Publication Records

SAKAMOTO, Tomoaki, Shuka IKEMATSU, Hokuto NAKAYAMA, Terezie MALÍK MANDÁKOVÁ, Gholamreza GOHARI, Takuya SAKAMOTO, Gaojie LI, Hongwei HOU, Sachihiro MATSUNAGA, Martin LYSÁK and Seisuke KIMURA. A chromosome-level genome assembly for the amphibious plant <i>Rorippa aquatica</i> reveals its allotetraploid origin and mechanisms of heterophylly upon submergence. Communications Biology. BERLIN: Nature Research, 2024, vol. 7, No 1, p. 1-14. ISSN 2399-3642. Available from: https://dx.doi.org/10.1038/s42003-024-06088-7.

MAKOVICKÝ, Peter, Edita JEKLOVÁ, Břetislav LIPOVÝ, Filip RAŠKA, Martin KNOZ, Rea JAROSOVA, Šárka KOBZOVÁ, Lukáš VACEK, Adam NOREK and Lubomír JANDA. A scoring system for histological evaluation of skin during Staphylococcus aureus infections. Biologia. New York: Springer, 2024, vol. 79, No 3, p. 917-925. ISSN 0006-3088. Available from: https://dx.doi.org/10.1007/s11756-023-01567-4.

HRADISKÁ, Helena, Martin KUREČKA, Jan BERÁNEK, Guglielmo TEDESCHI, Vladimír VIŠŇOVSKÝ, Aleš KŘENEK and Vojtěch SPIWOK. Acceleration of Molecular Simulations by Parametric Time-Lagged tSNE Metadynamics. The Journal of Physical Chemistry B. 2024. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.3c05669.

BARTOŠÍK, Martin, Ludmila MORÁŇOVÁ, Nasim IZADI, Johana STRMISKOVÁ, Ravery Jovinary SEBUYOYA, Jitka HOLČÁKOVÁ and Roman HRSTKA. Advanced technologies towards improved HPV diagnostics. Journal of Medical Virology. Wiley, 2024, vol. 96, No 2, p. 1-16. ISSN 0146-6615. Available from: https://dx.doi.org/10.1002/jmv.29409.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jakub ČILLÍK, Lucie NOVOTNÁ and Adrián ROŠINEC. AlphaFind. 2024. Available from: https://dx.doi.org/10.5281/zenodo.11085862.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Jakub ČILLÍK, Miriama JÁNOŠOVÁ, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In Elixir All-Hands 2024. 2024. Available from: https://dx.doi.org/10.7490/f1000research.1119872.1.

GREŠOVÁ, Katarína, Pavlína ŠPRINGEROVÁ, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In ECCB2024. 2024.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome. bioRxiv, 2024.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Katarína GREŠOVÁ, Jaroslav OĽHA, Vlastislav DOHNAL, Adrián ROŠINEC and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome – data and model. 2024. Available from: https://dx.doi.org/10.48700/datst.d35zf-1ja47.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: discover structure similarity across the proteome in AlphaFold DB. Nucleic acids research. Oxford: Oxford University Press, 2024, Neuveden, May 15, p. 1-5. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae397.

PAJTINKA, Peter and Robert VÁCHA. Amphipathic Helices Can Sense Both Positive and Negative Curvatures of Lipid Membranes. Journal of physical chemistry letters. Washington DC: AMER CHEMICAL SOC1155 16TH ST, NW, WASHINGTON, DC 20036, 2024, vol. 15, No 1, p. 175-179. ISSN 1948-7185. Available from: https://dx.doi.org/10.1021/acs.jpclett.3c02785.

JAUREGUI, Gretsen Velezmoro, Dragana VUKIĆ, Isaac G ONYANGO, Carlos ARIAS, Jan S NOVOTNY, Katerina TEXLOVA, Shanshan WANG, Kristina Locker KOVACOVICOVA, Natalie POLAKOVA, Jana ZELINKOVA, Maria CARNA, Valentina LACOVICH STRAŠIL, Brian P HEAD, Daniel HAVAS, Martin MISTRIK, Robert ZOREC, Alexei VERKHRATSKY, Liam KEEGAN, Mary Anne O'CONNELL, Robert RISSMAN and Gorazd B STOKIN. Amyloid precursor protein induces reactive astrogliosis. Acta Physiologica. Hoboken: Wiley, 2024, vol. 240, No 6, p. 1-17. ISSN 1748-1708. Available from: https://dx.doi.org/10.1111/apha.14142.

SINIGAGLIA, Ketty, Anna CHERIAN, Qiupei DU, Valentina LACOVICH STRAŠIL, Dragana VUKIĆ, Janka MELICHEROVÁ, Pavla MUSILOVÁ, Lisa ZERAD, Stanislav STEJSKAL, Radek MALIK, Jan PROCHAZKA, Nadege BONDURAND, Radislav SEDLACEK, Mary Anne O'CONNELL and Liam KEEGAN. An ADAR1 dsRBD3-PKR kinase domain interaction on dsRNA inhibits PKR activation. Cell Reports. CAMBRIDGE: Cell Press, 2024, vol. 43, No 8, p. 1-25. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2024.114618.

GÁBOROVÁ, Mária, Máté VÁGVÖLGYI, Bizhar Ahmed TAYEB, Renáta MINORICS, István ZUPKÓ, Ondřej JURČEK, Szabolcs BÉNI, Renata KUBÍNOVÁ, György Tibor BALOGH and Attila HUNYADI. Antiproliferative diterpenes from three Plectranthus s.l. species. 2024.

RADASZKIEWICZ, Katarzyna Anna, Pavla KOLÁŘOVÁ, Tomasz Witold RADASZKIEWICZ, Petra PACLÍKOVÁ, Kristína GÖMÖRYOVÁ, Tomáš BÁRTA, Kateřina HANÁKOVÁ, Zbyněk ZDRÁHAL and Jakub HARNOŠ. Armed with PRICKLE(3)s: PCP complexes protection against RNF43. In Wnt Meeting 2024 - Heidelberg. 2024.

LIPOVÝ, Břetislav, Lukáš VACEK, Jakub HOLOUBEK, Dominika MATYSKOVÁ, Martin KNOZ, Vladimír VÁŇA, Eva ČERNÁ, Jana BRTNÍKOVÁ, Šárka KOBZOVÁ, Antonín PAVELKA, Edita JEKLOVÁ, Peter MAKOVICKÝ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Biomateriály a biotechnologie v postantibiotické éře. 2024. ISBN 978-80-01-07334-6.

DOLNIKOVA, Alexandra, Dmitry KAZANTSEV, Magdalena KLANOVA, Eva POKORNA, Dana SOVILJ, Cristina Daniela KELEMEN, Liliana TUSKOVA, Eva HOFERKOVÁ, Marek MRÁZ, Karel HELMAN, Nikola CURIK, Katerina MACHOVA POLAKOVA, Ladislav ANDĚRA, Marek TRNĚNÝ and Pavel KLENER. Blockage of BCL-XL overcomes venetoclax resistance across BCL2-positive lymphoid malignancies irrespective of BIM status. Blood advances. AMSTERDAM: ELSEVIER, 2024, vol. 8, No 13, p. 1-12. ISSN 2473-9529. Available from: https://dx.doi.org/10.1182/bloodadvances.2024012906.

ELOY, Povedano, Ruiz-Valdepeñas Montiel VÍCTOR, Ravery Jovinary SEBUYOYA, M. Torrente-Rodríguez REBECA, Maria GARRANZO-ASENSIO, Ana MONTERO-CALLE, José M. PINGARRÓN, Rodrigo BARDERAS, Martin BARTOSIK and Susana CAMPUZANO. Bringing to Light the Importance of the miRNA Methylome in Colorectal Cancer Prognosis Through Electrochemical Bioplatforms. Analytical Chemistry. American Chemical Society, 2024, vol. 96, No 11, p. 4580-4588. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.3c05474.

HOŠKOVÁ, Kateřina, Šárka FAJTLOVÁ, Pavel PLEVKA, Michal MIKL, Milan EŠNER, Radka SVOBODOVÁ and Boris TICHÝ. CF Day 2023. 2024.

JAROŠOVÁ, Markéta, František LORENC, Jan BEDRNÍČEK, Eva PETRÁSKOVÁ, Marie BJELKOVÁ, Veronika BÁRTOVÁ, Eva JAROŠOVÁ, Zbyněk ZDRÁHAL, Jan KYSELKA, Pavel SMETANA, Jaromír KADLEC, Adéla STUPKOVÁ and Jan BÁRTA. Comparison of Yield Characteristics, Chemical Composition, Lignans Content and Antioxidant Potential of Experimentally Grown Six Linseed (Linum usitatissimum L.) Cultivars. PLANT FOODS FOR HUMAN NUTRITION. NETHERLANDS: SPRINGER, 2024, vol. 79, No 1, p. 159-165. ISSN 0921-9668. Available from: https://dx.doi.org/10.1007/s11130-023-01136-9.

MABRY, Makenzie E, R Shawn ABRAHAMS, Ihsan A AL-SHEHBAZ, William J BAKER, Simon BARAK, Michael S BARKER, Russell L BARRETT, Aleksandra BERIC, Samik BHATTACHARYA, Sarah B CAREY, Gavin C CONANT, John G CONRAN, Maheshi DASSANAYAKE, Patrick P EDGER, Jocelyn C HALL, Yue HAO, Kasper P HENDRIKS, Julian M HIBBERD, Graham J KING, Daniel J KLIEBENSTEIN, Marcus A KOCH, Ilia J LEITCH, Frederic LENS, Martin LYSÁK, Alex C MCALVAY, Michael T W MCKIBBEN, Francesco MERCATI, Richard C MOORE, Klaus MUMMENHOFF, Daniel J MURPHY, Lachezar A NIKOLOV, Michael PISIAS, Eric H ROALSON, M Eric SCHRANZ, Shawn K THOMAS, Qingyi YU, Alan YOCCA, J Chris PIRES and Alex E HARKESS. Complementing model species with model clades. Plant Cell. Oxford University Press, 2024, vol. 2023, Jan, p. 1-22. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koad260.

DEB, Rahul, Marcelo D T TORRES, Miroslav BOUDNÝ, Marketa KOBERSKA, Floriana CAPPIELLO, Miroslav POPPER, Katerina DVORAKOVA BENDOVA, Martina DRABINOVÁ, Adelheid HANACKOVA, Katy JEANNOT, Milos PETRIK, Maria Luisa MANGONI, Gabriela BALIKOVA NOVOTNA, Marek MRÁZ, Cesar DE LA FUENTE-NUNEZ and Robert VÁCHA. Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities. Journal of Medicinal Chemistry. Washington: American Chemical Society, 2024, vol. 67, No 16, p. 14040-14061. ISSN 0022-2623. Available from: https://dx.doi.org/10.1021/acs.jmedchem.4c00912.

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ and Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae453.

YAMOUNE, Amel, Markéta ŽĎÁRSKÁ, Thomas DEPAEPE, Anna RUDOLFOVÁ, Jan SKALÁK, Kenneth Wayne BERENDZEN, Virtudes MIRA-RODADO, Michael FITZ, Blanka PEKÁROVÁ, Katrina Leslie MALÁ, Paul TARR, Eliška ŠPAČKOVÁ, Lucia TOMOVIČOVÁ, Barbora PARIZKOVA, Abigail FRANCZYK, Ingrid KOVÁČOVÁ, Vladislav DOLGIKH, Elena ZEMLYANSKAYA, Markéta PERNISOVÁ, Ondrej NOVAK, Elliot MEYEROWITZ, Klaus HARTER, Dominique VAN DER STRAETEN and Jan HEJÁTKO. Cytokinins regulate spatially specific ethylene production to control root growth in Arabidopsis. 2024. Available from: https://dx.doi.org/10.1016/j.xplc.2024.101013.

SVOBODA, Tomáš, Jakub ČILLÍK, Michal MIKL, Tomáš SLAVÍČEK and Radka SVOBODOVÁ. Data Management and FAIRification in MAFIL. In Czech‐BioImaging Annual Scientific Conference 2024: Imaging Principles of Life. 2024.

SVOBODA, Tomáš and Adrián ROŠINEC. Data workflows at CEITEC MU. In Setkání OS metodiků MU. 2024.

MARTINEK, Vlastimil, Jessica MARTIN, Cedric BELAIR, Matthew J PAYEA, Sulochan MALLA, Panagiotis ALEXIOU and Manolis MARAGKAKIS. Deep learning and direct sequencing of labeled RNA captures transcriptome dynamics. NAR Genomics and Bioinformatics. Oxford University Press (OUP), 2024, Vol. 6, Issue 3. Available from: https://dx.doi.org/10.1093/nargab/lqae116.

RYBNIKÁŘ, Michal, Milan MALANÍK, Karel ŠMEJKAL, Emil ŠVAJDLENKA, Polina SHPET, Pavel BABICA, Stefano DALL´ACQUA, Ondřej SMIŠTÍK, Ondřej JURČEK and Jakub TREML. Dibenzocyclooctadiene Lignans from Schisandra chinensis with Anti-Inflammatory Effects. International Journal of Molecular Sciences. BASEL: MDPI, 2024, vol. 25, No 6, p. 1-16. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms25063465.

ŠEDO, Ondrej, Alena ROBLÍČKOVÁ, František JEŽEK, Petr GINTAR, Josef KAMENÍK and Zbyněk ZDRÁHAL. Discriminatory power of MALDI-TOF MS protein profiling analysis of pork meat and meat products. FOOD CHEMISTRY. ENGLAND: ELSEVIER SCI LTD, 2024, vol. 449, AUG, p. 1-11. ISSN 0308-8146. Available from: https://dx.doi.org/10.1016/j.foodchem.2024.139155.

GÁBOROVÁ, Mária, Mate VAGVOLGYI, Bizhar Ahmed TAYEB, Renata MINORICS, Istvan ZUPKO, Ondřej JURČEK, Szabolcs BENI, Renata KUBÍNOVÁ, Gyorgy Tibor BALOGH and Attila HUNYADI. Diterpenes Isolated from Three Different Plectranthus Sensu Lato Species and Their Antiproliferative Activities against Gynecological and Glioblastoma Cancer Cells. ACS Omega. WASHINGTON: American Chemical Society, 2024, vol. 9, No 16, p. 18495-18504. ISSN 2470-1343. Available from: https://dx.doi.org/10.1021/acsomega.4c00800.

MUCINA, Ladislav, Klaus MUMMENHOFF, Pieter WINTER, van Niekerk ADRIAAN, Terezie MALÍK MANDÁKOVÁ and Martin LYSÁK. Drought and life-history strategies in Heliophila (Brassicaceae). New Phytologist. HOBOKEN: Blackwell Science, 2024, vol. 241, No 2, p. 532-534. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19352.

STRMISKOVÁ, Johana, Nasim IZADI, Milan ANTON, Ludmila MORÁŇOVÁ and Martin BARTOŠÍK. ELECTROCHEMICAL BIOASSAY FOR DETECTION OF HUMAN PAPILLOMAVIRUS ONCOGENIC ACTIVITY. In The Eleventh International Workshop on Biosensors. 2024.

STRMISKOVÁ, Johana, Nasim IZADI, Milan ANTON, Ludmila MORÁŇOVÁ and Martin BARTOŠÍK. ELECTROCHEMICAL BIOASSAY FOR DETECTION OF HUMAN PAPILLOMAVIRUS ONCOGENIC ACTIVITY. In The Eleventh International Workshop on Biosensors. 2024.

FRÖHLICH, Jan, Niccolo LIORNI, Manuel MANGONI, Gabriela LOCHMANOVÁ, Pavlína PÍREK, Nikola KAŠTÁNKOVÁ, Pille PATA, Jan KUČERA, George N CHALDAKOV, Anton B TONCHEV, Illar PATA, Vera GORBUNOVA, Eric LEIRE, Zbyněk ZDRÁHAL, Tommaso MAZZA and Manlio VINCIGUERRA. Epigenetic and transcriptional control of adipocyte function by centenarian-associated SIRT6 N308K/A313S mutant. CLINICAL EPIGENETICS. LONDON: BMC, 2024, vol. 16, No 1, p. 1-17. ISSN 1868-7075. Available from: https://dx.doi.org/10.1186/s13148-024-01710-1.

RUDOLF, Jiří, Lucia TOMOVIČOVÁ, Klára PANZAROVÁ, Jiří FAJKUS, Jan HEJÁTKO and Jan SKALÁK. Epigenetics and plant hormone dynamics: a functional and methodological perspective. Journal of Experimental Botany. ENGLAND: OXFORD UNIV PRESS, 2024. ISSN 0022-0957.

SLANINÁKOVÁ, Terézia, Katarína GREŠOVÁ, David PROCHÁZKA, Viktória SPIŠAKOVÁ, Adrián ROŠINEC, Jakub ČILLÍK, Pavlína ŠPRINGEROVÁ, Aleš KŘENEK, Vlastislav DOHNAL, Radka SVOBODOVÁ and Matej ANTOL. Fast, structure-based searching in a large-scale protein data repository. In ELIXIR CZ Annual Conference. 2024. Available from: https://dx.doi.org/10.13140/RG.2.2.31355.53281.

NIRO, Francesco, Soraia FERNANDES, Marco CASSANI, Monica APOSTOLICO, Jorge Oliver-De La CRUZ, Daniel PEREIRA DE SOUSA, Stefania PAGLIARI, Vladimir VINARSKY, Zbyněk ZDRÁHAL, David POTĚŠIL, Václav PUSTKA, Giulio POMPILIO, Elena SOMMARIVA, Davide ROVINA, Angela Serena MAIONE, Luca BERSANINI, Malin BECKER, Marco RASPONI and Giancarlo FORTE. Fibrotic extracellular matrix impacts cardiomyocyte phenotype and function in an iPSC-derived isogenic model of cardiac fibrosis. Translational Research. NEW YORK: ELSEVIER SCIENCE INC, 2024, vol. 273, November 2024, p. 58-77. ISSN 1931-5244. Available from: https://dx.doi.org/10.1016/j.trsl.2024.07.003.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Genetic background of Czech myopathy patients. In European Human Genetics Conference (ESHG), Glasgow, United Kingdom. 2024. ISSN 1018-4813.

