOVÁ, Adam FOLTA, Dagmar SMITALOVÁ, Michael DOUBEK, Barbora WEINBERGEROVÁ, Libor ČERVINEK, Anna PANOVSKÁ, Daniela ŽÁČKOVÁ and Marie JAROŠOVÁ. Komplexní cytogenomická a molekulárně biologická analýza nádorového genomu pacientů s myeloidními malignitami se zaměřením na cílenou analýzu genu MECOM. (Comprehensive cytogenomic and molecular biological analysis of the tumor genome of patients with myeloid malignancies with a focus on targeted analysis of the MECOM gene). In Celostátní sjezd Společnosti lékařské genetiky a genomiky ČLS JEP a 55. výroční cytogenetická konference, Praha. 2022.

RAŠKA, Filip, Břetislav LIPOVÝ, Lukáš VACEK, Šárka KOBZOVÁ, Rea JAROŠOVÁ, Peter MAKOVICKÝ, Monika VÍCENOVÁ, Edita JEKLOVÁ and Lubomír JANDA. Koncept animálního modelu infekce kůže a měkkých tkání způsobené epidemiologicky relevantním kmenem Staphylococcus aureus - MRSA (Concept of animal model of skin and soft tissue infection caused by epidemiologically relevant strain of Staphylococcus aureus - MRSA). 2022. ISBN 978-80-01-06983-7.

BOHOŠOVÁ, Júlia, Marek KAŠÍK, Adéla KUBÍČKOVÁ, Karolína TRACHTOVÁ, Michal STANÍK, Alexandr POPRACH and Ondřej SLABÝ. LncRNA PVT1 is increased in renal cell carcinoma and affects viability and migration in vitro. JOURNAL OF CLINICAL LABORATORY ANALYSIS. HOBOKEN: WILEY, 2022, vol. 36, No 6, p. 1-9. ISSN 0887-8013. Available from: https://dx.doi.org/10.1002/jcla.24442.

MRÁZIKOVÁ, Klaudia, Pascal AUFFINGER, Jiří ŠPONER and Holger KRUSE. Lone-pair...π Contacts in Nucleic Acids: Revision of Lennard-Jones Parameters Needed. In Virtual Winter School on Computational Chemistry. 2022.

MÁCOVÁ, Kateřina, Unnikannan PRABHULLACHANDRAN, Marie ŠTEFKOVÁ, Ioannis SPYROGLOU, Aleš PĚNČÍK, Lenka ENDLOVÁ, Ondřej NOVÁK and Helene ROBERT BOISIVON. Long-Term High-Temperature Stress Impacts on Embryo and Seed Development in Brassica napus. Frontiers in Plant Science. Frontiers Research Foundation, 2022, vol. 13, APR, p. 844292-844317. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.844292.

KRÁTKÁ, Marie, Pavel JEDLIČKA, Zdeněk KUBÁT, Viktor TOKAN, Jakub ŠMERDA, Petr BUREŠ and Eduard KEJNOVSKÝ. LTR retrotransposons in holocentric plants from the Cyperaceae and Juncaceae families. In ELIXIR CZ Annual conference 2022: Plant Cytogenomics. 2022.

DAVE, Zankruti, Olga VONDÁLOVÁ BLANÁŘOVÁ, Štěpán ČADA, Pavlína JANOVSKÁ, Nikodém ZEZULA, Martin BĚHAL, Kateřina HANÁKOVÁ, Sri Ranjani GANJI, Pavel KREJČÍ, Kristína GÖMÖRYOVÁ, Helena PESCHELOVÁ, Michal ŠMÍDA, Zbyněk ZDRÁHAL, Šárka PAVLOVÁ, Jana KOTAŠKOVÁ, Šárka POSPÍŠILOVÁ and Vítězslav BRYJA. Lyn Phosphorylates and Controls ROR1 Surface Dynamics During Chemotaxis of CLL Cells. Frontiers in Cell and Developmental Biology. Frontiers Media SA, 2022, vol. 10, February 2022, p. 1-11. ISSN 2296-634X. Available from: https://dx.doi.org/10.3389/fcell.2022.838871.

REIGL, Tomáš, Jakub Paweł PORC, Veronika NAVRKALOVÁ, Jakub HYNŠT, Karol PÁL, Kamila STRÁNSKÁ, T. HRON, Z. HALBHUBER, Nikos DARZENTAS, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. LYNX: A web-based bioinformatic tool for targeted next-generation sequencing data analysis and visualization in lymphoid malignancies. In Mendel Genetics Conference 2022. 2022.

