Publication Records

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ and Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae453.

MRÁČKOVÁ, Martina, Radek MAREČEK, Jiří MEKYSKA, Milena KOŠŤÁLOVÁ and Irena REKTOROVÁ. Levodopa may modulate specific speech impairment in Parkinson's disease: an fMRI study. Journal of Neural Transmission. Vienna: SPRINGER, 2024, vol. 131, No 2, p. 181-187. ISSN 0300-9564. Available from: https://dx.doi.org/10.1007/s00702-023-02715-5.

LINHARTOVÁ, Kateřina, Francesco Luca FALGINELLA, Martin MÁTL, Marek ŠEBESTA, Robert VÁCHA and Richard ŠTEFL. Sequence and structural determinants of RNAPII CTD phase-separation and phosphorylation by CDK7. Nature Communications. Berlin: Nature Research, 2024, vol. 15, No 1, p. 1-17. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-024-53305-2.

KEOWN, Jeremy, Alaa BAAZAOUI, Marek ŠEBESTA, Richard ŠTEFL, Loic CARRIQUE, Ervin FODOR and Jonathan M GRIMES. Structural and functional characterization of the interaction between the influenza A virus RNA polymerase and the CTD of host RNA polymerase II. Journal of Virology. WASHINGTON: American Society for Microbiology, 2024, vol. 98, No 5, p. 1-15. ISSN 0022-538X. Available from: https://dx.doi.org/10.1128/jvi.00138-24.

ZAPLETAL, David, Karel KUBÍČEK, Petr SVOBODA and Richard ŠTEFL. Dicer structure and function: conserved and evolving features. EMBO reports. Wiley, 2023, vol. 24, No 7, p. 1-13. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.202357215.

HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL and Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2818-2837. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad092.

PAPAGEORGIOU, Anna, Michaela POSPÍŠILOVÁ, Jakub CIBULKA, Raghib ASHRAF, Christopher WAUDBY, Pavel KADEŘÁVEK, Volha MAROZ, Karel KUBÍČEK, Zbyněk PROKOP, Lumír KREJČÍ and Konstantinos TRIPSIANES. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase. Nature Communications. Berlin: Nature, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-42503-z.

ZÁVODNÍK, Michal, Petr FAJKUS, Michal FRANEK, David KOPECKÝ, Sonia GARCIA, Steven DODSWORTH, Andres OREJUELA, Agata Magdalena KILAR, Jiri PTACEK, Martin MÁTL, Anna HÝSKOVÁ, Jiří FAJKUS and Vratislav PEŠKA. Telomerase RNA gene paralogs in plants - the usual pathway to unusual telomeres. New Phytologist. HOBOKEN: Blackwell Science, 2023, vol. 239, No 6, p. 2353-2366. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19110.

LONG, Qilin, Marek ŠEBESTA, Kateřina ŠEDOVÁ, Vojtěch HALUZA, Adele ALAGIA, Zhichao LIU, Richard ŠTEFL and Monika GULLEROVA. The phosphorylated trimeric SOSS1 complex and RNA polymerase II trigger liquid-liquid phase separation at double-strand breaks. Cell Reports. Elsevier, 2023, vol. 42, No 12, p. 1-25. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.113489.

KELLNER, Max J, James J ROSS, Jakob SCHNABL, Marcus P S DEKENS, Martin MÁTL, Robert HEINEN, Irina GRISHKOVSKAYA, Benedikt BAUER, Johannes STADLMANN, Luis MENENDEZ-ARIAS, Andrew D STRAW, Robert FRITSCHE-POLANZ, Marianna TRAUGOTT, Tamara SEITZ, Alexander ZOUFALY, Manuela FOEDINGER, Christoph WENISCH, Johannes ZUBER, Andrea PAULI and Julius BRENNECKE. A Rapid, Highly Sensitive and Open-Access SARS-CoV-2 Detection Assay for Laboratory and Home Testing. Frontiers in Molecular Biosciences. Lausanne: Frontiers Media SA, 2022, vol. 9. ISSN 2296-889X. Available from: https://dx.doi.org/10.3389/fmolb.2022.801309.

KASILIAUSKAITE, Aiste, Karel KUBÍČEK, Tomáš KLUMPLER, Martina ZÁNOVÁ, David ZAPLETAL, Eliska KOUTNA, Jiří NOVÁČEK and Richard ŠTEFL. Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly. Nucleic acids research. Oxford: Oxford University Press, 2022, vol. 50, No 10, p. 5961-5973. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkac451.