LAPČÍK, Petr, R. Greg STACEY, David POTĚŠIL, Petr KULHÁNEK, Leonard J. FOSTER and Pavel BOUCHAL. Global interactome mapping reveals pro-tumorigenic interactions of NF-κB in breast cancer. Molecular and Cellular Proteomics. Elsevier, 2024, vol. 23, No 4, p. 1-20. ISSN 1535-9484. Available from: https://dx.doi.org/10.1016/j.mcpro.2024.100744.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. GraSR: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.br8aq-db495.

SVOBODA, Tomáš, Adrián ROŠINEC and Ondřej FILIP. Hands-on experience with big data transfer via iRODS and Onedata. In e-INFRA CZ CONFERENCE 2024. 2024.

VETEŠNÍKOVÁ ŠIMKOVÁ, Andrea, Kristína KŘÍŽOVÁ, Kristýna VOŘÍŠKOVÁ, Lukáš VETEŠNÍK, Václav HEJRET, Lenka GETTOVÁ, Jiří VOREL, Nikol RESLOVÁ and Vojtěch BYSTRÝ. Heterosis versus breakdown in cyprinid hybrids associated with SVCV infection revealed by transcriptome profile analysis of head kidney. Aquaculture. AMSTERDAM: ELSEVIER, 2024, vol. 578, January, p. "740083", 14 pp. ISSN 0044-8486. Available from: https://dx.doi.org/10.1016/j.aquaculture.2023.740083.

CRHA, Radek, Aneta KOZELEKOVÁ, Alena HOFROVÁ, Lucia IĽKOVIČOVÁ, Norbert GAŠPARIK, Pavel KADEŘÁVEK and Jozef HRITZ. Hiding in plain sight: Complex interaction patterns between Tau and 14-3-3zeta protein variants. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. NETHERLANDS: ELSEVIER, 2024, vol. 266, Pt 2, p. 1-14. ISSN 0141-8130. Available from: https://dx.doi.org/10.1016/j.ijbiomac.2024.130802.

ULLAH, Sajid, Klára PANZAROVÁ, Martin TRTÍLEK, Matej LEXA, Vojtěch MÁČALA, Thomas ALTMANN, Kerstin NEUMANN, Jan HEJÁTKO, Markéta PERNISOVÁ and Evgeny GLADILIN. High-throughput spike detection in greenhouse cultivated grain crops with attention mechanisms based deep learning models. Plant Phenomics. AAAS, 2024, vol. 2024, March, p. 1-11. ISSN 2643-6515. Available from: https://dx.doi.org/10.34133/plantphenomics.0155.

PERNISOVÁ, Markéta. Hormonal Regulation of Plant Regeneration. In Principal Investigator Seminars. 2024.

ŠÁMALOVÁ, Markéta, Alesia MELNIKAVA, Kareem ELSAYAD, Alexis PEAUCELLE, Evelína GAHUROVÁ, Jaromír GUMULEC, Ioannis SPYROGLOU, Elena V ZEMLYANSKAYA, Elena V UBOGOEVA, Darina BALKOVÁ, Martin DEMKO, Nicolas BLAVET, Panagiotis ALEXIOU, Vladimir BENES, Gregory MOUILLE and Jan HEJÁTKO. Hormone-regulated expansins: Expression, localization, and cell wall biomechanics in Arabidopsis root growth. Plant Physiology. CARY: OXFORD UNIV PRESS INC, 2024, vol. 194, No 1, p. 209-228. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiad228.

KOZELEKOVÁ, Aneta, Lucia IĽKOVIČOVÁ, Radek CRHA, Alena HOFROVÁ and Jozef HRITZ. How does phosphorylation affect interaction between 14-3-3ζ and Tau proteins? In XX Discussions in Structural Molecular Biology and 7th User Meeting of CIISB. 2024. ISSN 1211-5894.

BRÁZDOVÁ, Marie. Human ARMC6 binds in vitro to both cancer genes and telomeric RNA, favoring G-quadruplex structure recognition. Biochimica et Biophysica Acta (BBA)-Gene Regulatory Mechanisms. 2024.

ŠPAČKOVÁ, Anna, Ondřej VÁVRA, Tomáš RAČEK, Václav BAZGIER, David SEHNAL, Jiří DAMBORSKÝ, Radka SVOBODOVÁ, David BEDNÁŘ and Karel BERKA. ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era. Nucleic Acids Research. Oxford University Press, 2024, vol. 52, D1, p. "D413"-"D418", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1012.

ŠTEFANOVIE, Barbora, Leon Paul JENNER, Lucie BOZDĚCHOVÁ, Petr FAJKUS, Eva SÝKOROVÁ, Jiří FAJKUS and Jan PALEČEK. Characterisation of the Arabidopsis thaliana telomerase TERT-TR complex. Plant Molecular Biology. Dordrecht (Netherlands): Springer, 2024, vol. 114, No 3, p. 1-12. ISSN 0167-4412. Available from: https://dx.doi.org/10.1007/s11103-024-01461-w.

PUSHKAROVA, Nadiia, Jana HENNELOVA, Sérgio Manuel MARQUES, David BEDNÁŘ, Kamil PARUCH, Naresh AKAVARAM, L. SPICHAL, Jiří DAMBORSKÝ, A. YEMETS and Jan HEJÁTKO. IDENTIFICATION OF NOVEL CYTOKININS BY MOLECULAR DOCKING. In IV Conference for Young Scientists “Plant biology and biotechnology”. 2024.

ŠUSTR, Filip, Táňa MACHÁČKOVÁ, Martin PEŠL, Jana SVAČINOVÁ, Karolína TRACHTOVÁ, Zdeněk STÁREK, Bohuslav KIANIČKA, Ondřej SLABÝ and Jan NOVÁK. Identification of Plasmatic microRNA-206 as New Predictor of Early Recurrence of Atrial Fibrillation after Catheter Ablation Using Next-generation Sequencing. MOLECULAR DIAGNOSIS & THERAPY. AUCKLAND: ADIS INT LTD, 2024, vol. 28, No 3, p. 1-10. ISSN 1177-1062. Available from: https://dx.doi.org/10.1007/s40291-024-00698-x.

HELIA, Ondřej, Barbora MATÚŠOVÁ, Anna HÝSKOVÁ and Miloslava FOJTOVÁ. Impacts of CRISPR/Cas-mediated Chromosome Rearrangements on Arabidopsis thaliana Genome. In European Workshop on Plant Chromatin 2024. 2024.

HAMALA, Vojtech, Kateřina ONDRÁŠKOVÁ, Lucie Cervenkova STASTNA, Ales KRCIL, Monika MULLEROVA, Martin KURFIRT, Katerina HIRSOVA, Jitka HOLCAKOVA, Robert GYEPES, Ivana CISAROVA, Jana BERNASKOVA, Roman HRSTKA and Jindrich KARBAN. Improving the anticancer activity of fluorinated glucosamine and galactosamine analogs by attachment of a ferrocene or ruthenium tetrazene motif. Applied Organometallic Chemistry. Velká Británie: John Wiley & Sons LTD, 2024, vol. 38, No 5, 15 pp. ISSN 0268-2605. Available from: https://dx.doi.org/10.1002/aoc.7399.

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KRÁTKÁ, Marie, Yennifer MATA-SUCRE, Pavel JEDLIČKA, Eduard KEJNOVSKÝ and André MARQUES. Insights into the Evolution of Centromere from Holocentric Luzula sylvatica (Juncaceae). In Student Conference of Plant Biology 2024 Vienna. 2024.

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KONEČNÁ, Kateřina, Petra ZAPLETALOVA, Tomáš FREIBERGER and Lukáš TICHÝ. LDLR gene rearrangements in Czech FH patients likely arise from one mutational event. LIPIDS IN HEALTH AND DISEASE. LONDON: BMC, 2024, vol. 23, No 1, p. 1-11. ISSN 1476-511X. Available from: https://dx.doi.org/10.1186/s12944-024-02013-3.

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AKITA, Masaki, Paul GIRVAN, Mário ŠPÍREK, Jiří NOVÁČEK, David RUEDA, Zbyněk PROKOP and Lumír KREJČÍ. Mechanism of BCDX2-mediated RAD51 nucleation on short ssDNA stretches and fork DNA. Nucleic acids research. Oxford: Oxford University Press, 2024, 15 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae770.

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KHODAM HAZRATI, Mehrnoosh and Robert VÁCHA. Membrane Adsorption Enhances Translocation of Antimicrobial Peptide Buforin 2. Journal of Physical Chemistry B. WASHINGTON: American Chemical Society, 2024, vol. 128, No 35, p. 8469-8476. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.4c04338.

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HUBINSKÝ, Marcel, Roman HOBZA, Marta STARCZAK, Daniel GACKOWSKI, Zdeněk KUBÁT, Tomáš JANÍČEK, Lucie HORÁKOVÁ and José Luís RODRÍGUEZ LORENZO. Non canonical bases differentially represented in the sex chromosomes of the dioecious plant Silene latifolia. Journal of Experimental Botany. Oxford University Press, 2024, vol. 75, No 13, p. 3849-3861. ISSN 0022-0957. Available from: https://dx.doi.org/10.1093/jxb/erae178.

BALAKHONOVA, Veronika, Nadiia PUSHKAROVA, Jan SKALÁK, Tereza DOBISOVA, Zuzana BENEDIKTY, Martin TRTILEK and Jan HEJÁTKO. Non-invasive Assay for Chlorophyll Biosynthesis Kinetics Determination during Early Stages of Arabidopsis De-etiolation. Jove-Journal of Visualized Experiments. Cambridge: JOURNAL OF VISUALIZED EXPERIMENTS, 2024, vol. 2024, No 203, 13 pp. ISSN 1940-087X. Available from: https://dx.doi.org/10.3791/66087.

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ZEMANÍK, Július and Petr KULHÁNEK. QM/MM Reaction Simulations of Alpha-(1,3)-fucosyltransferase of Helicobacter pylori. In XX Discussions in Structural Molecular Biology and 7th User Meeting of CIISB. 2024. ISSN 1211-5894.

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ROŠINEC, Adrián and Tomáš SVOBODA. Research Data Management at CEITEC MU. In Open Science Workshop 2024. 2024.

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HUBINSKÝ, Marcel, Javier Martín-Gómez JOSÉ, Emilio CERVANTES, Roman HOBZA and José Luís RODRÍGUEZ LORENZO. Seed shape and size of Silene latifolia, differences between sexes, and influence of the parental genome in hybrids with Silene dioica. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2024, vol. 15, March 2024, p. 1-13. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2024.1297676.

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LIPOVÝ, Břetislav, Lukáš VACEK, Šárka KOBZOVÁ, Jakub HOLOUBEK, Filip RAŠKA, Martin KNOZ, Martin HLADÍK, Lucy VOJTOVÁ and Lubomír JANDA. Biobetter enzymes for burn-related wound infection: today’s research for tomorrow’s application. In CZECH – JAPANESE SURGICAL SYMPOSIUM WITH INTERNATIONAL PARTICIPATION. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. Biophysical Screening Workshop & Dianthus hands-on. 2023.

HOUSER, Josef and Tomáš KLUMPLER. Bio-SAXS Practical Course 2023. 2023.

ROŠINEC, Adrián and Klára MORAVCOVÁ. Building OpenStack Cloud with Kubernetes as Undercloud. In EGI Conference 2023. 2023.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Vladimír VÁŇA, Lukáš VACEK, Šárka KOBZOVÁ, Antonín PAVELKA, Eva ČERNÁ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Burn wound infections in the present and future preventive and therapeutic concepts. In 17 th International Conference on Materials and Technologies for Defense and Security. 2023.

KADLČÍK, Marek, Michal ŠTEFÁNIK, Ondřej SOTOLÁŘ and Vlastimil MARTINEK. Calc-X and Calcformers: Empowering Arithmetical Chain-of-Thought through Interaction with Symbolic Systems. Online. In Houda Bouamor, Juan Pino, Kalika Bali. Proceedings of the 2023 Conference on Empirical Methods in Natural Language Processing: Main track. Singapore: Association for Computational Linguistics, 2023, p. 12101-12108. ISBN 979-8-89176-060-8. Available from: https://dx.doi.org/10.18653/v1/2023.emnlp-main.742.

HOUSER, Josef, Michaela WIMMEROVÁ and Kristýna HROMÁDKOVÁ. CalScreener Workshop: Calorimetric instrument to measure the metabolic response in biological systems. 2023.

VALENTOVÁ, Lucie, Tibor FÜZIK, Pavel PLEVKA and Jakub POSPÍŠIL. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XXVIII Biennial Conference on Phage/Virus Assembly. 2023.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB. 2023.

KOZELKA, Jiří, Yevgen YURENKO, Jan NOVOTNÝ and Radek MAREK. Catalytic Mechanism of Formate Dehydrogenase: Computational Studies. In 14th EBSA Congress. 2023. ISSN 0175-7571.

TIMOFEYENKO, Kseniya, Dzmitry KANAVALAU, Panagiotis ALEXIOU, Maria KALYNA and Kamil RŮŽIČKA. CATSNAP: a user-friendly algorithm for determining the conservation of protein variants reveals extensive parallelisms in the evolution of alternative splicing. New Phytologist. Wiley, 2023, vol. 238, No 4, p. 1722-1732. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.18799.

HOUSER, Josef and Kateřina HOŠKOVÁ. CEITEC: project-based financing of core facilities. In 2023 Core Technologies for Life Sciences. 2023.

VÁŇOVÁ, Tereza, Jiří SEDMÍK, Jan RAŠKA, Kateřina AMRUZ ČERNÁ, Petr TAUŠ, Veronika POSPÍŠILOVÁ, Markéta NEZVEDOVÁ, Veronika FEDOROVÁ, Soňa KADÁKOVÁ, Hana KLÍMOVÁ, Michaela CAPANDOVÁ, Petra ORVISKÁ, Petr FOJTÍK, Simona BÁRTOVÁ, Karla PLEVOVÁ, Zdeněk SPÁČIL, Hana HŘÍBKOVÁ and Dáša BOHAČIAKOVÁ. Cerebral organoids derived from patients with Alzheimer´s disease with PSEN1/2 mutations have defective tissue patterning and altered development. CELL REPORTS. CAMBRIDGE: CELL PRESS, 2023, vol. 42, No 11, p. 1-27. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.113310.

REIGL, Tomáš, Veronika NAVRKALOVÁ, Jakub Paweł PORC, Karol PÁL, Kamila STRÁNSKÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. CLLue: Searching for connections among clinical, biological, and molecular features in the dataset of leukemia patients. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Jakub Paweł PORC, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Boris TICHÝ, Nicolas BLAVET, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Clonal competition and disrupted molecular processes in chronic lymphocytic leukemia. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-048-2.

SVOBODA, Tomáš, Aleš KŘENEK, Łukasz OPIOŁA, Andrea MANZI and Josef HANDL. Cloudification of scientific experimental data using Onedata. In EGI Conference 2023. 2023.

HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Jan VERNER, Miroslav BOUDNÝ, Gabriela MLADONICKÁ PAVLASOVÁ, Tomáš LOJA, Daniel FILIP, Josef VEČEŘA, Květoslava MATULOVÁ, Hana SKUHROVÁ FRANCOVÁ, Sonali SHARMA, Laura ONDRIŠOVÁ, Veronika PALUŠOVÁ, Lucy VOJTOVÁ, Leoš KŘEN, Michael DOUBEK and Marek MRÁZ. Coculture model with CD40L, IL4 and IL21 for study chronic lymphocytic leukemia proliferation. In CEITEC PhD Conference 2023, Brno. 2023.

JURÁČEK, Jaroslav, Marie MĄDRZYK, Karolína TRACHTOVÁ, Michaela RUČKOVÁ, Júlia BOHOŠOVÁ, Dominik A. BARTH, Martin PICHLER, Michal STANÍK and Ondřej SLABÝ. Combination of Urinary MiR-501 and MiR-335 With Current Clinical Diagnostic Parameters as Potential Predictive Factors of Prostate Biopsy Outcome. CANCER GENOMICS & PROTEOMICS. ATHENS: INT INST ANTICANCER RESEARCH, 2023, vol. 20, No 3, p. 308-316. ISSN 1109-6535. Available from: https://dx.doi.org/10.21873/cgp.20383.

KUSOVÁ, Alžbeta, Lenka STEINBACHOVÁ, Tereza PŘEROVSKÁ, Lenka ZÁVESKÁ DRÁBKOVÁ, Jan PALEČEK, Ahamed KHAN, Gabriela RIGÓOVÁ, Zuzana GADIOU, Claire JOURDAIN, Tino STRICKER, Daniel SCHUBERT, David HONYS and Petra PROCHÁZKOVÁ SCHRUMPFOVÁ. Completing the TRB family: newly characterized members show ancient evolutionary origins and distinct localization, yet similar interactions. Plant Molecular Biology. Springer, 2023, vol. 112, 1-2, p. 61-83. ISSN 0167-4412. Available from: https://dx.doi.org/10.1007/s11103-023-01348-2.

BRYJOVÁ, Lenka, Eva ONDROUŠKOVÁ, Kateřina ČÁBELOVÁ, Jiří ŠMEJKAL, Petra ŠMUHAŘOVÁ, Jana KOTAŠKOVÁ, Andrea MAREČKOVÁ, Michaela BOHÚNOVÁ, Ivana JEŽÍŠKOVÁ, A. FOLTA, Dagmar SMITALOVÁ, Michael DOUBEK, Barbora WEINBERGEROVÁ, Libor ČERVINEK, Anna PANOVSKÁ, Daniela ŽÁČKOVÁ and Marie JAROŠOVÁ. Complex cytogenomic and molecular biological analysis of the tumor genome of patients with myeloid mylignancies with a focus on targeted analysis of the MECOM gene. In EHA-SWG Scientific Meeting on MDS/MPN/AML: Commonalities and Differences of Myeloid Neoplasms, Budapest, Maďarsko. 2023.