KABELKA, Ivo, Vasil GEORGIEV, Lisa MARX, Peter PAJTINKA, Karl LOHNER, Georg PABST, Rumiana DIMOVA and Robert VÁCHA. Magainin 2 and PGLa in Bacterial Membrane Mimics III: Membrane Fusion and Disruption. Biophysical Journal. New York, USA: Cell Press, 2022, vol. 121, No 5, p. 852-861. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2021.12.035.

SEMERARO, E.F., Peter PAJTINKA, L. MARX, Ivo KABELKA, R. LEBER, K. LOHNER, Robert VÁCHA and G. PABST. Magainin 2 and PGLa in bacterial membrane mimics IV: Membrane curvature and partitioning. BIOPHYSICAL JOURNAL. UNITED STATES: CELL PRESS, 2022, vol. 121, No 23, p. 4689-4701. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2022.10.018.

KLINCOVÁ, Martina, Dagmar ŠTĚPÁNKOVÁ, Ivana SCHRÖDEROVÁ, Eva KLABUSAYOVÁ, Edita OŠŤÁDALOVÁ, Iveta VALÁŠKOVÁ, Lenka FAJKUSOVÁ, Jana ZÍDKOVÁ, Renata GAILLYOVÁ and Petr ŠTOURAČ. Malignant hyperthermia in Czechia and Slovakia. British Journal of Anaesthesia. OXFORD: ELSEVIER, 2022, vol. 129, No 2, p. "e41"-"e43", 3 pp. ISSN 0007-0912. Available from: https://dx.doi.org/10.1016/j.bja.2022.04.029.

AGRAWAL, Rekha, Mohan SHARMA, Nidhi DWIVEDI, Sourobh MAJI, Pallabi THAKUR, Alim JUNAID, Jiří FAJKUS, Ashverya LAXMI and Jitendra K. THAKUR. MEDIATOR SUBUNIT17 integrates jasmonate and auxin signaling pathways to regulate thermomorphogenesis. Plant Physiology. American Society of Plant Physiologists, 2022, vol. 189, No 4, p. 2259-2280. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiac220.

TICHÝ, Boris and Markéta PERNISOVÁ. Mendel Genetics Conference 2022: Tours at CEITEC. 2022.

HOBZOVÁ, Dominika, Kateřina KREJČÍ, Lumír KREJČÍ, Alena MIZEROVÁ, Jiřina RELICHOVÁ and Gabriela PAVLÍKOVÁ. Mendel Lectures 2002–2022. 1., elektronické vyd. Brno: Masarykova univerzita, 2022, 317 pp. ISBN 978-80-280-0058-5. Available from: https://dx.doi.org/10.5817/CZ.MUNI.M280-0058-2022.

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CHOCHOLOVÁ, Eva, Eva DROZDOVÁ, Dana FIALOVÁ, Pavel ROUDNICKÝ, Zbyněk ZDRÁHAL, Barbora ZWINSOVÁ, Kateřina NOVOTNÁ, Filip PARDY, Jakub HYNŠT, Marek PEŠKA, Antonín ZŮBEK, Kateřina MRÁZOVÁ, Vladislav KRZYŽÁNEK, Michael DOUBEK and Šárka POSPÍŠILOVÁ. Metagenomic and proteomic analysis of dental calculus of abbot Gregor Johann Mendel. Folia Mendeliana : supplementum ad Acta Musei Moraviae. Moravian Museum Brno, 2022, vol. 58, No 1, p. 57-61. ISSN 0085-0748.

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CHOCHOLOVÁ, Eva, Eva DROZDOVÁ, Dana FIALOVÁ, Martin ČERNÝ, Barbora ZWINSOVÁ, Petra VÍDEŇSKÁ, Kristýna BRZOBOHATÁ and Kateřina NOVOTNÁ. Metagenomic research of the ancient human dental calculus as a potential source for the study of rare infectious diseases. In The Biomania Student Scientific Meeting 2022. 2022. ISBN 978-80-280-0040-0.

HOUSER, Josef. Methods for Characterization of Biomolecular Interactions: Classical versus modern. 2022.

HOUSER, Josef, Monika KUBÍČKOVÁ, Eva FUJDIAROVÁ, Jana KOSOUROVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Methods for characterization of biomolecules at BIC Core facility, CEITEC MU. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of the Czech Infrastructure for Integrative Structural Biology. 2022. ISSN 1211-5894.