ZAPLETAL, David, Karel KUBÍČEK, Martina ZÁNOVÁ, Radek MALIK, Marek ŠEBESTA, Jiří NOVÁČEK, Petr SVOBODA and Richard ŠTEFL. Cryo-EM reveals the structural basis for the regulatory function of HEL1 domain in vertebrate DICERs. In Instruct Biennial Structural Biology ConferenceMuntgebouw, Utrecht, The Netherlands | 19-20 May, 2022. 2022.

ZAPLETAL, David, Eliska TABORSKA, Josef PASULKA, Radek MALIK, Karel KUBÍČEK, Martina ZÁNOVÁ, Christian MUCH, Marek ŠEBESTA, Valeria BUCCHERI, Filip HORVAT, Irena JENICKOVA, Michaela PROCHAZKOVA, Jan PROCHAZKA, Matyáš PINKAS, Jiří NOVÁČEK, Diego F JOSEPH, Radislav SEDLACEK, Carrie BERNECKY, Donal CARROLL, Richard ŠTEFL and Petr SVOBODA. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. CAMBRIDGE: CELL PRESS, 2022, vol. 82, No 21, p. 4064-4079, 30 pp. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2022.10.010.

APPEL, Lisa-Marie, Vedran FRANKE, Melania BRUNO, Irina GRISHKOVSKAYA, Aiste KASILIAUSKAITE, Tanja KAUFMANN, Ursula E. SCHOEBERL, Martin G. PUCHINGER, Sebastian KOSTRHON, Carmen EBENWALDNER, Marek ŠEBESTA, Etienne BELTZUNG, Karl MECHTLER, Gen LIN, Anna VLASOVA, Martin LEEB, Rushad PAVRI, Alexander STARK, Altuna AKALIN, Richard ŠTEFL, Carrie BERNECKY, Kristina DJINOVIC-CARUGO and Dea SLADE. PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC. Nature Communications. London: Nature Publishing Group, 2021, vol. 12, No 1, p. 6078-6101. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-021-26360-2.

KASILIAUSKAITE, Aiste, Richard ŠTEFL, Tomáš KLUMPLER and Jiří NOVÁČEK. A Structural Basis for the Cross-Talk Between Histones and RNA Polymerase II. In CEITEC PhD Conference. 2020.

WIMMEROVÁ, Michaela, Monika KUBÍČKOVÁ and Jiří NOVÁČEK. Instruct-ERIC and ARBRE-MOBIEU Workshop: Analysis and Optimization of Sample Quality for Cryo-electron Microscopy and Other Structural Techniques. 2020.

LINHARTOVÁ, Kateřina, Jakub MACOŠEK, Veronika JANŠTOVÁ, Eliška ŠMIŘÁKOVÁ, Karel KUBÍČEK and Richard ŠTEFL. Recognition of RNA Polymerase II C-terminal domain by RPRD2. In CEITEC PhD Conference. 2020.

KLÁPŠŤOVÁ, Veronika, Marek ŠEBESTA, Jiří NOVÁČEK and Richard ŠTEFL. Structural Characterization of the Interaction Between BRCA1-BARD1 and RNA Polymerase II. In CEITEC PhD Conference. 2020.

HAN, Z., Olga JASNOVIDOVA, N. HAIDARA, A. TUDEK, Karel KUBÍČEK, D. LIBRI, Richard ŠTEFL and O. PORRUA. Termination of non-coding transcription in yeast relies on both an RNA Pol II CTD interaction domain and a CTD-mimicking region in Sen1. EMBO Journal. Hoboken (USA): WILEY-BLACKWELL, 2020, vol. 39, No 7, p. 101548-101569. ISSN 0261-4189. Available from: https://dx.doi.org/10.15252/embj.2019101548.

BRÁZDA, Pavel, Magdaléna KREJČÍKOVÁ, Aiste KASILIAUSKAITE, Eliška ŠMIŘÁKOVÁ, Tomáš KLUMPLER, Robert VÁCHA, Karel KUBÍČEK and Richard ŠTEFL. Yeast Spt6 Reads Multiple Phosphorylation Patterns of RNA Polymerase II C-Terminal Domain In Vitro. Journal of Molecular Biology. Academic Press, 2020, vol. 432, No 14, p. 4092-4107. ISSN 0022-2836. Available from: https://dx.doi.org/10.1016/j.jmb.2020.05.007.