LASORSA, Alessia, Krishnendu BERA, Idir MALKI, Elian DUPRE, Francois-Xavier CANTRELLE, Hamida MERZOUGUI, Davy SINNAEVE, Xavier HANOULLE, Jozef HRITZ and Isabelle LANDRIEU. Conformation and Affinity Modulations by Multiple Phosphorylation Occurring in the BIN1 SH3 Domain Binding Site of the Tau Protein Proline-Rich Region. Biochemistry. Washington: American Chemical Society, 2023, vol. 62, No 11, p. 1631-1642. ISSN 0006-2960. Available from: https://dx.doi.org/10.1021/acs.biochem.2c00717.

BÍŇOVSKÝ, Ján, Marta ŠIBOROVÁ, Jiří NOVÁČEK, Karel ŠKUBNÍK, Tibor BOTKA, Martin BENEŠÍK, Roman PANTŮČEK, MARK VAN RAAIJ and Pavel PLEVKA. Conformational changes in baseplate required for genome delivery of S. aureus phage phi812. In 2nd Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora, Czech Chemical Society Symposium Series vol. 21, no. 5, s. 177-256. 2023. ISSN 2336-7210.

BERA, Krishnendu, Isabelle LANDRIEU and Jozef HRITZ. Conformational changes upon phosphorylation of proline rich region of tau(210-240) peptide using molecular dynamic simulation. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology), Nove Hrady, South Bohemia, 23-25 March 2023. 2023.

BUČEKOVÁ, Gabriela, Viktoriia DOSHCHENKO, Vladimír HORSKÝ and Radka SVOBODOVÁ. Conformational study of small carbon rings in ligands. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

PESCHELOVÁ, Helena, Veronika MANČÍKOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 technology as a useful tool in the study of chornic lymphocytic leukemia. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.

PESCHELOVÁ, Helena, Veronika KOZLOVÁ, Veronika MANČÍKOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 technology as a useful tool in the study of chronic lymphocytic leukemia. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

HOUSER, Josef. Crystallography Loops: Handling and Maintenance. 2023.

WLODZIMIERZ, Piotr, Fernando A RABANAL, Robin BURNS, Matthew NAISH, Elias PRIMETIS, Alison SCOTT, Terezie MALÍK MANDÁKOVÁ, Nicola GORRINGE, Andrew J TOCK, Daniel HOLLAND, Katrin FRITSCHI, Anette HABRING, Christa LANZ, Christie PATEL, Theresa SCHLEGEL, Maximilian COLLENBERG, Miriam MIELKE, Magnus NORDBORG, Fabrice ROUX, Gautam SHIRSEKAR, Carlos ALONSO-BLANCO, Martin LYSÁK, Polina Y NOVIKOVA, Alexandros BOUSIOS, Detlef WEIGEL and Ian R HENDERSON. Cycles of satellite and transposon evolution in <i>Arabidopsis</i> centromeres. Nature. BERLIN: NATURE PORTFOLIO, 2023, vol. 618, No 7965, p. 1-34. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-023-06062-z.

ONDROUŠKOVÁ, Eva, Terezie FITZOVÁ, Lenka BRYJOVÁ, Petra ŠMUHAŘOVÁ, Anna PANOVSKÁ, Michael DOUBEK and Marie JAROŠOVÁ. Cytogenetický screening pacientů s chronickou lymfocytární leukémií léčených inhibitorem Brutonovy tyrozinkinázy. In 56. Výroční cytogenomická konference, Ostrava. 2023.

ŠMERINGAI, Ján, Petra PROCHÁZKOVÁ SCHRUMPFOVÁ and Markéta PERNISOVÁ. Cytokinins – Regulators of de novo Shoot Organogenesis. Frontiers in Plant Science. Lausanne: Frontiers Media SA, 2023, vol. 14, August 2023, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1239133.

DEB, Rahul, Ivo KABELKA, Jan PŘIBYL and Robert VÁCHA. De novo design of peptides that form transmembrane barrel pores killing antibiotic resistant bacteria. In BPS Annual Meeting 2023. 2023.

PROCHÁZKOVÁ, Dagmar, Romana BORSKÁ, Jan CHRASTINA, Lenka FAJKUSOVÁ, Petra KONEČNÁ, Kateřina SLABÁ, Jan ŠENKYŘÍK, Karolína PEŠKOVÁ, Petr JABANDŽIEV and Tomáš HONZÍK. Deficit aminoacylázy 1: kazuistika. In 36.pracovní dny-dědičné metabolické poruchy, Znojmo, 3.5.-5.5.2023. 2023. ISBN 978-80-7471-449-8.

., Indu, Jozef HRITZ, Václav BRÁZDA, Rajesh KUMAR and Krishnendu BERA. Designing of Insecticides Against Bemisia tabaci targeting ecdysone receptor. In BERA, Krishnendu. 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

BLASCO, Sofia, Lukáš SUKENÍK and Robert VÁCHA. Designing spheroidal nanoparticles to induce membrane fusion of liposomes. In EMBO Workshop Mechanisms of membrane fusion 2023. 2023.

KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Nicola SALVI, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE and Fabien FERRAGE. Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry. In IDP Community F2F/hybrid meeting. 2023.

ZAPLETAL, Vojtěch, Nicola SALVI, Andrea FLAMM, Zuzana JASEŇÁKOVÁ, Dennis KURZBACH, Mateos BORJA, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Jozef HRITZ, Robert KONRAT, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry. 2023.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Detection of multiexon deletions and duplications in genes associated with neuromuscular disorders. In XXII. Setkání biochemiků a molekulárních biologů, Brno. 2023.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Vladimír VÁŇA, Lukáš VACEK, Šárka KOBZOVÁ, Antonín PAVELKA, Eva ČERNÁ, Lubomír JANDA, Filip RŮŽIČKA and Lucy VOJTOVÁ. Development and testing (old)new antimicrobial substances for topical administration in the 21st century. In 9th Central European Burns congress and 23rd Annual Conference of the Society of Burns Medicine. 2023. ISBN 978-80-89496-24-2.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylations of proteins and cells. In XXIInd Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

ZAPLETAL, David, Karel KUBÍČEK, Petr SVOBODA and Richard ŠTEFL. Dicer structure and function: conserved and evolving features. EMBO reports. Wiley, 2023, vol. 24, No 7, p. 1-13. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.202357215.

MANČÍKOVÁ, Veronika, Michaela PEŠOVÁ, Šárka PAVLOVÁ, Robert HELMA, Kristýna ZÁVACKÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 phosphorylation patterns in chronic lymphocytic leukemia patients are reflected in the activation of circumjacent pathways upon DNA damage. MOLECULAR ONCOLOGY. ENGLAND: WILEY, 2023, vol. 17, No 1, p. 82-97. ISSN 1574-7891. Available from: https://dx.doi.org/10.1002/1878-0261.13337.

PEŠOVÁ, Michaela, Veronika MANČÍKOVÁ, Robert HELMA, Šárka PAVLOVÁ, Václav HEJRET, Petr TAUŠ, Jakub HYNŠT, Karla PLEVOVÁ, Jana KOTAŠKOVÁ, Jitka MALČÍKOVÁ and Šárka POSPÍŠILOVÁ. Distinct p53 Phosphorylation Patterns in Chronic Lymphocytic Leukemia: Where They Come from and How They Affect p53 Function. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

ŠKOLÁKOVÁ, Petra, Martin GAJARSKÝ, Jan PALACKÝ, Denis ŠUBERT, Daniel RENČIUK, Lukáš TRANTÍREK, Jean-Louis MERGNY and Michaela VORLICKOVA. DNA i-motif formation at neutral pH is driven by kinetic partitioning. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2950-2962. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad119.

DOBROVODSKÝ, Daniel and Carmelo DI PRIMO. Do conformational changes contribute to the surface plasmon resonance signal? Biosensors and Bioelectronics. Elsevier, 2023, vol. 232, July, p. 1-9. ISSN 0956-5663. Available from: https://dx.doi.org/10.1016/j.bios.2023.115296.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation. In Inaugural Biochemistry Symposium Puzzles of (Bio)molecular Structure and Dynamics: NMR spectroscopy and complementary approaches. 2023.

NOVOTNÁ, Pavla, Václav BAČOVSKÝ, Muyle ALINE and Roman HOBZA. Dosage compensation mechanism in plants with young sex chromosomes. In The Czech Plant Nucleus Workshop 2023. 2023.

ONDRÁŠKOVÁ, Kateřina, Matouš CWIK, Ondřej HORKÝ, Jitka BERKOVCOVÁ, Jitka HOLČÁKOVÁ, Martin BARTOŠÍK, Tomáš KAZDA, Igor KISS and Roman HRSTKA. Droplet digital PCR analysis of circulating tumor DNA in molecular diagnostics of colorectal cancer patients. 6th Advances in Circulating Tumor Cells: Liquid Biopsy and Precision Oncology: Where do we stand now? In ACTC 2023. Skiathos, Greece, 20.09.2023 - 23.09.2023. Zorg. University of Ahtens; Hellenic Society of Liquid Biopsy. 2023.

SEBUYOYA, Ravery Jovinary, Alejandro VALVERDE, Ludmila MORÁŇOVÁ, Johana STRMISKOVÁ, Roman HRSTKA, Victor RUIZ-VALDEPENAS MONTIEL, José M. PINGARRÓN, Rodrigo BARDERAS, Susana CAMPUZANO and Martin BARTOŠÍK. Dual detection system for cancer-associated point mutations assisted by a multiplexed LNA-based amperometric bioplatform coupled with rolling circle amplification. Sensors and Actuators B: Chemical. Lausanne: Elsevier, 2023, vol. 394, November 2023, p. 1-8. ISSN 0925-4005. Available from: https://dx.doi.org/10.1016/j.snb.2023.134375.

PAULENOVÁ, Eva, Josef HOUSER, Filip MELICHER and Michaela WIMMEROVÁ. Dual specificity of PLL2 lectin. 2023. ISSN 1211-5894.

NAVRKALOVÁ, Veronika, Jana KOTAŠKOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Jakub Paweł PORC, Lenka RADOVÁ, Anna PANOVSKÁ and Šárka POSPÍŠILOVÁ. Dynamics of genomic aberrations in relation to disease activity in untreated patients with chronic lymphocytic leukemia. In 23. Pražské hematologické dny, Praha. 2023.

HEJTMÁNEK, Lukáš, Adrián ROŠINEC and Sebastian LUNA-VALERO. Easy Deployment of Dask and Jupyter Notebooks on Managed Kubernetes. In EGI Conference 2023. 2023.

HYRŠL, Pavel, Pavel DOBEŠ, Martin KUNC, Jana HURYCHOVÁ, Sara ŠREIBR and Jacek MARCINIAK. Effect of longevity and parasitism on immune and physiological parameters of the honey bee. In Zoologické dny 2023. 2023. ISBN 978-80-87189-39-9.

HELIA, Ondřej, Barbora MATÚŠOVÁ, Martin LYČKA, Anna HÝSKOVÁ and Miloslava FOJTOVÁ. Effects of extensive chromosomal rearrangements in terms of genetics and epigenetics in Arabidopsis thaliana model plant. In Plant Chromosome Biology Cytogenetics meeting 2023. 2023.

TRNKA, Tomáš, Robert RÜGER, Ivo DURNÍK and Matti HELLSTRÖM. Efficient pipe interface between the Amsterdam Modeling Suite and external software. 2023.

SCHUMACHER, Neele, Ilka THOMSEN, Florian BRUNDERT, Václav HEJRET, Stefan DUESTERHOFT, Boris TICHÝ, Dirk SCHMIDT-ARRAS, Matthias VOSS and Stefan ROSE-JOHN. EGFR stimulation enables IL-6 trans-signalling via iRhom2-dependent ADAM17 activation in mammary epithelial cells. Biochimica et biophysica acta : Molecular Cell Research. Amsterdam: Elsevier, 2023, vol. 1870, No 7, p. 1-16. ISSN 0167-4889. Available from: https://dx.doi.org/10.1016/j.bbamcr.2023.119489.

ONDRÁŠKOVÁ, Kateřina, Ravery Jovinary SEBUYOYA, Ludmila MORÁŇOVÁ, Jitka HOLČÁKOVÁ, Petr VOŇKA, Roman HRSTKA and Martin BARTOŠÍK. Electrochemical biosensors for analysis of DNA point mutations in cancer research. Analytical and Bioanalytical Chemistry. Springer Heidelberg, 2023, vol. 415, No 6, p. 1065-1085. ISSN 1618-2642. Available from: https://dx.doi.org/10.1007/s00216-022-04388-7.

VEVERKA, Pavel, Tomáš BROM, Tomáš JANOVIČ, Martin STOJASPAL, Matyáš PINKAS, Jiří NOVÁČEK and Ctirad HOFR. Electron microscopy reveals toroidal shape of master neuronal cell differentiator REST – RE1-silencing transcription factor. Computational and Structural Biotechnology Journal. Elsevier, 2023, vol. 21, Dec, p. 731-741. ISSN 2001-0370. Available from: https://dx.doi.org/10.1016/j.csbj.2022.12.026.

MORÁŇOVÁ, Ludmila, Martin BARTOŠÍK, Johana STRMISKOVÁ and Kateřina NOVÁKOVÁ. Elektrochemická analýza klinických vzorků – cesta k translačnímu výzkumu (Electrochemical analysis of clinical samles - a way to translation research). CHEMICKE LISTY. CZECH REPUBLIC: CHEMICKE LISTY, 2023, vol. 2023, No 10, p. 595-603. ISSN 0009-2770. Available from: https://dx.doi.org/10.54779/chl20230595.

SUKENÍK, Lukáš, Liya MUKHAMEDOVA, Michaela PROCHÁZKOVÁ, Karel ŠKUBNÍK, Pavel PLEVKA and Robert VÁCHA. Elucidating the Mechanisms of Genome Release in Picornaviruses using Cryo-EM and Coarse-Grained Simulations. In EBSA Congress 2023. 2023.

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG and Xiaodan MA. EMDB-the Electron Microscopy Data Bank. Nucleic acids research. Oxford: Oxford University Press, 2023, vol. 52, Jan, p. 456-465. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1019.

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ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Aleš KŘENEK and Radka SVOBODOVÁ. Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management. In IBERGRID 2023. 2023.

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CHOCHOLOVÁ, Eva, Pavel ROUDNICKÝ, David POTĚŠIL, Dana FIALOVÁ, Karolína KRYŠTOFOVÁ, Eva DROZDOVÁ and Zbyněk ZDRÁHAL. Extraction Protocol for Parallel Analysis of Proteins and DNA from Ancient Teeth and Dental Calculus. Journal of Proteome Research. American Chemical Society, 2023, vol. 22, No 10, p. 3311-3319. ISSN 1535-3893. Available from: https://dx.doi.org/10.1021/acs.jproteome.3c00370.

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HLAVÁČ, Kryštof, Laura ONDRIŠOVÁ, Václav ŠEDA, Eva HOFERKOVÁ, G. CHIODIN, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Pedro FARIA ZENI, Jan OPPELT, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, M. ŠIMKOVIČ, F. VRBACKÝ, Daniel LYSÁK, SM. FERNANDES, MS. DAVIDS, A. MAIQUES-DIAZ, S. CHARALAMPOPOULOU, I. MARTIN-SUBERO, JR. BROWN, Michael DOUBEK, Francesco FORCONI, Jiří MAYER and Marek MRÁZ. Foxo1-Rictor axis mediates adaptive increase in Akt activity and cell survival during BCR inhibitor therapy in chronic lymphocytic leukemia. In Czech Annual Cancer Research Meeting, Olomouc. 2023.

ONDRIŠOVÁ, Laura, Václav ŠEDA, Eva HOFERKOVÁ, G. CHIODIN, Kryštof HLAVÁČ, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Pedro FARIA ZENI, Jan OPPELT, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, M. SIMKOVIC, F. VRBACKÝ, Daniel LYSÁK, SM. FERNANDES, MS. DAVIDS, A. MAIQUES-DIAZ, S. CHARALAMPOPOULOU, JI. MARTIN-SUBERO, JR. BROWN, Michael DOUBEK, F. FORCONI, Jiří MAYER and Marek MRÁZ. FOX01-rictor AXIS induces AKT phosporylation during CLL cell adaptation to BCR inhibitors: Implications for combinatorial therapy. In ICML, Švýcarsko, Lugano. 2023.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry. In ASHG Annual Meeting 2023. 2023.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry and western blot. In XXII. setkání biochemiků a molekulárních biologů. 2023.

HELIA, Ondřej, Barbora MATÚŠOVÁ, Anna HÝSKOVÁ, Martin LYČKA and Miloslava FOJTOVÁ. Genetic and epigenetic consequences of chromosome editing in Arabidopsis thaliana model plant. In The Czech Plant Nucleus Workshop 2023. 2023.

ZÍDKOVÁ, Jana, Tereza KRAMÁŘOVÁ, Johana KOPČILOVÁ, Kamila RÉBLOVÁ, Jana HABERLOVÁ, Radim MAZANEC, Stanislav VOHÁŇKA, Andrea GŘEGOŘOVÁ, Martina LANGOVÁ, Tomáš HONZÍK, Jana ŠOUKALOVÁ, Hana OŠLEJŠKOVÁ, Pavla SOLAŘOVÁ, Emilie VYHNÁLKOVÁ and Lenka FAJKUSOVÁ. Genetic findings in Czech patients with limb girdle muscular dystrophy. Clinical Genetics. Hoboken: Wiley, 2023, vol. 104, No 5, p. 542-553. ISSN 0009-9163. Available from: https://dx.doi.org/10.1111/cge.14407.

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DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation in rituximab-resistant cells. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

MAREČKOVÁ, Andrea, Veronika NAVRKALOVÁ, Michaela BOHÚNOVÁ, Viera HRABČÁKOVÁ, Samuel HRICKO, Tomáš REIGL, Jakub Paweł PORC, Andrea JANÍKOVÁ and Jana KOTAŠKOVÁ. Genomic aberrations detected in circulating tumor DNA from cerebrospinal fluid and plasma of patients with primary and secondary CNS lymphomas with negative flowcytometry. In ICML 2023, Lugano, červen 2023 in Hematological Oncology. 2023.