BURIÁNKOVÁ, Iva, Anna MOLÍKOVÁ, Monika VÍTĚZOVÁ, Vladimír ONDERKA, Tomáš VÍTĚZ, Iva URBANOVÁ, Nikola HANIŠÁKOVÁ, Martin ČERNÝ, David NOVÁK, Jan LOCHMAN, Josef ZEMAN, Jakub JAVŮREK, Markéta MACHÁLKOVÁ, Linda DENGLER and Harald HUBER. Microbial Communities in Underground Gas Reservoirs Offer Promising Biotechnological Potential. Fermentation. MDPI, 2022, vol. 8, No 6, p. 1-16. ISSN 2311-5637. Available from: https://dx.doi.org/10.3390/fermentation8060251.

ŠUSTR, Filip, Táňa MACHÁČKOVÁ, Martin PEŠL, Karolína TRACHTOVÁ, Jana SVAČINOVÁ, Zdeněk STÁREK, Lenka ŠPINAROVÁ, Bohuslav KIANIČKA, Ondřej SLABÝ and Jan NOVÁK. microRNAs as the predictors of atrial fibrillation recurrence after catheter ablation: next-generation sequencing study. In EHRA 2022. 2022. ISSN 1532-2092. Available from: https://dx.doi.org/10.1093/europace/euac053.272.

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KLIMENTOVÁ, Eva, Václav HEJRET, Katarína GREŠOVÁ, Ilektra-Chara GIASSA and Panagiotis ALEXIOU. miRBind: a Deep Learning method for miRNA binding classification. 2022. ISBN 978-80-7592-127-7.

KLIMENTOVÁ, Eva, Václav HEJRET, Ján KRČMÁŘ, Katarína GREŠOVÁ, Ilektra-Chara GIASSA and Panagiotis ALEXIOU. miRBind: A Deep Learning Method for miRNA Binding Classification. GENES. MDPI, 2022, vol. 13, No 12, p. 2323-2335. ISSN 2073-4425. Available from: https://dx.doi.org/10.3390/genes13122323.

KADÁKOVÁ, Soňa, Eva HOFERKOVÁ, Laura ONDRIŠOVÁ, Daniel FILIP, Josef VEČEŘA, Lenka KOŠŤÁLOVÁ, Miroslav BOUDNÝ, Michaela MEDKOVÁ, Pedro FARIA ZENI, Veronika PALUŠOVÁ, Jiří MAYER, Václav ŠEDA and Marek MRÁZ. Modelling chronic lymphocytic leukaemia microenvironment. In The Biomania Student Scientific Meeting, Brno. 2022.

HURYCHOVÁ, Jana, Jakub DOSTÁL, Pavel DOBEŠ, Martin KUNC, Sara ELIÁŠ, Silvie DOSTÁLKOVÁ, Mária ŠKRABIŠOVÁ, Marek PETŘIVALSKÝ, Pavel HYRŠL and Jiří DANIHLÍK. Modelling of seasonal immune dynamics of honey bees in response to injury and injection of heat-killed Serratia marcescens. In EurBee 9 – 9th European Congress of Apidology. 2022.

LI, Arthur W. H., Katerina ZABRADY, Lewis J. BAINBRIDGE, Matej ZABRADY, Sehr NASEEM-KHAN, Madison B. BERGER, Peter KOLESÁR, G. Andres CISNEROS and Aidan J DOHERTY. Molecular basis for the initiation of DNA primer synthesis. Nature. Nature Research, 2022, vol. 605, No 7911, p. 767-773. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-022-04695-0.

FAJKUSOVÁ, Lenka, Jana ZÍDKOVÁ, Tereza KRAMÁŘOVÁ and Johana KOPČILOVÁ. Molecular genetic diagnostics of neuromuscular diseases. In Mendel Genetics Conference 2022. 2022.

CHOCHOLOVÁ, Eva, Eva DROZDOVÁ, Dana FIALOVÁ, Kateřina NOVOTNÁ, Pavel ROUDNICKÝ, Zbyněk ZDRÁHAL, Kateřina MRÁZOVÁ, Vladislav KRZYŽÁNEK, Barbora ZWINSOVÁ, Filip PARDY, Marek PEŠKA, Antonín ZŮBEK, Michael DOUBEK and Šárka POSPÍŠILOVÁ. Molekulárně biologická analýza zubního kamene a mumifikované tkáně Gregora Johanna Mendela (Biomolecular analysis of calculus and mummified tissue of Gregor Johann Mendel). In Genetická konference Genetické společnosti Gregora Mendela a XXIX. Genetické dny. 2022. ISBN 978-80-7302-182-5.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. Multiple approaches for protein phosphorylation: a story of 14-3-3. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB. 2022.