SEITZ, K., K. BUCZOLICH, Alžbeta DIKUNOVÁ, Pavel PLEVKA, K. POWER, T. RIIMENAPF and B. LAMP. A molecular clone of Chronic Bee Paralysis Virus (CBPV) causes mortality in honey bee pupae (Apis mellifera). Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, NOV, p. 16274-16284. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-52822-1.

KASARI, V., A.A. POCHOPIEN, T. MARGUS, V. MURINA, K. TURNBULL, Y. ZHOU, T. NISSAN, M. GRAF, Jiří NOVÁČEK, G.C. ATKINSON, M.J.O. JOHANSSON, D.N. WILSON and V. HAURYLIUK. A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling. Nucleic acids research. Oxford: Oxford University Press, 2019, vol. 47, No 16, p. 8807-8820. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz600.

NOVÁČEK, Jiří. Days of Electron Microscopy 2019. 2019.

BERTOLLA, L., I. DLOUHY, E. BARTONICKOVA, Jaromír TOUŠEK, Jiří NOVÁČEK and P. MACOVA. Deconstruction of microfibrillated cellulose into nanocrystalline cellulose rods and mesogenic phase formation in concentrated low-modulus sodium silicate solutions. Cellulose. DORDRECHT: SPRINGER, 2019, vol. 26, No 7, p. 4325-4344. ISSN 0969-0239. Available from: https://dx.doi.org/10.1007/s10570-019-02364-6.

BRÁZDA, Pavel, Ondrej ŠEDO, Karel KUBÍČEK and Richard ŠTEFL. Efficient and robust preparation of tyrosine phosphorylated intrinsically disordered proteins. BioTechniques. UNITED HOUSE, 2 ALBERT PL, LONDON N3 1QB: FUTURE SCI LTD, 2019, vol. 67, No 1, p. 16-22. ISSN 0736-6205. Available from: https://dx.doi.org/10.2144/btn-2019-0033.

AXMANN, M., E. SEZGIN, A. KARNER, Jiří NOVÁČEK, M.D. BRODESSER, C. ROHRL, J. PREINER, H. STANGL and B. PLOCHBERGER. Receptor-Independent Transfer of Low Density Lipoprotein Cargo to Biomembranes. NANO LETTERS. WASHINGTON: AMER CHEMICAL SOC, 2019, vol. 19, No 4, p. 2562-2567. ISSN 1530-6984. Available from: https://dx.doi.org/10.1021/acs.nanolett.9b00319.

KEZAR, A., L. KAVCIC, Martin POLÁK, Jiří NOVÁČEK, I. GUTIERREZ-AGUIRRE, M.T. ZNIDARIC, A. CO, K. STARE, K. GRUDEN, M. RAVNIKAR, D. PAHOVNIK, E. ZAGAR, F. MERZEL, G. ANDERLUH and M. PODOBNIK. Structural basis for the multitasking nature of the potato virus Y coat protein. Science advances. New York: American Association for the Advancement of Science, 2019, vol. 5, No 7, p. 1-13. ISSN 2375-2548. Available from: https://dx.doi.org/10.1126/sciadv.aaw3808.

BŘENKOVÁ, Barbora, Marta ŠIBOROVÁ, Jiří NOVÁČEK, Pavol BÁRDY, Roman PANTŮČEK and Pavel PLEVKA. Structure of a staphylococcal phage connector protein. In XVI. Discussions in Structural Molecular Biology. 2019.

HEMZAL, Dušan, Yu Ri KANG, Jan DVOŘÁK, Tomasz KABZINSKI, Karel KUBÍČEK, Kim YOUNG DONG and Josef HUMLÍČEK. Treatment of Surface Plasmon Resonance (SPR) Background in Total Internal Reflection Ellipsometry: Characterization of RNA Polymerase II Film Formation. APPLIED SPECTROSCOPY. Thousand Oaks: SAGE PUBLICATIONS INC, 2019, vol. 73, No 3, p. 261-270. ISSN 0003-7028. Available from: https://dx.doi.org/10.1177/0003702819826280.

EVANGELIDIS, Thomas, S. NERLI, Jiří NOVÁČEK, A.E. BRERETON, P.A. KARPLUS, R.R. DOTAS, V. VENDITTI, N.G. SGOURAKIS and Konstantinos TRIPSIANES. Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra. Nature Communications. London: Nature Publishing Group, 2018, vol. 9, JAN, p. 384-396. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-017-02592-z.