GREŠOVÁ, Katarína, Vlastimil MARTINEK, David ČECHÁK, Petr ŠIMEČEK and Panagiotis ALEXIOU. Genomic benchmarks: a collection of datasets for genomic sequence classification. BMC Genomic Data. 2730-6844: BMC, 2023, vol. 24, No 1, p. 1-9. ISSN 2730-6844. Available from: https://dx.doi.org/10.1186/s12863-023-01123-8.

KILAR, Agata Magdalena, Petr FAJKUS and Jiří FAJKUS. GERONIMO: A tool for systematic retrieval of structural RNAs in a broad evolutionary context. GigaScience. Oxford University Press, 2023, vol. 12, October 2023, p. 1-9. ISSN 2047-217X. Available from: https://dx.doi.org/10.1093/gigascience/giad080.

HENDRIKS, Kasper P, Christiane KIEFER, Ihsan A AL-SHEHBAZ, C Donovan BAILEY, van Huysduynen Alex HOOFT, Lachezar A NIKOLOV, Lars NAUHEIMER, Alexandre R ZUNTINI, Dmitry A GERMAN, Andreas FRANZKE, Marcus A KOCH, Martin LYSÁK, Oscar TORO-NUNEZ, Baris OZUDOGRU, Vanessa R INVERNON, Nora WALDEN, Olivier MAURIN, Nikolai M HAY, Philip SHUSHKOV, Terezie MALÍK MANDÁKOVÁ, M Eric SCHRANZ, Mats THULIN, Michael D WINDHAM, Ivana RESETNIK, Stanislav SPANIEL, Elfy LY, J Chris PIRES, Alex HARKESS, Barbara NEUFFER, Robert VOGT, Christian BRAUCHLER, Heimo RAINER, Steven B JANSSENS, Michaela SCHMULL, Alan FORREST, Alessia GUGGISBERG, Sue ZMARZTY, Brendan J LEPSCHI, Neville SCARLETT, Fred W STAUFFER, Ines SCHONBERGER, Peter HEENAN, William J BAKER, Felix FOREST, Klaus MUMMENHOFF and Frederic LENS. Global Brassicaceae phylogeny based on filtering of 1,000-gene dataset. Current Biology. CAMBRIDGE: CELL PRESS, 2023, vol. 33, No 19, p. 4052-4075. ISSN 0960-9822. Available from: https://dx.doi.org/10.1016/j.cub.2023.08.026.

PETERKOVÁ, Kateřina, Mark STITCH, Rayhaan Z. BOOTA, Paul A. SCATTERGOOD, Paul I. P. ELLIOTT, Michael TOWRIE, Peter PODBEVŠEK, Janez PLAVEC and Susan J. QUINN. G-Quadruplex Binding of an NIR Emitting Osmium Polypyridyl Probe Revealed by Solution NMR and Time-Resolved Infrared Studies. Chemistry - A European Journal. Wiley, 2023, vol. 29, No 11, p. 1-7. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.202203250.

VOLAKHAVA, Anastasiya, Šárka PAVLOVÁ, Kristýna ZÁVACKÁ, Karol PÁL, Marcela KRZYŽÁNKOVÁ, Hana SYNÁČKOVÁ, Šárka POSPÍŠILOVÁ, Ilgar MAMEDOV and Karla PLEVOVÁ. Hide and seek retroelement activity in hematological malignancies. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

TEANO, Gianluca, Lorenzo CONCIA, Lea WOLFF, Leopold CARRON, Ivona BIOCANIN, Kateřina ADAMUSOVÁ, Miloslava FOJTOVÁ, Michael BOURGE, Amira KRAMDI, Vincent COLOT, Ueli GROSSNIKLAUS, Chris BOWLER, Celia BAROUX, Alessandra CARBONE, Aline V PROBST, Petra PROCHÁZKOVÁ SCHRUMPFOVÁ, Jiří FAJKUS, Simon AMIARD, Stefan GROB, Clara BOURBOUSSE and Fredy BARNECHE. Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis. Cell Reports. Elsevier, 2023, vol. 42, No 8, p. 1-23. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.112894.

HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL and Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2818-2837. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad092.

ŠPAČKOVÁ, Anna, Ondřej VÁVRA, Tomáš RAČEK, Václav BAZGIER, David SEHNAL, Jiří DAMBORSKÝ, Radka SVOBODOVÁ and Karel BERKA. ChannelsDB 2.0: A Comprehensive Database of Protein Tunnels and Pores in AlphaFold Era. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

KOMÁRKOVÁ, Marie, Martin BENEŠÍK, Kateřina ROSÍKOVÁ, Tibor BOTKA, Lucie VALENTOVÁ, Pavel PLEVKA, Milada DVOŘÁČKOVÁ, Filip RŮŽIČKA and Roman PANTŮČEK. Characterisation of bacteriophages with therapeutic potential against healthcare-associated and multidrug-resistant Pseudomonas aeruginosa. In Studentská vědecká konference MUNI PHARM 2023. Masarykova univerzita, Brno. 2023.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis. In 19th European Magnetic Resonance Congress, EUROMAR 2023. 2023.

CZUBINSKI, Jaroslaw, Erika LATTOVÁ, Zbyněk ZDRÁHAL and Richard STRASSER. Characteristics of N-Glycosylation and Its Impact on the Molecular Behavior of Lupinus angustifolius ?-Conglutin. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY. UNITED STATES: AMER CHEMICAL SOC, 2023, vol. 71, No 19, p. 7359-7369. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.3c00727.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžbeta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis. Proteins: Structure, Function and Bioinformatics. Wiley, 2023, vol. 91, No 9, p. 1276-1287. ISSN 0887-3585. Available from: https://dx.doi.org/10.1002/prot.26531.

LELKES, Edit, Jitka JEMELKOVÁ, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Radka VÁGNEROVÁ, Eva DVOŘÁK TOMAŠTÍKOVÁ, Aleš PEČINKA, Karel J. ANGELIS and Jan PALEČEK. Characterization of the conserved features of the NSE6 subunit of the Physcomitrium patens PpSMC5/6 complex. PLANT JOURNAL. ENGLAND: WILEY, 2023, vol. 115, No 4, p. 1084-1099. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16282.

JEMELKOVÁ, Jitka, Edit LELKES, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Radka VÁGNEROVÁ, Eva TOMAŠTÍKOVÁ, Aleš PEČINKA, Karel J. ANGELIS and Jan PALEČEK. Characterization of the Physcomitrium patens SMC5/6 complex. In The Czech Plant Nucleus Workshop 2023. 2023.

KUSOVÁ, Alžbeta, Marcela HOLÁ, Ivana GOFFOVÁ, Dagmar ZACHOVÁ, Jiří FAJKUS and Petra PROCHÁZKOVÁ SCHRUMPFOVÁ. Characterization of TRB proteins in the moss Physcomitrium patens. In The Czech Plant Nucleus Workshop 2023. 2023.

SCHINDLER, Ondřej, Karel BERKA, Alessio CANTARA, Aleš KŘENEK, Dominik TICHÝ, Tomáš RAČEK and Radka SVOBODOVÁ. αCharges: partial atomic charges for AlphaFold structures in high quality. Nucleic Acids Research. Oxford: Oxford University Press, 2023, vol. 51, W1, p. "W11"-"W16", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad349.

GOTTUMUKKALA, Narendra Varma, Aneta LEDEREROVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity py preventing CD19 antigen escape in relapsed models. In EHA Meeting – 5th European CAR T-cell Meeting, Rotterdam, Nizozemsko. 2023.

TOUL, Martin, Veronika SLONKOVÁ, Jan MIČAN, Adam Paulin URMINSKÝ, Maria TOMKOVA, Erik SEDLÁK, David BEDNÁŘ, Jiří DAMBORSKÝ, Lenka HERNYCHOVÁ and Zbyněk PROKOP. Identification, characterization, and engineering of glycosylation in thrombolytics. Biotechnology Advances. OXFORD: Elsevier, 2023, vol. 66, September 2023, p. 1-23. ISSN 0734-9750. Available from: https://dx.doi.org/10.1016/j.biotechadv.2023.108174.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Identification of novel targets that upregulate CD20 expression in rituximab-resistant cells with the use of genomewide CRISPR screening. In XX. International Workshop on CLL (iwCLL 2023), Boston, USA. 2023.

LYČKA, Martin, Petr FAJKUS, Leon P. JENNER, Eva SÝKOROVÁ, Miloslava FOJTOVÁ and Vratislav PESKA. Identification of the Sequence and the Length of Telomere DNA. In Tony Heitkam, Sònia Garcia. Plant Cytogenetics and Cytogenomics : Plant Cytogenetics and Cytogenomics. New York: Springer Nature, 2023, p. 285-302. Methods in Molecular Biology. ISBN 978-1-0716-3225-3. Available from: https://dx.doi.org/10.1007/978-1-0716-3226-0_18.

LADUNGOVÁ, Adriana, Daniel BUŠA, Yusuf LODHI, Jan HÝL, Martin ČULEN and Michal ŠMÍDA. Identificationof novel therapeutic options for venetoclax-resistant AML cells through drug repurposing. In 23. Pražské hematologické dny, Praha. 2023.

BROM, Tomáš, Martin STOJASPAL, Tomáš JANOVIČ, Ivona NEČASOVÁ, Pavel VEVERKA and Ctirad HOFR. Insight into inherited anemia CDA-I: disease-associated mutations disrupt Codanin1-CDIN1 complex. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of the Czech Infrastructure for Integrative Structural Biology. 2023.

TREBICHALSKÁ, Zuzana, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In-situ cryo-electron tomography of Enterovirus replication. In In situ structural biology: from cryo-EM to multi-scale modelling. 2023.

BERA, Krishnendu and Jozef HRITZ. Interaction of selected drugs at dimer interface of human 14-3-3ζ protein. In 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

DOBROVODSKÝ, Daniel, Aleš DAŇHEL, Emmanuelle MOTHES-MARTIN, Genevieve PRATVIEL, Daniel RENČIUK, Jean-Louis MERGNY and Miroslav FOJTA. Interfacial behaviour of oligodeoxynucleotides prone to G-quadruplex formation on negatively charged electrode surface monitored by electrochemical probes. Electrochimica Acta. Elsevier, 2023, vol. 442, February, p. 1-8. ISSN 0013-4686. Available from: https://dx.doi.org/10.1016/j.electacta.2023.141878.

DAS, Amiyaranjan, Julia BARTULI, Clemens GRIMM, Utz FISCHER and Gabriel DEMO. INTERPLAY BETWEEN VIRAL TRANSCRIPTION AND HOST TRANSLATION. In NIVB meeting 2023. 2023. ISSN 2336-7210.

SVOBODA, Tomáš, Radka SVOBODOVÁ, David ANTOŠ, Adrián ROŠINEC and Aleš KŘENEK. Introduction to Onedata at CEITEC MU and in Czech National Repository Platform. In MATECHat meeting. 2023.

JABŮREK, Michal, Šárka PORTEŠOVÁ, Ondřej STRAKA, Petr PALÍŠEK and Ivan ČERNICKÝ. Invenio : inovativní a zábavný způsob diagnostiky kognitivních schopností. Školní poradenství v praxi. Praha: Wolters Kluwer, 2023, vol. 10, No 5, p. 13-18. ISSN 2336-3436.

BUČEKOVÁ, Gabriela, Viktoriia DOSHCHENKO, Vladimír HORSKÝ and Radka SVOBODOVÁ. Invesigating the rare conformation of small rings in ligands. In XXII. Meeting of Biochemists and Molecular Biologists. 2023.

BEHERA, Susrisweta, Lukáš VESELÝ, Radim ŠTŮSEK, Astrid HAUPTMANN, Thomas LOERTING and Dominik HEGER. Investigating freezing-induced acidity changes in citrate buffers. International Journal of Pharmaceutics. Elsevier B.V., 2023, vol. 643, August, p. 1-12. ISSN 0378-5173. Available from: https://dx.doi.org/10.1016/j.ijpharm.2023.123211.

BALAKHONOVA, Veronika, Tereza DOBISOVÁ, Zuzana BENEDIKTY, Klara PANZAROVA, Jaromir PYTELA, Radka KOCI, Ioannis SPYROGLOU, Ingrid KOVÁČOVÁ, Dominique ARNAUD, Jan SKALÁK, Martin TRTILEK and Jan HEJÁTKO. iReenCAM: automated imaging system for kinetic analysis of photosynthetic pigment biosynthesis at high spatiotemporal resolution during early deetiolation. Frontiers in Plant Science. Frontiers Media SA, 2023, vol. 14, April, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1093292.

LEGARTOVÁ, Soňa, Paolo FAGHERAZZI, Pratik GOSWAMI, Václav BRÁZDA, Gabriela LOCHMANOVÁ, Irena KOUTNÁ and Eva BÁRTOVÁ. Irradiation potentiates p53 phosphorylation and p53 binding to the promoter and coding region of the TP53 gene. Biochimie. Elsevier, 2023, vol. 204, January, p. 154-168. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2022.09.013.

JABŮREK, Michal, Šárka PORTEŠOVÁ, Ondřej STRAKA and Petr PALÍŠEK. Jak identifikovat mimořádně nadané děti objektivně a zábavně? Pomocí diagnostického systému Invenio (How to identify exceptionally gifted children in an objective and fun way? With the Invenio diagnostic system). E-psychologie. Praha: Českomoravská psychologická společnost, 2023, vol. 17, No 2, p. 88-93. ISSN 1802-8853. Available from: https://dx.doi.org/10.29364/epsy.472.

PORUBSKÁ, Jana, Veronika HORSKÁ, Vladimír HORSKÝ and Radka SVOBODOVÁ. Journal metrics and structures: A dynamic interplay. In XXII. Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

KUČINSKAS, Gytis, Hana NEDOZRÁLOVÁ and Aneta GREŇOVÁ. Jozef Hritz. In Jozef Hritz, Ph.D. 2023.

SÁBLÍK, Leoš. Kartičky na diferenciaci výuky – názvosloví, výpočty, Umělá inteligence jako nástroj učitele chemie I. In Setkání učitelů chemie 29. 6. 2023. 2023.

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STRMISKOVÁ, Johana, Nasim IZADI, Ludmila MORÁŇOVÁ, Ravery Jovinary SEBUYOYA, Milan ANTON and Martin BARTOŠÍK. LAMP-based assay for human papillomavirus diagnostics coupled with electrochemical detection. In 74th Annual Meeting of the International Society of Electrochemistry. 2023.

BOHOŠOVÁ, Júlia, Kateřina KOŽELKOVÁ, Dagmar AL TUKMACHI, Karolína TRACHTOVÁ, Ondřej NAAR, Michaela RUČKOVÁ, Eva KOLÁRIKOVÁ, Michal STANÍK, Alexandr POPRACH and Ondřej SLABÝ. Long non-coding RNAs enable precise diagnosis and prediction of early relapse after nephrectomy in patients with renal cell carcinoma. Journal of cancer research and clinical oncology. NEW YORK: Springer, 2023, vol. 149, No 10, p. 7587-7600. ISSN 0171-5216. Available from: https://dx.doi.org/10.1007/s00432-023-04700-7.

RAČEK, Tomáš, Tomáš SVOBODA and Radka SVOBODOVÁ. Management of life-science data and their metadata. In XXII. setkání biochemiků a molekulárních biologů. 2023.

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BERA, Krishnendu and Thomas Peter FELLMETH. Study of conformational changes of Tau(210-240) upon multiple phosphorylations using molecular dynamics simulations. In ITAT Conference. 2023. ISBN 978-80-8147-132-2.

TUŽINČIN, Dávid, Nicola SALVI, Vojtěch ZAPLETAL, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Study of the Dynamics of Flexible Subunits of RNA Polymerase from Bacillus subtilis. 2023.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Jiří DAMBORSKÝ, Jan BREZOVSKÝ, Lukáš DANIEL, Alexandra SISÁKOVÁ, Fedor NIKULENKOV and Lumír KREJČÍ. Substituted aminothiazoles as inhibitors of nucleases. 2023.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Jiří DAMBORSKÝ, Jan BREZOVSKÝ, Lukáš DANIEL, Alexandra SISÁKOVÁ, Fedor NIKULENKOV and Lumír KREJČÍ. Substituted aminothiazoles as inhibitors of nucleases. 2023.

LYČKA, Martin, Miloš BARTÁK, Ondřej HELIA, Stanislav KOPRIVA, Dana MORAVCOVÁ, Josef HÁJEK, Lukáš FOJT, Richard ČMELÍK, Jiří FAJKUS and Miloslava FOJTOVÁ. Sulfate supplementation affects nutrient and photosynthetic status of Arabidopsis thaliana and Nicotiana tabacum differently under prolonged exposure to cadmium. Journal of Hazardous Materials. Elsevier Science BV., 2023, vol. 445, March, p. 1-16. ISSN 0304-3894. Available from: https://dx.doi.org/10.1016/j.jhazmat.2022.130527.

GROMBIŘÍKOVÁ, Hana, Viktor BÍLY, Přemysl SOUČEK, Michal KRAMÁREK, Roman HAKL, Lucie BALLONOVÁ, Barbora RAVCUKOVA, Dita RICNA, Karolína KOŽENÁ, Lucie KRATOCHVÍLOVÁ, Marta SOBOTKOVA, Radana ZACHOVA, Pavel KUKLÍNEK, Pavlina KRALICKOVA, Irena KRCMOVA, Jana HANZLIKOVA, Martina VACHOVA, Olga KRYSTUFKOVA, Eva DANKOVA, Milos JESENAK, Martina NOVACKOVA, Michal SVOBODA, Jiří LITZMAN and Tomáš FREIBERGER. Systematic Approach Revealed SERPING1 Splicing-Affecting Variants to be Highly Represented in the Czech National HAE Cohort. Journal of Clinical Immunology. NEW YORK: SPRINGER, 2023, vol. 43, No 8, p. 1974-1991. ISSN 0271-9142. Available from: https://dx.doi.org/10.1007/s10875-023-01565-w.