MRÁZIKOVÁ, Klaudia, Holger KRUSE, Vojtěch MLÝNSKÝ, Pascal AUFFINGER and Jiří ŠPONER. Multiscale Modeling of Phosphate···π Contacts in RNA U-Turns Exposes Differences between Quantum-Chemical and AMBER Force Field Descriptions. Journal of Chemical Information and Modeling. American Chemical Society, 2022, vol. 62, No 23, p. 6182-6200. ISSN 1549-9596. Available from: https://dx.doi.org/10.1021/acs.jcim.2c01064.

GAFFOUR, Amina, Vojtěch ZAPLETAL, Krishnendu BERA and Jana PAVLÍKOVÁ PŘECECHTĚLOVÁ. Multiscale NMR calculations of spin-spin couplings and the phophprylation induced chemical shifts changes in disordered proteins. In International Society of Quantum Biology and Pharmacology (ISQBP). 2022.

KASHKAN, Ivan, Mónika HRTYAN, Katarzyna RETZER, Jana HUMPOLÍČKOVÁ, Aswathy JAYASREE, Roberta FILEPOVÁ, Zuzana VONDRÁKOVÁ, Sibu SIMON, Debbie ROMBAUT, Thomas B. JACOBS, Mikko J. FRILANDER, Jan HEJÁTKO, Jiří FRIML, Jan PETRÁŠEK and Kamil RŮŽIČKA. Mutually opposing activity of PIN7 splicing isoforms is required for auxin-mediated tropic responses in Arabidopsis thaliana. New Phytologist. Wiley, 2022, vol. 233, No 1, p. 329-343. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.17792.

PLANAS IGLESIAS, Joan, Filip OPÁLENÝ, Pavol ULBRICH, Jan ŠTOURAČ, Zainab Kemi SANUSI, José Gaspar RANGEL PAMPLONA PIZARRO PINTO, A. SCHENKMAYEROVÁ, Jan BYŠKA, Jiří DAMBORSKÝ, Barbora KOZLÍKOVÁ and David BEDNÁŘ. Nástroj LoopGrafter (LoopGrafter software tool). 2022.

NICOLAS, Katrina Leslie, Jan SKALÁK, Ioannis SPYROGLOU, Jan ZOUHAR, Dusan TUREK, Stijn DHONDT and Jan HEJÁTKO. Natural genetic variability in multistep phosphorelay as a tool for elucidating drought adaptation in Arabidopsis thaliana. 2022.

HORÁK, Ondřej, Martina BUREŠOVÁ, Senad KOLÁŘ, Klára ŠPANĚLOVÁ, Barbora JEŘÁBKOVÁ, Renata GAILLYOVÁ, Katarína ČESKÁ, Kamila RÉBLOVÁ, Jana ŠOUKALOVÁ, Jana ZÍDKOVÁ, Lenka FAJKUSOVÁ, Hana OŠLEJŠKOVÁ, Ivan REKTOR and Pavlína DANHOFER. Next-generation sequencing in children with epilepsy: The importance of precise genotype–phenotype correlation. EPILEPSY & BEHAVIOR. SAN DIEGO: ACADEMIC PRESS INC ELSEVIER SCIENCE, 2022, vol. 128, March 2022, p. 1-6. ISSN 1525-5050. Available from: https://dx.doi.org/10.1016/j.yebeh.2022.108564.

CAMACHO-ZARCO, Aldo R., Vincent SCHNAPKA, Serafima GUSEVA, Anton ABYZOV, Wiktor ADAMSKI, Sigrid MILLES, Malene Ringkjøbing JENSEN, Lukáš ŽÍDEK, Nicola SALVI and Martin BLACKLEDGE. NMR Provides Unique Insight into the Functional Dynamics and Interactions of Intrinsically Disordered Proteins. CHEMICAL REVIEWS. UNITED STATES: AMER CHEMICAL SOC, 2022, vol. 122, No 10, p. 9331-9356. ISSN 0009-2665. Available from: https://dx.doi.org/10.1021/acs.chemrev.1c01023.

HEJRET, Václav, Nandan Mysore VARADARAJAN, Eva KLIMENTOVÁ, Ilektra-Chara GIASSA, Štěpánka VAŇÁČOVÁ and Panagiotis ALEXIOU. Noncanonical small RNA chimeras identified by AGO2-CLASH. In 16th Microsymposium on RNA Biology. 2022.

HOUSER, Josef, Jana KOSOUROVÁ, Monika KUBÍČKOVÁ, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Novel buffer screen for biomolecular characterization. In 1st MOSBRI Scientific Conference. 2022.