BARUNÍK, Jozef, Hynek CÍGLER, Jiří DOBEŠ, David ELEK, Ladislav FRÜHAUF, Dominik HAJDUK, Jan KLEŇKA, Jiří POMIKÁLEK and Jan RYGL. TA ČR HOP: Závěrečná zpráva (Statistické a data miningové analýzy hodnocení projektů oponenty). Praha: České priority, z.ú., 2023, 106 pp.

KNIGHT, Andrea, Josef HOUSER, Vilém JURÁŇ, Václav VYBÍHAL, Pavel FADRUS, Martin SMRČKA and Martin PISKÁČEK. Targeting undruggable oncoproteins c-Myc and N-Myc by the 9aaTADs. In Advanced Therapies 2023, 14-15 March 2023, ExCeL, London. 2023.

JEDLIČKA, Pavel, Ivan VANÁT, Matej LEXA, Marie KRÁTKÁ and Eduard KEJNOVSKÝ. TE-greedy-nester: a tool for reconstruction of transposable elements in plant genomes. Online. In Workshop on Bioinformatics and Computational Biology (WBCB 2023). 2023, p. 12-12.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Differential scanning fluorimetry demo. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Mass photometry workshop: Demonstration of instrument for molecular size analysis. 2023.

ZÁVODNÍK, Michal, Petr FAJKUS, Michal FRANEK, David KOPECKÝ, Sonia GARCIA, Steven DODSWORTH, Andres OREJUELA, Agata Magdalena KILAR, Jiri PTACEK, Martin MÁTL, Anna HÝSKOVÁ, Jiří FAJKUS and Vratislav PEŠKA. Telomerase RNA gene paralogs in plants - the usual pathway to unusual telomeres. New Phytologist. HOBOKEN: Blackwell Science, 2023, vol. 239, No 6, p. 2353-2366. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19110.

FAJKUS, Petr, Matej ADÁMIK, Andrew D L NELSON, Agata Magdalena KILAR, Michal FRANEK, Michal BUBENÍK, Radmila Capkova FRYDRYCHOVA, Alena VOTAVOVA, Eva SÝKOROVÁ, Jiří FAJKUS and Vratislav PEŠKA. Telomerase RNA in Hymenoptera (Insecta) switched to plant/ciliate-like biogenesis. Nucleic acids research. Oxford: Oxford University Press, 2023, vol. 51, No 1, p. 420-433. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac1202.

HULÍNOVÁ, Daniela, Šimon FARKAŠ, Aleš HAMPL, Miloslava FOJTOVÁ and Irena KOUTNÁ. Telomere Length In Human Pluripotent Stem Cells. In ISSCR Annual meeting 2023, Boston, USA. 2023.

SHEN, Fei, Shixiao XU, Shen QI, Changwei BI and Martin LYSÁK. The allotetraploid horseradish genome provides insights into subgenome diversification and formation of critical traits. Nature Communications. Berlin: Nature Research, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-39800-y.

FARHAT, Perla, Terezie MALÍK MANDÁKOVÁ, Jan DIVÍŠEK, Hiroshi KUDOH, Dmitry A. GERMAN and Martin LYSÁK. The evolution of the hypotetraploid Catolobus pendulus genome – the poorly known sister species of Capsella. Frontiers in Plant Science. Lausanne (Switzerland): Frontiers Media SA, 2023, vol. 14, May, p. 1-17. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2023.1165140.

MARTIŠOVÁ, Andrea, Petr VOŇKA and Roman HRSTKA. The importance of AGR2 in ER stress regulation and its impact on cancer cells. In Proteostasis: From translation to degradation. 2023.

BEANI POIANI, Silvana, Pavel DOBEŠ, Martin KUNC, Mayara Cristina PEREIRA, Odair Correa BUENO and Pavel HYRŠL. The Influence of Selected Insecticides on the Oxidative Response of Atta sexdens (Myrmicinae, Attini) Workers. Neotropical Entomology. Springer, 2023, vol. 52, No 6, p. 1088-1099. ISSN 1519-566X. Available from: https://dx.doi.org/10.1007/s13744-023-01077-7.

HUANG, Yile, Xinyi GUO, Kang ZHANG, Terezie MALÍK MANDÁKOVÁ, Feng CHENG and Martin LYSÁK. The meso-octoploid Heliophila variabilis genome sheds a new light on the impact of polyploidization and diploidization on the diversity of the Cape flora. Plant Journal. Wiley, 2023, vol. 116, No 2, p. 446-466. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.16383.

HOUSER, Josef, Kristína JENDRUCHOVÁ, Andrea KNIGHT and Martin PISKÁČEK. The NFkB activation domain is 14-amino-acid-long variant of the 9aaTAD. The Biochemical journal. LONDON: PORTLAND PRESS LTD, 2023, vol. 480, No 5, p. 297-306. ISSN 0264-6021. Available from: https://dx.doi.org/10.1042/BCJ20220605.

HUANG, Yile. The pathways of whole-genome duplications, diploidization, and descending dysploidy in the Biscutelleae (Brassicaceae). In ANANI, Hussein, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO, Manuel PORETTI, Christian PARISOD and Martin LYSÁK. Polyploidy 2023. 2023.

LONG, Qilin, Marek ŠEBESTA, Kateřina ŠEDOVÁ, Vojtěch HALUZA, Adele ALAGIA, Zhichao LIU, Richard ŠTEFL and Monika GULLEROVA. The phosphorylated trimeric SOSS1 complex and RNA polymerase II trigger liquid-liquid phase separation at double-strand breaks. Cell Reports. Elsevier, 2023, vol. 42, No 12, p. 1-25. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.113489.

BOHÚNOVÁ, Michaela, Andrea MAREČKOVÁ, Lenka BRYJOVÁ, Ivona BLAHÁKOVÁ, Robert HELMA, Kamila RÉBLOVÁ, Libor ČERVINEK, Michael DOUBEK, Šárka POSPÍŠILOVÁ and Jana KOTAŠKOVÁ. The role of clonal hematopoiesis in the development of myeloid neoplasms post cytotoxic therapy - prospective study. In EHA-SWG Scientific Meeting on MDS/MPN/AML: Commonalities and Differences of Myeloid Neoplasms, Budapest, Maďarsko. 2023.

BOHÚNOVÁ, Michaela, Andrea MAREČKOVÁ, Lenka BRYJOVÁ, Ivana JEŽÍŠKOVÁ, A. FOLTA, Šárka PAVLOVÁ, Ivona BLAHÁKOVÁ, Robert HELMA, Jakub HYNŠT, Markéta BEDNAŘÍKOVÁ, Barbora WEINBERGEROVÁ, Libor ČERVINEK, Michael DOUBEK, Šárka POSPÍŠILOVÁ and Jana KOTAŠKOVÁ. The role of clonal hematopoiesis variants in the development of myeloid neoplasms post cytotoxic therapy - case series. In EHA-SWG Scientific Meeting on MDS/MPN/AML: Commonalities and Differences of Myeloid Neoplasms, Budapest, Maďarsko. 2023.

FARIA ZENI, Pedro, Michaela MEDKOVÁ, K. TRACHTOVÁ, L. JANSKÁ, Václav ŠEDA, Eva HOFERKOVÁ, Nandan Mysore VARADARAJAN, Sonali SHARMA, Aleš OBRDLÍK, Štěpánka VAŇÁČOVÁ, A. MAIQUES-DIAZ, JI. MARTÍN-SUBERO and Marek MRÁZ. The role of long non-coding RNAs in BCR-mediated CLL activation. In CEITEC PhD Conference, Brno. 2023.

MEDKOVÁ, Michaela, Pedro FARIA ZENI, L. JANSKÁ, Sonali SHARMA, Androniki MICHAELOU, Václav ŠEDA, Lenka KOŠŤÁLOVÁ, Laura ONDRIŠOVÁ, V. PALUŠOVÁ, Eva VOJÁČKOVÁ, Daniel FILIP, Josef VEČEŘA, Miroslav BOUDNÝ, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. The role of long non-coding RNAs in the microenvironmental interactions of malignant B cells. In CEITEC PhD conference, Brno. 2023.

MEDKOVÁ, Michaela, Pedro FARIA ZENI, L. JANSKÁ, Péter KACZ, Sonali SHARMA, Androniki MICHAELOU, Václav ŠEDA, Lenka KOŠŤÁLOVÁ, Laura ONDRIŠOVÁ, Veronika PALUŠOVÁ, Eva VOJÁČKOVÁ, Daniel FILIP, Josef VEČEŘA, Miroslav BOUDNÝ and Marek MRÁZ. The role of long non-coding RNAs in the microenvironmental interactions of malignant B cells. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

MAHRÍK, Lenka, Barbora ŠTEFANOVIE, Anna MARESOVA, Jarmila PRINCOVA, Peter KOLESÁR, Edit LELKES, Celline FAUX, Dominique HELMLINGER, Martin PREVOROVSKY and Jan PALEČEK. The SAGA histone acetyltransferase module targets SMC5/6 to specific genes. EPIGENETICS & CHROMATIN. LONDON: BMC, 2023, vol. 16, No 1, p. 1-16. ISSN 1756-8935. Available from: https://dx.doi.org/10.1186/s13072-023-00480-z.

TATÍČKOVÁ, Martina, Zuzana TREBICHALSKÁ, Drahomíra KYJOVSKÁ, Pavel OTEVŘEL, Soňa KLOUDOVÁ and Zuzana HOLUBCOVÁ. The ultrastructural nature of human oocytes' cytoplasmic abnormalities and the role of cytoskeleton dysfunction. F&S science. New York: Elsevier, 2023, vol. 4, No 4, p. 267-278. ISSN 2666-335X. Available from: https://dx.doi.org/10.1016/j.xfss.2023.09.002.

PORTEŠOVÁ, Šárka, Michal JABŮREK, Karel REČKA, Ondřej STRAKA and Wayne D. PARKER. To Click, or Not to Click? Perfectionism and the Association of Gender and Competitiveness on Game-Point Monitoring. Technology, Knowledge and Learning. Dordrecht: Spriger, 2023, vol. 28, No 4, p. 1841-1870. ISSN 2211-1662. Available from: https://dx.doi.org/10.1007/s10758-022-09625-7.

NOVOTNÁ, Pavla, Václav BAČOVSKÝ, Aline MUYLE and Andreas HOUBEN. TOOLS TO STUDY DOSAGE COMPENSATION AND PARENTAL IMPRINTING IN SILENE LATIFOLIA. In Methods in Plant Sciences. 2023.

TREBICHALSKÁ, Zuzana, Tibor FÜZIK, Pavel KŘEPELKA, Jiří NOVÁČEK and Pavel PLEVKA. Towards the identification of Enterovirus replication cycle in situ. In 6th Austrian CRYO-EM SYMPOSIUM. 2023.

MRÁZ, Marek, Laura ONDRIŠOVÁ, Václav ŠEDA, Eva HOFERKOVÁ, G. CHIODIN, Kryštof HLAVÁČ, Lenka KOŠŤÁLOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Pedro ZENI, Jan OPPELT, Anna PANOVSKÁ, Karla PLEVOVÁ, Šárka POSPÍŠILOVÁ, M. ŠIMKOVIČ, F. VRBACKÝ, Daniel LYSÁK, SM. FERNANDES, A. DAVIDS, A. MAIQUES-DIAZ, S. CHARALAMPOPOULOU, J. MARTIN-SUBERO, J. BROWN, Michael DOUBEK, F. FORCONI and Jiří MAYER. Transcription factor FoxO1 Mediates Adaptive Increase in Akt Activity and Cell Survival During BCR Inhibitor Therapy in CLL. In XX. International Workshop on CLL (iwCLL 2023), Boston, USA. 2023.

JEDLIČKOVÁ, Veronika, Václav HEJRET, Martin DEMKO, Pavel JEDLIČKA, Marie ŠTEFKOVÁ and Helene ROBERT BOISIVON. Transcriptome analysis of thermomorphogenesis in ovules and during early seed development in Brassica napus. BMC Genomics. London: BioMed Central Ltd, 2023, vol. 24, No 1, p. 1-15. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-023-09316-2.

VACULÍK, Ondřej, Eliška CHALUPOVÁ, Katarína GREŠOVÁ, Tomáš MAJTNER and Panagiotis ALEXIOU. Transfer Learning Allows Accurate RBP Target Site Prediction with Limited Sample Sizes. Biology. MDPI, 2023, vol. 12, No 10, p. 1-19. ISSN 2079-7737. Available from: https://dx.doi.org/10.3390/biology12101276.

ONDRIŠOVÁ, Laura, Václav ŠEDA, Eva HOFERKOVÁ, Lenka KOŠŤÁLOVÁ, Kryštof HLAVÁČ, Petra PAVELKOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Pedro FARIA ZENI, Karla PLEVOVÁ, Daniel FILIP, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. Transkripční faktor FoxO1 v adaptaci chronické lymfocytární leukémie na cílenou léčbu. (Transcription factor FoxO1 in adaptation of chronic lymphocytic leukemia to targeted therapy.). In XXVI. Biologické dny, Brno. 2023.

VOLAKHAVA, Anastasiya, Šárka PAVLOVÁ, Kristýna ZÁVACKÁ, Karol PÁL, Ilgar MAMEDOV, Karla PLEVOVÁ and Šárka POSPÍŠILOVÁ. Uncovering retroelement activity in hematological malignancies. In CEITEC PhD Conference, Brno. 2023.

HRUŠKA, Pavel, Jan KUČERA, Daniela KURUCZOVÁ, Marek BUZGA, Matej PEKAŘ, Pavol HOLECZY, David POTĚŠIL, Zbyněk ZDRÁHAL and Julie DOBROVOLNÁ. Unraveling adipose tissue proteomic landscapes in severe obesity: insights into metabolic complications and potential biomarkers. AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM. UNITED STATES: AMER PHYSIOLOGICAL SOC, 2023, vol. 325, No 5, p. "E562"-"E580", 19 pp. ISSN 0193-1849. Available from: https://dx.doi.org/10.1152/ajpendo.00153.2023.

PÍREK, Pavlína, Karolína KRYŠTOFOVÁ, Ingrid KOVÁČOVÁ, Anna KROMEROVÁ, Dagmar ZACHOVÁ, Ondřej HELIA, Klara PANZAROVA, Jiří FAJKUS, Zbyněk ZDRÁHAL, Gabriela LOCHMANOVÁ and Miloslava FOJTOVÁ. Unraveling Epigenetic Changes in A. thaliana Calli: Impact of HDAC Inhibitors. PLANTS-BASEL. BASEL: MDPI, 2023, vol. 12, No 24, p. 1-16. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants12244177.

PRABHULLACHANDRAN, Unnikannan, Ivana URBÁNKOVÁ, Kateřina MÁCOVÁ, Jan HEJÁTKO and Helene ROBERT BOISIVON. UNRAVELING THE PROCESS OF THERMOREGULATION DURING THE SEED DEVELOPMENT IN BRASSICA NAPUS. 2023.

ITTERHEIMOVÁ, Petra, Věra DOSEDĚLOVÁ and Petr KUBÁŇ. Use of metal nanoparticles for preconcentration and analysis of biological thiols. Electrophoresis. Wiley, 2023, vol. 44, 1-2, p. 135-157. ISSN 0173-0835. Available from: https://dx.doi.org/10.1002/elps.202200142.

GREŠOVÁ, Katarína, Ondřej VACULÍK and Panagiotis ALEXIOU. Using Attribution Sequence Alignment to Interpret Deep Learning Models for miRNA Binding Site Prediction. Biology. Basel: MDPI, 2023, vol. 12, No 3, p. 1-16. ISSN 2079-7737. Available from: https://dx.doi.org/10.3390/biology12030369.

ČERMÁK, Milan, Tatiana FRITZOVÁ, Vít RUSŇÁK and Denisa ŠRÁMKOVÁ. Using relational graphs for exploratory analysis of network traffic data. Forensic Science International: Digital Investigation. 2023, vol. 45, S, p. 1-10. ISSN 2666-2825. Available from: https://dx.doi.org/10.1016/j.fsidi.2023.301563.

MACHÁČKOVÁ, Táňa, Petra VYCHYTILOVÁ, Marie BOUDNÁ, Karolína TRACHTOVÁ, Marketa PAVLIKOVA, Jan KOTOUCEK, Jana HALÁMKOVÁ, Dagmar AL TUKMACHI, Jiří ŠÁNA, Petra POKORNÁ, Milana ŠACHLOVÁ and Ondřej SLABÝ. Utility of RNA sequencing for transcriptome analysis of small extracellular vesicles derived from blood sera of colorectal cancer patients. In 114th Annual Meeting of the American Association for Cancer Research (AACR). 2023. Available from: https://dx.doi.org/10.1158/1538-7445.AM2023-6709.

PORUBIAKOVÁ, Otília, Jan HAVLÍK, Indu ., Michal ŠEDÝ, Veronika PŘEPECHALOVÁ, Martin BARTAS, Stefan BIDULA, Jiří ŠŤASTNÝ, Miroslav FOJTA and Václav BRÁZDA. Variability of Inverted Repeats in All Available Genomes of Bacteria. Microbiology Spectrum. American Society for Microbiology, 2023, vol. 11, No 4, p. 1-11. ISSN 2165-0497. Available from: https://dx.doi.org/10.1128/spectrum.01648-23.

DAS, Amiyaranjan, Julia BARTULI, Clemens GRIMM, Utz FISCHER and Gabriel DEMO. Viral transcription-translation coupling in mammalian cells. In XIX Discussions in Structural Molecular Biology. 2023.

DOBEŠ, Pavel. Vliv roztoče Varroa destructor na fyziologii a imunitu včely medonosné. Moderní včelař. Pracovní společnost nástavkových včelařů CZ, z. s., 2023, No 3, p. 24-26. ISSN 1214-5793.