BENEŠÍK, Martin, Tomáš BARTEJS, Dominik CHMELÍK, Dana ŠTVERÁKOVÁ, Tibor BOTKA, Marta ŠIBOROVÁ, Vítězslav FUGLÍK, Martina PARISOVÁ and Marek MOŠA. Novel endolysin of S. sciuri phage S10 and its antimicrobial effect on S. aureus. In Viruses of Microbes 2022, Guimarães, Portugal, 2022. 2022.

HAVRÁNKOVÁ, Eva, V. GARAJ, S. MASCARETTI, A. ANGELI, Zuzana SOLDÁNOVÁ, M. KEMKA, J. MOTYČKA, Marie BRÁZDOVÁ, Jozef CSÖLLEI, J. JAMPÍLEK and C.T. SUPURAN. Novel 1,3,5-Triazinyl Aminobenzenesulfonamides Incorporating Aminoalcohol, Aminochalcone and Aminostilbene Structural Motifs as Potent Anti-VRE Agents, and Carbonic Anhydrases I, II, VII, IX, and XII Inhibitors. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2022, vol. 23, No 1, p. 1-45. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms23010231.

DOBEŠ, Pavel, Martin KUNC, Jana HURYCHOVÁ, Sara ELIÁŠ and Pavel HYRŠL. Omics-based approach to study honey bee (Apis mellifera) response to parasitic mite Varroa sp. and associated pathogens. In Frontiers in Physiology and Disease. 2022.

JEDLIČKOVÁ, Veronika, Shekoufeh EBRAHIMI NAGHANI and Helene ROBERT BOISIVON. On the trail of auxin: reporters and sensors. The Plant Cell. American Society of Plant Physiologists, 2022, vol. 34, No 9, p. 3200-3213. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koac179.

HRNČÍŘOVÁ, Barbora, Martin BENEŠÍK and Pavel DVOŘÁK. Optimalizace syntetických vazebných proteinových lešení na povrchu buněk bakterie Pseudomonas putida. In 29. kongres Československé společnosti mikrobiologické. 2022. ISBN 978-80-88379-18-8.

MIDLIK, Adam, Ivana HUTAŘOVÁ VAŘEKOVÁ, Jan HUTAŘ, Aliaksei CHARESHNEU, Karel BERKA and Radka SVOBODOVÁ. OverProt: secondary structure consensus for protein families. Bioinformatics. Oxford University Press, 2022, vol. 38, No 14, p. 3648-3650. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btac384.

PINĎÁKOVÁ, Eliška, Jiří DANIHLÍK, Silvie DOSTÁLKOVÁ, Marek PETŘIVALSKÝ, Pavel DOBEŠ, Jana HURYCHOVÁ and Pavel HYRŠL. Oxidative stress associated with varroa parasitism: evaluation of lipid peroxidation in infested bees. In EurBee 9 – 9th European Congress of Apidology. 2022.

TUREK, Tomáš and Šárka HLADILOVÁ. Paleontology and paleoecology of scaphopods in the Moravian part of the Carpathian Foredeep. In 21st Slovak-Czech-Polish Paleontological Conference. 2022. ISBN 978-80-8174-064-0.

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BHAGAT, Kriti, Ilektra-Chara GIASSA and Panagiotis ALEXIOU. PENGUINN-RNA: prediction of RNA G-quadruplexes using interpretable Neural Networks. 2022. ISBN 978-80-7592-127-7.

ITTERHEIMOVÁ, Petra, Johan BOBACKA, Vladimír ŠINDELÁŘ and Přemysl LUBAL. Perchlorate Solid-Contact Ion-Selective Electrode Based on Dodecabenzylbambus[6]uril. Chemosensors. MDPI, 2022, vol. 10, No 3, p. 115-130. ISSN 2227-9040. Available from: https://dx.doi.org/10.3390/chemosensors10030115.

ŠOPÍKOVÁ, Tereza, Dana ŠTVERÁKOVÁ, Kateřina PLACHÁ, Martin BENEŠÍK, Marie KOMÁRKOVÁ, Tibor BOTKA, Monika PEICHLOVÁ, Nicol MYSLOVIČOVÁ, Marta ŠIBOROVÁ, Pavel PLEVKA and Marek MOŠA. Phage collection against human and veterinary pathogens. In Viruses of Microbes 2022, Guimarães, Portugal, 2022. 2022.

KOZELEKOVÁ, Aneta, Alexandra NÁPLAVOVÁ, Tomáš BROM, Zuzana TROŠANOVÁ, Petr LOUŠA and Jozef HRITZ. Phosphomimicking mutations ≠ phosphorylation - a case study of 14-3-3 protein. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of the Czech Infrastructure for Integrative Structural Biology. 2022.