DOBEŠ, Pavel. Vliv roztoče Varroa destructor na fyziologii a imunitu včely medonosné. Dymák. VINGUSTE, s. r. o., 2023, vol. 4, No 2, p. 14-16. ISSN 2644-6448.

PORC, Jakub Paweł, Tomáš REIGL, Veronika NAVRKALOVÁ, Jakub HYNŠT, Karol PÁL, Kamila STRÁNSKÁ, Jana KOTAŠKOVÁ and Šárka POSPÍŠILOVÁ. Web-based bioinformatic tool LYNX: LYmphoid NeXt-generation sequencing data analysis and visualization in hematological malignancies. In EMBL Conference Cancer Genomics 2023, Heidelberg, Německo. 2023.

KRUŽLICOVÁ, Jana, Václav BAČOVSKÝ, Markéta BODLÁKOVÁ, Stephen WRIGHT and Roman HOBZA. Weird and wonderful – an origin of sex chromosomes in two races of Rumex hastatulus. In Plant Chromosome Biology Cytogenetics meeting 2023. 2023.

WIMMEROVÁ, Michaela. XXII. setkání biochemiků a molekulárních biologů. Sborník příspěvků (XXII. Meeting of Biochemists and Molecular Biologists. Proceedings). 1st ed. Brno: Masarykova univerzita, 2023. ISBN 978-80-280-0409-5.

RAČEK, Tomáš. Zpracování dat na CEITECu. In SitSem - Seminář laboratoře Sitola. 2023.

KOZELEKOVÁ, Aneta, Lucia IĽKOVIČOVÁ, Radek CRHA, Alena HOFROVÁ and Jozef HRITZ. 14-3-3 dimer vs monomer – (dis)similarities in Tau protein binding. In EBSA Congress 2023 in Stockholm. 2023. Available from: https://dx.doi.org/10.1007/s00249-023-01668-7.

BAĎUROVÁ, Lucia, Katarína POLČICOVÁ, Božena OMASTA, Ingrid OVEČKOVÁ, Eva KOCIANOVÁ and Jana TOMÁŠKOVÁ. 2-Deoxy-D-glucose inhibits lymphocytic choriomeningitis virus propagation by targeting glycoprotein N-glycosylation. Virology Journal. LONDON: BMC, 2023, vol. 20, No 1, p. 1-18. ISSN 1743-422X. Available from: https://dx.doi.org/10.1186/s12985-023-02082-3.

KLINCOVÁ, Martina, Dagmar ŠTĚPÁNKOVÁ, Ivana SCHRÖDEROVÁ, Eva KLABUSAYOVÁ, Edita OŠŤÁDALOVÁ, Iveta VALÁŠKOVÁ, Lenka FAJKUSOVÁ, Jana ZÍDKOVÁ, Renata GAILLYOVÁ and Petr ŠTOURAČ. 20 let diagnostiky maligní hypertermie v České a Slovenské republice. (20 years of malignant hyperthermia in Czechia and Slovakia). ANESTEZIOLOGIE A INTENZIVNI MEDICINA. CZECH REPUBLIC: NAKLADATELSKE STREDISKO C L S J E PURKYNE, 2023, vol. 34, No 3, p. 103-109. ISSN 1214-2158. Available from: https://dx.doi.org/10.36290/aim.2023.045.

NOVOTNÝ, Jan and Radek MAREK. 36th Central European NMR Meeting, NMR Valtice 2023. 2023.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Jiří DAMBORSKÝ, Jan BREZOVSKÝ, Lukáš DANIEL, Alexandra SISÁKOVÁ, Fedor NIKULENKOV and Lumír KREJČÍ. ヌクレアーゼの阻害剤としての置換アミノチアゾール (Substituted aminothiazoles as inhibitors of nucleases). 2022.

PARUCH, Kamil, Benoit Jean-Pierre CARBAIN, Štěpán HAVEL, Vít VŠIANSKÝ, Fedor NIKULENKOV and Lumír KREJČÍ. ヌクレアーゼの阻害剤としての置換プロパンアミド (Substituted propanamides as inhibitors of nucleases). 2022.

LADUNGOVÁ, Adriana, Daniel BUŠA, Yusuf LODHI, Jan HÝL, Martin ČULEN and Michal ŠMÍDA. . Drug repurposing for venetoclax-resistant acute myeloid leukemia. In PhD retreat 2022, Telč. 2022.

KLINCOVÁ, Martina, Dagmar ŠTĚPÁNKOVÁ, Ivana SCHRÖDEROVÁ, Lenka FAJKUSOVÁ and Petr ŠTOURAČ. A description of the largest Slavonic group of patients investigated for risk of malignant hyperthermia. A retrospective observational national cohort study. In 40th Annual Meeting, Harrogate, Anglie, 25.-27.5.2022. 2022.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. A hunting strategy and virion structure of P. aeruginosa bacteriophage JBD30 revealed by cryo-electron microscopy. In The XVIII Discussions in Structural Molecular Biology and the 5th User Meeting of CIISB. 2022.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. A hunting strategy and virion structure of phage JBD30 revealed by cryo-electron microscopy. In Viruses of Microbes 2022. 2022.

DOSEDĚLOVÁ, Věra, František FORET, Martina DOUBKOVÁ, Kristián BRAT and Petr KUBÁŇ. A novel temperature-controlled open source microcontroller based sampler for collection of exhaled breath condensate in point-of-care diagnostics. Talanta. Elsevier, 2022, vol. 237, January, p. 1-8. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2021.122984.

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HAJJI, Khadija, Jiří SEDMÍK, Anna CHERIAN, Damiano AMORUSO, Liam KEEGAN and Mary Anne O'CONNELL. ADAR2 enzymes: efficient site-specific RNA editors with gene therapy aspirations. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 10, p. 1281-1297. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079266.122.

SCHINDLER, Ondřej, Tomáš RAČEK and Radka SVOBODOVÁ. Alphacharges - a web service for calculating QM-like partial atomic charges for AlphaFold proteins. In XXI. setkání biochemiků a molekulárních biologů. 2022.

NIEDZIELA, Agnieszka, Lucyna DOMZALSKA, Wioletta DYNKOWSKA, Markéta PERNISOVÁ and Krystyna RYBKA. Aluminum Stress Induces Irreversible Proteomic Changes in the Roots of the Sensitive but Not the Tolerant Genotype of Triticale Seedlings. PLANTS-BASEL. BASEL: MDPI, 2022, vol. 11, No 2, p. 1-17. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants11020165.

VLADEJIC, Jovanka, Fen YANG, Eva Dvořák TOMAŠTÍKOVÁ, Jaroslav DOLEŽEL, Jan PALEČEK and Aleš PEČINKA. Analysis of BRCT5 domain-containing proteins reveals a new component of DNA damage repair in Arabidopsis. Frontiers in Plant Science. Lausanne: Frontiers Media S.A., 2022, vol. 13, December, p. 1-14. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.1023358.

AGERBIRK, Niels, David I. PATTISON, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Sabine MONTAUT and Dan STAERK. Ancient Biosyntheses in an Oil Crop: Glucosinolate Profiles in Limnanthes alba and Its Relatives (Limnanthaceae, Brassicales). Journal of Agricultural and Food Chemistry. American Chemical Society, 2022, vol. 70, No 4, p. 1134-1147. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.1c07299.

BOISTEAU, Emeric, Céline POSSEME, Federico Di MODUGNO, Julien EDELINE, Cédric COULOUARN, Roman HRSTKA, Andrea MARTIŠOVÁ, Frédéric DELOM, Xavier TRETON, Leif A. ERIKSSON, Eric CHEVET, Astrid LIÈVRE and Eric OGIER-DENIS. Anterior gradient proteins in gastrointestinal cancers: from cell biology to pathophysiology. Oncogene. Springer Nature, 2022, vol. 41, No 42, p. 4673-4685. ISSN 0950-9232. Available from: https://dx.doi.org/10.1038/s41388-022-02452-1.

LIPOVÝ, Břetislav, Filip RAŠKA, Jakub HOLOUBEK, Martin KNOZ, Martin HLADÍK, Tomáš KEMPNÝ, Lubomír JANDA, Šárka KOBZOVÁ, Lukáš VACEK, Filip RŮŽIČKA and Lucy VOJTOVÁ. Antimicrobials for future infection control and treatment: What clinicians need and what biotechnicians have. In International workshop on bone and soft tissues engineering, Reykjavik, ISL. 2022.

PŘIKRYLOVÁ, Klára, Eva SÝKOROVÁ and Miloslava FOJTOVÁ. ARM protein modulates the strength of the response to DNA damage in Arabidopsis. In 7th European Workshop on Plant Chromatin 2022. 2022.

RAČEK, Tomáš, Ondřej SCHINDLER, Lenka PTÁČNÍKOVÁ and Radka SVOBODOVÁ. Atomic Charge Calculator II – a web service for calculating partial atomic charges. In ENBIK2022. 2022. ISBN 978-80-7592-127-7.

MOR, Eliana, Markéta PERNISOVÁ, Max MINNE, Guillaume CERUTTI, Dagmar RIPPER, Jonah NOLF, Jennifer ANDRES, Laura RAGNI, Matias D. ZURBRIGGEN, Bert DE RYBEL and Teva VERNOUX. bHLH heterodimer complex variations regulate cell proliferation activity in the meristems of Arabidopsis thaliana. ISCIENCE. UNITED STATES: CELL PRESS, 2022, vol. 25, No 11, p. 105364-105382. ISSN 2589-0042. Available from: https://dx.doi.org/10.1016/j.isci.2022.105364.

BERA, Krishnendu. Binding and inhibitory effect of ravidasvir on 3CLpro of SARS-CoV-2: a molecular docking, molecular dynamics and MM/PBSA approach. Journal of Biomolecular Structure and Dynamics. Taylor & Francis, 2022, vol. 40, No 16, p. 7303-7310. ISSN 0739-1102. Available from: https://dx.doi.org/10.1080/07391102.2021.1896388.

FALGINELLA, Francesco Luca, Marek KRAVEC, Martina DRABINOVÁ, Petra PACLÍKOVÁ, Vítězslav BRYJA and Robert VÁCHA. Binding of DEP domain to phospholipid membranes: More than just electrostatics. Biochimica et Biophysica Acta (BBA) - Biomembranes. Amsterdam: Elsevier, 2022, vol. 1864, No 10, p. 1-12. ISSN 0005-2736. Available from: https://dx.doi.org/10.1016/j.bbamem.2022.183983.

ELIÁŠ, Sara, Jana HURYCHOVÁ, Pavel DOBEŠ, Duarte Nuno TOUBARRO TIAGO, Nelson SIMÕES and Pavel HYRŠL. Bioactive molecules produced by Heterorhabditis bacteriophora affects the phenoloxidase system of Galleria mellonella. In Seventh International Congress of Nematology. 2022.

ELIÁŠ, Sara, Jana ILGOVÁ, Jana HURYCHOVÁ, Paola ALBERT POYÁN, Pavel DOBEŠ, Martin KAŠNÝ and Pavel HYRŠL. Bioactive molecules produced by Heterorhabditis bacteriophora after in vitro stimulation by insect tissue. In 18th meeting IOBC/WPRS Working Group Microbial and Nematode Control of Invertebrate Pests. 2022.

HOFROVÁ, Alena, Karin RAVASZOVÁ and Jozef HRITZ. Biophysical characterization of extracellular carbonic anhydrase IX. In Instruct Biennial Structural Biology Conference. 2022.

JURAČKA, Stanislav, Barbora HRNČÍŘOVÁ, Barbora BURÝŠKOVÁ, Daniel GEORGIEV and Pavel DVOŘÁK. Building the SynBio community in the Czech Republic from the bottom up: You get what you give. Biotechnology Notes. Elsevier B.V., 2022, vol. 3, December, p. 124-134. ISSN 2665-9069. Available from: https://dx.doi.org/10.1016/j.biotno.2022.11.002.

PIKULOVÁ, Petra, Pia Yasmine JURČEK, Jan CHYBA, Michal KNOR, Anna HRUZÍKOVÁ, Jan NOVOTNÝ and Radek MAREK. Calculations of paramagnetic NMR chemical shifts in supramolecular host-guest systems of Ru(III) complexes. In 35th Central European NMR Meeting, VALTICE, 2022. 2022. ISBN 978-80-263-1717-3.

HLUCHÝ, Milan, Pavla GAJDUŠKOVÁ, Igor RUIZ DE LOS MOZOS, Michal RÁJECKÝ, Michael KLUGE, Benedict-Tilman BERGER, Zuzana SLABÁ, David POTĚŠIL, Elena WEISS, Jernej ULE, Zbyněk ZDRÁHAL, Stefan KNAPP, Kamil PARUCH, Caroline C. FRIEDEL and Dalibor BLAŽEK. CDK11 regulates pre-mRNA splicing by phosphorylation ofSF3B1. NATURE. ENGLAND: NATURE PORTFOLIO, 2022, vol. 609, No 7928, p. 829-834. ISSN 0028-0836. Available from: https://dx.doi.org/10.1038/s41586-022-05204-z.

LYSÁK, Martin. Celebrating Mendel, McClintock, and Darlington: On end-to-end chromosome fusions and nested chromosome fusions. Plant Cell. ROCKVILLE: AMER SOC PLANT BIOLOGISTS, 2022, vol. 34, No 7, p. 2475-2491. ISSN 1040-4651. Available from: https://dx.doi.org/10.1093/plcell/koac116.

SEDMÍK, Jiří, Tereza VÁŇOVÁ, Jan RAŠKA, Kateřina AMRUZ ČERNÁ, Veronika POSPÍŠILOVÁ, Veronika FEDOROVÁ, Petr FOJTÍK, Simona VOCHYÁNOVÁ, Hana KLÍMOVÁ, Klára PLEŠINGROVÁ, Petr TAUŠ, Karla PLEVOVÁ, Markéta NEZVEDOVÁ, Zdeněk SPÁČIL, Michaela CAPANDOVÁ, Petra ORVISKÁ, Z. BENEŠOVÁ, P. ABAFY, L. VALIHRACH and Jana HOUSEROVÁ. Cerebral organoids in disease modeling. In PhD retreat 2022, Telč. 2022.

SKLENÁŘ, Vladimír, Radovan FIALA, Jiří NOVÁČEK, Josef HOUSER, Jan PŘIBYL, Zbyněk ZDRÁHAL, Milan EŠNER, Michal MIKL, Boris TICHÝ, Vojtěch BYSTRÝ and Radka SVOBODOVÁ. CF Day Meeting. 2022.

NOVÁK, Jan, Táňa MACHÁČKOVÁ, Tereza NOVÁKOVÁ, Július GODAVA, Petr HUDE, Víta ŽAMPACHOVÁ, Karolína TRACHTOVÁ, Petr NĚMEC, Helena BEDÁŇOVÁ, Ondřej SLABÝ, Julie DOBROVOLNÁ, Lenka ŠPINAROVÁ and Jan KREJČÍ. Cirkulující mikroRNA jako biomarkery rejekce u pacientů po srdeční transplantaci: od profilování k validaci kandidátních molekul (Circulating microRNA as biomarkers of graft rejection in patients after heart transplantation: from microRNA profiling to candidate molecules validation). In 49. Pracovní setkání Komise experimentální kardiologie. 2022.

REIGL, Tomáš, Veronika NAVRKALOVÁ, Kamila STRÁNSKÁ, Jakub Paweł PORC, Karol PÁL, Šárka POSPÍŠILOVÁ, Nikos DARZENTAS and Karla PLEVOVÁ. CLLue: an interactive bioinformatic tool for data exploration, segregation, and important variables selection. In 11th ESLHO Symposium, Polsko, Katowice. 2022.

REIGL, Tomáš, Jakub Paweł PORC, Veronika NAVRKALOVÁ, Karol PÁL, Kamila STRÁNSKÁ, Nikos DARZENTAS, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. CLLue: an interactive bioinformatic tool for data exploration, segregation, and important variables selection. In CEITEC PhD Conference. 2022.

BROM, Tomáš, Martin STOJASPAL, Tomáš JANOVIČ, Ivona NEČASOVÁ, Pavel VEVERKA and Ctirad HOFR. Codanin1 and CDIN1 interaction: implications for inherited anemia progression. In XXI. setkání biochemiků a molekulárních biologů. 2022. ISBN 978-80-280-0136-0.

DOSTÁLOVÁ, Lenka, Adriana LADUNGOVÁ, Dominika ŠKRNOVÁ, Narendra Varma GOTTUMUKKALA, Yusuf LODHI and Michal ŠMÍDA. Combined drug and CRISPR/CAS9 screening reveals specific targets for SF3B1- and NOTCH1- mutated CLL cells. In EHA 2022 in HemaSphere 2022; 6(S3): 1012-1013. 2022.

KONEČNÁ, Kateřina, Lukáš TICHÝ and Tomáš FREIBERGER. Common rearrangements of the LDLR gene in the Czech population likely arise from one mutational event. In ESHG, Rakousko, Vídeň. 2022.

ALCARAZ, Alper James G., Shaina BARANIUK, Kamil MIKULÁŠEK, Bradley PARK, Taylor LANE, Connor BURBRIDGE, Jessica EWALD, David POTĚŠIL, Jianguo XIA, Zbyněk ZDRÁHAL, David SCHNEIDER, Doug CRUMP, Niladri BASU, Natacha HOGAN, Markus BRINKMANN and Markus HECKER. Comparative analysis of transcriptomic points-of-departure (tPODs) and apical responses in embryo-larval fathead minnows exposed to fluoxetine. ENVIRONMENTAL POLLUTION. ENGLAND: ELSEVIER SCI LTD, 2022, vol. 295, FEB, p. "118667", 12 pp. ISSN 0269-7491. Available from: https://dx.doi.org/10.1016/j.envpol.2021.118667.

BOŘILOVÁ LINHARTOVÁ, Petra, Iva KOTÁSKOVÁ, Petra ŠPLÍCHALOVÁ, Daniela GACHOVÁ, Dávid SZÁRAZ, Sabina CERULOVÁ, Ctirad MACHÁČEK, Petr ANDRLA, Jan LOCHMAN, Danuše FRIDRICHOVÁ, Zbyněk ZDRÁHAL, Petra VÍDEŇSKÁ and Zdeněk DANĚK. Comparative bacteriome analysis of tooth and cystic fluid in patients with apical periodontitis and radicular cyst – pilot study. In FEBS, 2022. 2022. Available from: https://dx.doi.org/10.1002/2211-5463.13440.

ATTULURI, Venkata Pardha S., Juan Francisco SANCHEZ LOPEZ, Lukáš MAIER, Kamil PARUCH and Helene ROBERT BOISIVON. Comparing the efficiency of six clearing methods in developing seeds of Arabidopsis thaliana. Plant Reproduction. Springer, 2022, vol. 35, No 4, p. 279-293. ISSN 2194-7953. Available from: https://dx.doi.org/10.1007/s00497-022-00453-4.

NAVRKALOVÁ, Veronika, Andrea MAREČKOVÁ, Michaela BOHÚNOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Jakub HYNŠT, Kamila RÉBLOVÁ, Šárka POSPÍŠILOVÁ, Andrea JANÍKOVÁ and Jana KOTAŠKOVÁ. Comparison of DNA and RNA-based approaches for the genetic characterization and stratification of patients with diffuse large B-cell lymphoma. In Mendel Genetics Conference 2022. 2022.

PŘIKRYLOVÁ, Klára, Agata Magdalena KILAR, Petra KOVÁČIKOVÁ, Jiří FAJKUS, Eva SÝKOROVÁ and Miloslava FOJTOVÁ. Compromised function of ARM, the interactor of Arabidopsis telomerase, suggests its role in stress responses. Plant Science. Elsevier, 2022, vol. 325, December, p. 1-16. ISSN 0168-9452. Available from: https://dx.doi.org/10.1016/j.plantsci.2022.111453.

DAS, NR., Krishnendu BERA, T. SHARMA, AP. TOROPOVA, AA. TOROPOV and PGR. ACHARY. Computational approach for building QSAR models for inhibition of HIF-1A. JOURNAL OF THE INDIAN CHEMICAL SOCIETY. INDIA: ELSEVIER, 2022, vol. 99, No 10, p. 100687-100695. ISSN 0019-4522. Available from: https://dx.doi.org/10.1016/j.jics.2022.100687.

POKORNÁ, Pavlína, Miroslav KREPL, Sébastien CAMPAGNE and Jiří ŠPONER. Conformational Heterogeneity of RNA Stem-Loop Hairpins Bound to FUS-RNA Recognition Motif with Disordered RGG Tail Revealed by Unbiased Molecular Dynamics Simulations. Journal of Physical Chemistry B. American Chemical Society, 2022, vol. 126, No 45, p. 9207-9221. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.2c06168.

SALVI, Nicola, Vojtěch ZAPLETAL, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Convergent views on disordered protein dynamics from NMR and computational approaches. BIOPHYSICAL JOURNAL. UNITED STATES: CELL PRESS, 2022, vol. 121, No 20, p. 3785-3794. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2022.09.016.

KASILIAUSKAITE, Aiste, Karel KUBÍČEK, Tomáš KLUMPLER, Martina ZÁNOVÁ, David ZAPLETAL, Eliska KOUTNA, Jiří NOVÁČEK and Richard ŠTEFL. Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly. Nucleic acids research. Oxford: Oxford University Press, 2022, vol. 50, No 10, p. 5961-5973. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac451.

CHARESHNEU, Aliaksei, David SEHNAL and Radka SVOBODOVÁ. CoverView: clear atom-level visualization of electron density coverage of PDB structures to assist validation. 2022.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Václav HEJRET and Michal ŠMÍDA. CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In Annual PhD conference Biomedical sciences, Brno. 2022.

BROM, Tomáš, Tomáš JANOVIČ, Pavel VEVERKA, Martin STOJASPAL and Ctirad HOFR. Critical interactions of neuronal transcription factor REST with stabilizer TRF2. 2022.

ZAPLETAL, David, Karel KUBÍČEK, Martina ZÁNOVÁ, Radek MALIK, Marek ŠEBESTA, Jiří NOVÁČEK, Petr SVOBODA and Richard ŠTEFL. Cryo-EM reveals the structural basis for the regulatory function of HEL1 domain in vertebrate DICERs. In Instruct Biennial Structural Biology ConferenceMuntgebouw, Utrecht, The Netherlands | 19-20 May, 2022. 2022.

NOVOTNÁ, Pavla, Václav BAČOVSKÝ, Bohuslav JANOUŠEK and Roman HOBZA. Cytogenetic studies on the sex chromosomes in Silene latifolia – historical insights and recent advances. In The Silene vortex : a model system for the study of evolution. 2022.

PERNISOVÁ, Markéta, Klára HOYEROVÁ, Jan HEJÁTKO and Ondřej NOVÁK. Cytokinin Forefront Research 2022. 2022.

DEB, Rahul, Ivo KABELKA, Jan PŘIBYL and Robert VÁCHA. De novo design of peptides that form transmembrane barrel pores killing antibiotic resistant bacteria. 2022.

BADIA-I-MOMPEL, P., JV. SANTIAGO, J. BRAUNGER, C. GEISS, D. DIMITROV, S. MÜLLER-DOTT, Petr TAUŠ, A. DUGOURD, Ch. HOLLAND, RR FLORES and J. SAEZ-RODRIGUEZ. decoupleR: Ensemble of computational methods to infer biological activities from omics data. Bioinformatics Advances. Spojené království: Oxford University Press, 2022, vol. 2, No 1, p. 1-3. ISSN 2635-0041. Available from: https://dx.doi.org/10.1093/bioadv/vbac016.

BARTONIČKA, Tomáš, Zdeněk BOCHNÍČEK, Vítězslav BRYJA, Petr BUREŠ, Magdalena BURGR, Martin CULEK, Miloš ČERNÍK, Martin ČERNOHORSKÝ, Dominik ČERNÝ, Martin ČUTA, Jiří DANIHELKA, Jiří DOŠKAŘ, Zuzana DOŠLÁ, Petr FIRBAS, Eduard FUCHS, Milan GELNAR, Jan GLOSER, Michal HÁJEK, Jan HELEŠIC, Ivan HOLOUBEK, Michal HORSÁK, Petr HROUDA, Dagmar CHYTKOVÁ, Magdaléna CHYTRÁ, Milan CHYTRÝ, Zuzana JAYASUNDERA, Jaroslav JONAS, Mikoláš JURDA, Josef KALAS, Tomáš KAŠPAROVSKÝ, Jana KLÁNOVÁ, Jaroslav KOČA, Alois KOZUBÍK, František KUBÍČEK, Radan KUČERA, Aleš LACINA, Kamil LÁSKA, Jaromír LEICHMANN, Zdeněk LOSOS, Přemysl LUBAL, Jaroslav MALINA, Petr MIKULÍK, Dominik MUNZAR, Rudolf MUSIL, Jana MUSILOVÁ, Marek NEČAS, Miroslav NĚMEC, Milan NOVÁK, Kateřina NOVÁKOVÁ, Stanislav PEKÁR, Milan POTÁČEK, Pavel PROŠEK, Antonín PŘICHYSTAL, Jiřina RELICHOVÁ, Jiří ROSICKÝ, Zdeněk ŘEHÁK, Ivo SEDLÁČEK, Jana SCHENKOVÁ, Jiří SCHLAGHAMERSKÝ, Eduard SCHMIDT, Pavlína SLAVÍKOVÁ, Jan SLOVÁK, Josef STANĚK, Kateřina ŠEBKOVÁ, Vladimír ŠIMEK, Roman ŠIMON HILSCHER, Pavel ŠIŠMA, Taťána ŠKARKOVÁ, Petr ŠPAČEK, Magdalena ŠPOKOVÁ, Vladimír ŠTEFL, Jan ŠVANCARA, Andrea ŠPALEK TÓTHOVÁ, Libuše TRNKOVÁ, David TRUNEC, Martin VÁCHA, Jaromír VAŇHARA, Monika VÍTĚZOVÁ, Michaela WIMMEROVÁ, Světlana ZAHRÁDKOVÁ, Petr ZBOŘIL and Josef ZEMAN. Dějiny psané přírodovědci : Vývoj vědních oborů na Přírodovědecké fakultě Masarykovy univerzity (History written by naturalists : Development of scientific disciplines at Masaryk University’s Faculty of Science). Online. Edited by Milan Gelnar - Z. Jayasundera. 1., elektronické vyd. Brno: Masarykova univerzita, 2022, 997 pp. ISBN 978-80-280-0089-9.

BARTONIČKA, Tomáš, Zdeněk BOCHNÍČEK, Vítězslav BRYJA, Petr BUREŠ, Magdalena BURGR, Martin CULEK, Miloš ČERNÍK, Martin ČERNOHORSKÝ, Dominik ČERNÝ, Martin ČUTA, Jiří DANIHELKA, Jiří DOŠKAŘ, Zuzana DOŠLÁ, Petr FIRBAS, Eduard FUCHS, Milan GELNAR, Jan GLOSER, Michal HÁJEK, Jan HELEŠIC, Ivan HOLOUBEK, Michal HORSÁK, Petr HROUDA, Dagmar CHYTKOVÁ, Magdaléna CHYTRÁ, Milan CHYTRÝ, Zuzana JAYASUNDERA, Jaroslav JONAS, Mikoláš JURDA, Josef KALAS, Tomáš KAŠPAROVSKÝ, Jana KLÁNOVÁ, Jaroslav KOČA, Alois KOZUBÍK, František KUBÍČEK, Radan KUČERA, Aleš LACINA, Kamil LÁSKA, Jaromír LEICHMANN, Zdeněk LOSOS, Přemysl LUBAL, Jaroslav MALINA, Petr MIKULÍK, Dominik MUNZAR, Rudolf MUSIL, Jana MUSILOVÁ, Marek NEČAS, Miroslav NĚMEC, Milan NOVÁK, Kateřina NOVÁKOVÁ, Stanislav PEKÁR, Milan POTÁČEK, Pavel PROŠEK, Antonín PŘICHYSTAL, Jiřina RELICHOVÁ, Jiří ROSICKÝ, Zdeněk ŘEHÁK, Ivo SEDLÁČEK, Jana SCHENKOVÁ, Jiří SCHLAGHAMERSKÝ, Eduard SCHMIDT, Pavlína SLAVÍKOVÁ, Jan SLOVÁK, Josef STANĚK, Kateřina ŠEBKOVÁ, Vladimír ŠIMEK, Roman ŠIMON HILSCHER, Pavel ŠIŠMA, Taťána ŠKARKOVÁ, Petr ŠPAČEK, Magdalena ŠPOKOVÁ, Vladimír ŠTEFL, Jan ŠVANCARA, Andrea ŠPALEK TÓTHOVÁ, Libuše TRNKOVÁ, David TRUNEC, Martin VÁCHA, Jaromír VAŇHARA, Monika VÍTĚZOVÁ, Michaela WIMMEROVÁ, Světlana ZAHRÁDKOVÁ, Petr ZBOŘIL and Josef ZEMAN. Dějiny psané přírodovědci : Vývoj vědních oborů na Přírodovědecké fakultě Masarykovy univerzity (History written by naturalists : Development of scientific disciplines at Masaryk University’s Faculty of Science). Edited by Milan Gelnar - Z. Jayasundera. 1st ed. Brno: Masarykova univerzita, 2022, 997 pp. ISBN 978-80-280-0088-2.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. Describing 14-3-3 dimerization: tools to obtain KD. In XXII. Workshop of Biophysical Chemists and Electrochemists. 2022. ISBN 978-80-280-0087-5.

FUJDIAROVÁ, Eva, Josef HOUSER, Filip MELICHER, Lukáš FALTINEK and Michaela WIMMEROVÁ. Detailed analysis of binding sites in the PLL family. 2022.

KOPČILOVÁ, Johana, Tereza KRAMÁŘOVÁ, Jana ZÍDKOVÁ, Kamila RÉBLOVÁ and Lenka FAJKUSOVÁ. Detekce rozsáhlých delecí a duplikací v genech spojených s neuromuskulárním onemocněním. (Detection of large deletions and duplications in genes associated with neuromuscular disease). In Celostátní sjezd Společnosti lékařské genetiky a genomiky ČLS JEP a 55. výroční cytogenetická konference, Praha. 2022.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylation changes in proteins and cells. In XXIst Meeting of Biochemists and Molecular Biologists. 2022. ISBN 978-80-280-0136-0.

JEŽKOVÁ, Petra, Jana SKŘIČKOVÁ, Gejza WIMMER, Jana ZELINKOVÁ, Zbyněk ZDRÁHAL and Erika LATTOVÁ. Differentiation of Sialyl Linkages Using a Combination of Alkyl Esterification and Phenylhydrazine Derivatization: Application for N-Glycan Profiling in the Sera of Patients with Lung Cancer. ANALYTICAL CHEMISTRY. UNITED STATES: AMER CHEMICAL SOC, 2022, vol. 94, No 18, p. 6736-6744. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.2c00105.

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NAVRKALOVÁ, Veronika, Jana KOTAŠKOVÁ, Karla PLEVOVÁ, Tomáš REIGL, Martina VALIŠOVÁ, Michaela BOHÚNOVÁ, Marcela ŽENATOVÁ, Lenka RADOVÁ, Anna PANOVSKÁ and Šárka POSPÍŠILOVÁ. Dynamics of genomic aberrations in relation to disease activity in untreated patients with chronic lymphocytic leukemia. In EHA 2022 in HemaSphere 2022; 6(S3): 998-999. 2022.

OLEKSIAK, Tadeusz, Ioannis SPYROGLOU, Darmara PACON, Przemysław MATYSIK, Markéta PERNISOVÁ and Krystyna RYBKA. Effect of drought on wheat production in Poland between 1961 and 2019. Crop Science. Madison: Crop Science Society of America, 2022, vol. 62, No 2, p. 728-743. ISSN 0011-183X. Available from: https://dx.doi.org/10.1002/csc2.20690.

SEBUYOYA, Ravery Jovinary, Ludmila MORÁŇOVÁ, Nasim IZADI, Lukáš MORÁŇ, Roman HRSTKA, Milan ANTON and Martin BARTOSIK. Electrochemical DNA biosensor coupled to LAMP reaction for early diagnostics of cervical precancerous lesions. Biosensors and Bioelectronics: X. Amsterdam: Elsevier, 2022, vol. 12, December 2022, p. 1-8. ISSN 2590-1370. Available from: https://dx.doi.org/10.1016/j.biosx.2022.100224.

MORÁŇOVÁ, Ludmila, Michal STANÍK, Roman HRSTKA, Susana CAMPUZANO and Martin BARTOŠÍK. Electrochemical LAMP-based assay for detection of RNA biomarkers in prostate cancer. Talanta. Elsevier, 2022, vol. 238, February, p. 123064-123071. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2021.123064.

KUČERA, Josef, Ondřej PEŠ, Tomáš JANOVIČ, Ctirad HOFR, Lenka KUBINYIOVÁ, Ján TÓTH, Štěpán KÁŇA and Petr TÁBORSKÝ. Enhancement of luminescence signal by deuterated water - Practical implications. Sensors and Actuators B: Chemical. Amsterdam: Elsevier B.V., 2022, vol. 352, No 1, p. 1-8. ISSN 0925-4005. Available from: https://dx.doi.org/10.1016/j.snb.2021.131029.

CHALUPOVÁ, Eliška, Ondřej VACULÍK, Jakub POLÁČEK, Filip JOZEFOV, Tomáš MAJTNER and Panagiotis ALEXIOU. ENNGene: an Easy Neural Network model building tool for Genomics. BMC Genomics. BioMed Central, 2022, vol. 23, No 1, p. 248-258. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-022-08414-x.

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TREBICHALSKÁ, Zuzana, Aygul ISHEMGULOVA, Liya MUKHAMEDOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. Enteroviruses reach cytoplasm by endosome disruption. In EUROPIC 2022. 2022.

BROM, Tomáš, Tomáš JANOVIČ, Martin STOJASPAL, Eliška KŮŘILOVÁ, Simona CHLUDILOVÁ and Ctirad HOFR. Essential transcription regulator Rta of Epstein-Barr virus - functional and structural implications for new antiviral strategy. In 1st MOSBRI Scientific Conference. 2022. Available from: https://dx.doi.org/.

BROM, Tomáš, Tomáš JANOVIČ, Martin STOJASPAL, Eliška KŮŘILOVÁ, Simona CHLUDILOVÁ and Ctirad HOFR. Essential transcription regulator Rta of Epstein-Barr virus - functional and structural implications for new antiviral strategy. In Instruct Biennial Structural Biology Conference. 2022.

HUBINSKÝ, Marcel, José Luís RODRÍGUEZ LORENZO, Daniel GACKOWSKI, Tomáš JANÍČEK and Roman HOBZA. Evidence of novel epigenetic marks within Silene latifolia genome. 2022.

MAU, Martin, Terezie MALÍK MANDÁKOVÁ, Xingliang MA, Jana EBERSBACH, Lifang ZOU, Martin LYSÁK and Timothy F SHARBEL. Evolution of an Apomixis-Specific Allele Class in Supernumerary Chromatin of Apomictic Boechera. Frontiers in Plant Science. Lausanne: FRONTIERS MEDIA SA, 2022, vol. 13, JUN, p. 890038-890054. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.890038.

KILAR, Agata Magdalena, Petr FAJKUS and Jiří FAJKUS. Evolution of plant telomerase RNAs: farther to the past, deeper to the roots. In Mendel Early Career Symposium. 2022.

ŠÁMALOVÁ, Markéta, Evelína GAHUROVÁ and Jan HEJÁTKO. Expansin-mediated developmental and adaptive responses: A matter of cell wall biomechanics? Quantitative Plant Biology. Cambridge University Press, 2022, vol. 3, June, p. 1-14. ISSN 2632-8828. Available from: https://dx.doi.org/10.1017/qpb.2022.6.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Kamila STRÁNSKÁ, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Marcela ŽENATOVÁ, Anna PANOVSKÁ, Michael DOUBEK, Jana KOTAŠKOVÁ, Šárka POSPÍŠILOVÁ and Karla PLEVOVÁ. Exploring clonal evolution in CLL: Analysis by whole exome sequencing. In 2nd Translational Research Conference Chronic Lymphocytic Leukaemia, E-conference. 2022.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Martina VALIŠOVÁ, Kamila RÉBLOVÁ, Terézia KURUCOVÁ, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ, Jana KOTAŠKOVÁ and Karla PLEVOVÁ. Exploring different aspects of clonal evolution in chronic lymphocytic leukemia. In Mendel Genetics Conference 2022. 2022.

ZÁVACKÁ, Kristýna, Petr TAUŠ, Karol PÁL, Jakub Paweł PORC, Šárka PAVLOVÁ, Jitka MALČÍKOVÁ, Kamila STRÁNSKÁ, Marcela ŽENATOVÁ, Martina VALIŠOVÁ, Kamila RÉBLOVÁ, Terézia KURUCOVÁ, Karolína ČERNOVSKÁ, Anna PANOVSKÁ, Michael DOUBEK, Šárka POSPÍŠILOVÁ, Jana KOTAŠKOVÁ and Karla PLEVOVÁ. Exploring different aspects of clonal evolution in chronic lymphocytic leukemia. In EMBO Workshop, Itálie, Rimini. 2022.

ZLÍNSKÁ, Vladimíra, Vaclav MATOUSEK, Lukáš TRANTÍREK and Riccardo RIGO. Fluorine Labeling as a Versatile Tool for Probing Nucleic Acid Folding and Interactions by NMR Spectroscopy. ALDRICHIMICA ACTA. UNITED STATES: ALDRICH CHEMICAL CO INC, 2022, vol. 55, No 2, p. 45-52. ISSN 0002-5100.

FERUS, Martin, Antonín KNÍŽEK, Lukáš PETERA, Adam PASTOREK, Jana HRNČÍŘOVÁ, Luboš JANKOVIČ, Ondřej IVANEK, Jiří ŠPONER, Anna KŘIVKOVÁ, Homa SAEIDFIROZEH, Svatopluk CIVIŠ, Elias CHATZITHEODORIDIS, Klaudia MRÁZIKOVÁ, Lukáš NEJDL, Franz SAIJA, Judit E. ŠPONER and Giuseppe CASSONE. Formamide-Based Post-impact Thermal Prebiotic Synthesis in Simulated Craters: Intermediates, Products and Mechanism. Frontiers in Astronomy and Space Sciences. Frontiers Media SA, 2022, vol. 9, May, p. 1-11. ISSN 2296-987X. Available from: https://dx.doi.org/10.3389/fspas.2022.882145.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. From nano- to milimolar: dimerization dissociation constant determination. In Chemistry towards Biology (CTB10). 2022. ISBN 978-80-971665-3-3.

FROHLICH, Jan, Kristina KOVACOVICOVA, Marco RAFFAELE, Tereza VIRGLOVA, Eliska CIZKOVA, Jan KUČERA, Julie DOBROVOLNÁ, Martin WABITSCH, Marion PEYROU, Francesca BONOMINI, Rita REZZANI, George N. CHALDAKOV, Anton B. TONCHEV, Michelino DI ROSA, Nicolas BLAVET, Václav HEJRET and Manlio VINCIGUERRA. GDF11 inhibits adipogenesis and improves mature adipocytes metabolic function via WNT/beta-catenin and ALK5/SMAD2/3 pathways. Cell Proliferation. 2022, vol. 55, No 10, p. 1-15. ISSN 0960-7722. Available from: https://dx.doi.org/10.1111/cpr.13310.

OLSEN, Luka N, Marie K BRANDRUD, Terezie MALÍK MANDÁKOVÁ, Martin LYSÁK, Charlotte S BJORA, Eduardo CIRES, Inger NORDAL and Anne K BRYSTING. Genetic structure and evolution of diploid Cochlearia in Iceland. Botanical Journal of the Linnean society. OXFORD: The Linnean Society of London, 2022, vol. 200, No 3, p. 395-415. ISSN 0024-4074. Available from: https://dx.doi.org/10.1093/botlinnean/boac018.

ZUO, Sheng, Xinyi GUO, Terezie MALÍK MANDÁKOVÁ, Mark EDGINTON, Ihsan A AL-SHEHBAZ and Martin LYSÁK. Genome diploidization associates with cladogenesis, trait disparity, and plastid gene evolution. PLANT PHYSIOLOGY. UNITED STATES: OXFORD UNIV PRESS INC, 2022, vol. 190, No 1, p. 403-420. ISSN 0032-0889. Available from: https://dx.doi.org/10.1093/plphys/kiac268.

SALAVA, Hymavathi, Sravankumar THULA, Adria SANS SÁNCHEZ, Tomasz NODZYNSKI and Fatemeh MAGHULY. Genome Wide Identification and Annotation of NGATHA Transcription Factor Family in Crop Plants. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2022, vol. 23, No 13, p. 7063-7084. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms23137063.

ZUO, Sheng, Terezie MALÍK MANDÁKOVÁ, Michaela KUBOVÁ and Martin LYSÁK. Genomes, repeatomes and interphase chromosome organization in the meadowfoam family (Limnanthaceae, Brassicales). PLANT JOURNAL. ENGLAND: WILEY, 2022, vol. 110, No 5, p. 1462-1475. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15750.

LODHI, Yusuf, Adriana LADUNGOVÁ, Daniel BUŠA, Helena PESCHELOVÁ, Martin ČULEN and Michal ŠMÍDA. Genome-wide Screening Optimizations and High-throughput Compound Screening to Identify Novel Treatment Options in Venetoclax-resistant AML. In Annual PhD conference Biomedical sciences, Brno. 2022.

GREŠOVÁ, Katarína, Petr ŠIMEČEK, Vlastimil MARTINEK, David ČECHÁK and Panagiotis ALEXIOU. Genomic Benchmarks: A Collection of Datasets for Genomic Sequence Classification. 2022. ISBN 978-80-7592-127-7.

POSPÍŠIL, Jakub, Milos HRABOVSKY, Dáša BOHAČIAKOVÁ, Zuzana HOVADKOVA, Miroslav JURÁSEK, Jarmila MLČOUŠKOVÁ, Kamil PARUCH, Šárka NEVOLOVÁ, Jiří DAMBORSKÝ, Aleš HAMPL and Josef JAROŠ. Geometric Control of Cell Behavior by Biomolecule Nanodistribution. ACS BIOMATERIALS SCIENCE & ENGINEERING. WASHINGTON: AMER CHEMICAL SOC, 2022, vol. 8, No 11, p. 4789-4806. ISSN 2373-9878. Available from: https://dx.doi.org/10.1021/acsbiomaterials.2c00650.

DOSEDĚLOVÁ, Věra and Petr KUBÁŇ. Gold nanoparticles – from synthesis to extraction of biological thiols and CE-LIF analysis. In APCE-CECE ITP-IUPAC 2022. 2022.

HEJÁTKO, Jan, Jiří FAJKUS, Zbyněk ZDRÁHAL, Natallia MADZIA VALASEVICH, Helene ROBERT BOISIVON and František FORET. Green Biotech Workshop 2022. 2022.

HOLOUBEK, Jiří, Klára BEDNÁŘOVÁ, Jan HAVIERNIK, Ivana HUVAROVÁ, Zuzana DVOŘÁKOVÁ, Jiří ČERNÝ, Martina OUTLÁ, Jiří SALÁT, Eva KONKOLOVA, Evzen BOURA, Daniel RŮŽEK, Michaela VORLÍČKOVÁ, Luděk EYER and Daniel RENČIUK. Guanine quadruplexes in the RNA genome of the tick-borne encephalitis virus: their role as a new antiviral target and in virus biology. Nucleic Acids Research. Oxford University Press, 2022, vol. 50, No 8, p. 4574-4600. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac225.

JEDLIČKOVÁ, Veronika, Kateřina MÁCOVÁ, Marie ŠTEFKOVÁ, Jan BUTULA, Jana ZEMÁNKOVÁ, Marek SEDLÁČEK and Helene ROBERT BOISIVON. Hairy root transformation system as a tool for CRISPR/Cas9-directed genome editing in oilseed rape (Brassica napus). FRONTIERS IN PLANT SCIENCE. SWITZERLAND: FRONTIERS MEDIA SA, 2022, vol. 13, August, p. 1-15. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.919290.

AL-SHEHBAZ, Ihsan A, Terezie MALÍK MANDÁKOVÁ, Klaus MUMMENHOFF and Martin LYSÁK. Heliophila verna (Brassicaceae), a new species from the Northern Cape of South Africa. Phytotaxa. ST LUKES, NEW ZEALAND: MAGNOLIA PRESS, 2022, vol. 555, No 2, p. 195-199. ISSN 1179-3155. Available from: https://dx.doi.org/10.11646/phytotaxa.555.2.8.

LEXA, Matej, Monika ČECHOVÁ, Son Hoang NGUYEN, Pavel JEDLIČKA, Viktor TOKAN, Zdeněk KUBÁT, Roman HOBZA and Eduard KEJNOVSKÝ. HiC-TE: a computational pipeline for Hi-C data analysis to study the role of repeat family interactions in the genome 3D organization. BIOINFORMATICS. ENGLAND: OXFORD UNIV PRESS, 2022, vol. 38, No 16, p. 4030-4032. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btac442.

SPYROGLOU, Ioannis, Krystyna RYBKA, Paweł CZEMBOR, Dominika PIASKOWSKA, Markéta PERNISOVÁ and Przemysław MATYSIK. Higher alterations in leaf fluorescence parameters of wheat cultivars predict more extensive necrosis in response to Zymoseptoria tritici. PLANT PATHOLOGY. ENGLAND: WILEY, 2022, vol. 71, No 6, p. 1454-1466. ISSN 0032-0862. Available from: https://dx.doi.org/10.1111/ppa.13569.

LARDON, Robin, Hoang Khai TRINH, Xiangyu XU, Lam Dai VU, Brigitte VAN DE COTTE, Markéta PERNISOVÁ, Steffen VANNESTE, Ive DE SMET and Danny GEELEN. Histidine kinase inhibitors impair shoot regeneration in Arabidopsis thaliana via cytokinin signaling and SAM patterning determinants. Frontiers in Plant Science. Frontiers Media S.A., 2022, vol. 13, September, p. 1-22. ISSN 1664-462X. Available from: https://dx.doi.org/10.3389/fpls.2022.894208.

GIALLONGO, Sebastiano, Daniela REHAKOVA, Tommaso BIAGINI, Oriana LO RE, Priyanka RAINA, Gabriela LOCHMANOVÁ, Zbyněk ZDRÁHAL, Igor RESNICK, Pille PATA, Illar PATA, Martin MISTRIK, Joao Pedro DE MAGALHAES, Tommaso MAZZA, Irena KOUTNÁ and Manlio VINCIGUERRA. Histone Variant macroH2A1.1 Enhances Nonhomologous End Joining-dependent DNA Double-strand-break Repair and Reprogramming Efficiency of Human iPSCs. Stem Cells. OXFORD: OXFORD UNIV PRESS, 2022, vol. 40, No 1, p. 35-48. ISSN 1066-5099. Available from: https://dx.doi.org/10.1093/stmcls/sxab004.

CAVALLIN, Ivana, Marek BARTOŠOVIČ, Tomáš SKALICKÝ, Praveenkumar RENGARAJ, Martin DEMKO, Martina Christina SCHMIDT-DENGLER, Aleksej DRINO, Mark HELM and Štěpánka VAŇÁČOVÁ. HITS-CLIP analysis of human ALKBH8 reveals interactions with fully processed substrate tRNAs and with specific noncoding RNAs. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 12, p. 1568-1581. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079421.122.

KASHKAN, Ivan, Kseniya TIMOFEYENKO and Kamil RŮŽIČKA. How alternative splicing changes the properties of plant proteins. Quantitative Plant Biology. Cambridge University Press, 2022, vol. 3, July 2022, p. 1-11. ISSN 2632-8828. Available from: https://dx.doi.org/10.1017/qpb.2022.9.

SUKENÍK, Lukáš, Rahul DEB and Robert VÁCHA. HOW LARGE MOLECULES CAN ENTER CELL. In Czech Chemical Society Symposium Series - Annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2022. ISSN 2336-7202.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Hunting Strategy and Virion structure of Bacteriophage JBD30 Revealed by Cryo-electron Microscopy. In CEITEC PhD Conference 2022. 2022.

PIKULOVÁ, Petra, Pia Yasmine JURČEK, Jan CHYBA, Michal KNOR, Anna HRUZÍKOVÁ, Jan NOVOTNÝ and Radek MAREK. Hyperfine chemical shift in host-guest systems of Ru(III) with macrocycles. In EUROMAR 2022. 2022.

BENEŠOVÁ, Iva, Adam Paulin URMINSKÝ, Jana HALÁMKOVÁ and Lenka HERNYCHOVÁ. Changes of serum protein N-glycosylation in cancer. Časopis Klinická onkologie. Praha: Česká lékařská společnost J. E. Purkyně, 2022, vol. 35, No 3, p. 174-180. ISSN 0862-495X. Available from: https://dx.doi.org/10.48095/ccko2022174.

RIEVAJOVÁ, Martina, Lenka MALINOVSKÁ, Hana BEREZŇÁKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Characterization of a novel lectin from pathogenic fungus Microsporum canis. In 29. kongres Československé společnosti mikrobiologické s mezinárodní účastí. 2022. ISBN 978-80-88379-18-8.

POKORNÁ, Pavlína. Characterization of structural ensembles at dynamic RNA-protein interfaces with molecular dynamics simulations – study of FUS RRM-RGG binding to RNA hair- pins. In RNA 2022. 2022.

BOUCHALOVÁ, Pavla, Lucia SOMMEROVÁ, David POTĚŠIL, Andrea MARTIŠOVÁ, Petr LAPČÍK, Veronika BRYCHTOVÁ, Alexander SCHERL, Petr VOŇKA, Joan PLANAS IGLESIAS, Eric CHEVET, Pavel BOUCHAL and Roman HRSTKA. Characterization of the AGR2 Interactome Uncovers New Players of Protein Disulfide Isomerase Network in Cancer Cells. Molecular & Cellular Proteomics. American Society for Biochemistry and Molecular Biology, 2022, vol. 21, No 2, p. 1-19. ISSN 1535-9484. Available from: https://dx.doi.org/10.1016/j.mcpro.2021.100188.

JEMELKOVÁ, Jitka, Edit LELKES, Marcela HOLÁ, Barbora ŠTEFANOVIE, Peter KOLESÁR, Karel J. ANGELIS and Jan PALEČEK. Characterization of the NSE6 subunit of the Physcomitrium patens SMC5/6 complex. 2022.

COLVILLE, Carly, Alper James ALCARAZ, Derek GREEN, Bradley PARK, Jianguo XIA, Othman SOUFAN, Pavel HRUŠKA, David POTĚŠIL, Zbyněk ZDRÁHAL, Doug CRUMP, Niladri BASU, Natacha HOGAN and Markus HECKER. Characterizing toxicity pathways of fluoxetine to predict adverse outcomes in adult fathead minnows (Pimephales promelas). SCIENCE OF THE TOTAL ENVIRONMENT. NETHERLANDS: ELSEVIER, 2022, vol. 817, APR, p. "152747", 10 pp. ISSN 0048-9697. Available from: https://dx.doi.org/10.1016/j.scitotenv.2021.152747.

GOTTUMUKKALA, Narendra Varma, Veronika MANČÍKOVÁ, Aneta LEDEREROVÁ, Veronika KOZLOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI, Jan VERNER and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity by preventing CD19 antigen escape in relapsed models. In XVII. Myeloma and Cell Therapy Workshop, Ostrava. 2022.

GOTTUMUKKALA, Narendra Varma, Veronika MANČÍKOVÁ, Aneta LEDEREROVÁ, Veronika KOZLOVÁ, Lenka DOSTÁLOVÁ, Adriana LADUNGOVÁ, Yusuf LODHI, Jan VERNER and Michal ŠMÍDA. Chasing the epigenetic landscape to enhance CAR-T cell activity by preventing CD19 antigen escape in relapsed models. In Annual PhD conference Biomedical sciences, Brno. 2022.

BROCK, Jordan R., Terezie MALÍK MANDÁKOVÁ, Michael MCKAIN, Martin LYSÁK and Kenneth M. OLSEN. Chloroplast phylogenomics in Camelina (Brassicaceae) reveals multiple origins of polyploid species and the maternal lineage of C. sativa. Horticulture Research. Oxford University Press, 2022, vol. 9, January, p. 1-13. ISSN 2662-6810. Available from: https://dx.doi.org/10.1093/hr/uhab050.

STEFANOVIE, B, T CLARENCE, Lenka JURČIŠINOVÁ, Jakub Paweł PORC, Karla PLEVOVÁ and Jan PALEČEK. Chromatin organization by the SMC5/6 complex. In SYMPOSIUM & ANNUAL MC MEETING Nuclear Architecture & Function in Toulouse. 2022.

ŠMAK, Pavel, Jana GREGOROVÁ, Lenka KUBINYIOVÁ, Jan ŠTINGL and Ondřej PEŠ. Chromatographic modeling as a tool in optimizing reversed-phase separation methods. In 23. Ročník školy hmotnostní spektrometrie. 2022. ISBN 978-80-88195-25-2.

DOGAN, Mert, Terezie MALÍK MANDÁKOVÁ, Xinyi GUO and Martin LYSÁK. Idahoa and Subularia: Hidden polyploid origins of two enigmatic genera of crucifers. American Journal of Botany. St Louis: Botanical Soc Amer Inc, 2022, vol. 109, No 8, p. 1273-1289. ISSN 0002-9122. Available from: https://dx.doi.org/10.1002/ajb2.16042.

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