KLUMPLER, Tomáš. BioSAXS practical course 2018. 2018.

NOVÁČEK, Jiří. Dny elektronové mikroskopie (prohlídka CF Cryo-EM) (Days of Electron Microscopy (CF Cryo-EM)). 2018.

MELKOVÁ, Kateřina, Vojtěch ZAPLETAL, Séverine JANSEN, Erik NOMILNER, Milan ZACHRDLA, Jozef HRITZ, Jiří NOVÁČEK, M. ZWECKSTETTER, M.R. JENSEN, M. BLACKLEDGE and Lukáš ŽÍDEK. Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2018, vol. 293, No 34, p. 13297-13309. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.RA118.001769.

ŠPÍREK, Mário, Jarmila MLČOUŠKOVÁ, Ondrej BELÁŇ, Máté GYIMESI, Gábor M. HARAMI, Eszter MOLNÁR, Jiří NOVÁČEK, Mihály KOVÁCS and Lumír KREJČÍ. Human RAD51 rapidly forms intrinsically dynamic nucleoprotein filaments modulated by nucleotide binding state. Nucleic Acids Research. Oxford: Oxford University Press, 2018, vol. 46, No 8, p. 3967-3980. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gky111.

CLARK, S., J.B. MYERS, A. KING, Radovan FIALA, Jiří NOVÁČEK, G. PEARCE, J. HEIERHORST, S.L. REICHOW and E.J. BARBAR. Multivalency regulates activity in an intrinsically disordered transcription factor. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, vol. 7, MAY, p. 1-28. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.36258.

NOVÁČEK, Jiří. Practical Workshop on Cryo-electron Microscopy Data Analysis in Scipion. 2018.

BENEŠÍK, Martin, Jiří NOVÁČEK, Lubomír JANDA, Radka DOPITOVÁ, Markéta PERNISOVÁ, Kateřina MELKOVÁ, Lenka TISAKOVA, Jiří DOŠKAŘ, Lukáš ŽÍDEK, Jan HEJÁTKO and Roman PANTŮČEK. Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. Virus Genes. DORDRECHT: Springer US, 2018, vol. 54, No 1, p. 130-139. ISSN 0920-8569. Available from: https://dx.doi.org/10.1007/s11262-017-1507-2.

CROWE-MCAULIFFE, C., M. GRAF, P. HUTER, H. TAKADA, M. ABDELSHAHID, Jiří NOVÁČEK, V. MURINA, G.C. ATKINSON, V. HAURYLIUK and D.N. WILSON. Structural basis for antibiotic resistance mediated by the Bacillus subtilis ABCF ATPase VmlR. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2018, vol. 115, No 36, p. 8978-8983. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1808535115.

NOVÁČEK, Jiří. Symposium on recent advances in cryo-electron microscopy. 2018.

SICORELLO, A., G. KELLY, A. OREGIONI, Jiří NOVÁČEK, Vladimír SKLENÁŘ and A. PASTORE. The Structural Properties in Solution of the Intrinsically Mixed Folded Protein Ataxin-3. Biophysical Journal. Bethesda, USA: Biophysical Society, 2018, vol. 115, No 1, p. 59-71. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2018.05.029.

SHEMESH, Keren, Marek ŠEBESTA, Martin PAČESA, Soumitra SAU, Alex BRONSTEIN, Oren PARNAS, Batia LIEFSHITZ, Česlovas VENCLOVAS, Lumír KREJČÍ and Martin KUPIEC. A structure-function analysis of the yeast Elg1 protein reveals the importance of PCNA unloading in genome stability maintenance. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 6, p. 3189-3203. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkw1348.

NEČASOVÁ, Ivona, Eliška JANOUŠKOVÁ, Tomáš KLUMPLER and Ctirad HOFR. Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it. Nucleic Acids Research. 2017, vol. 45, No 21, p. 12170-12180. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkx812.

NEČASOVÁ, Ivona, Eliška JANOUŠKOVÁ, Tomáš KLUMPLER and Ctirad HOFR. Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it (gkx812) (vol 45, pg 12170, 2017). Oxford: Oxford University Press, 2017. Available from: https://dx.doi.org/10.1093/nar/gkx968.

OTRUSINOVÁ, Olga, Gabriel DEMO, Petr PADRTA, Zuzana JASEŇÁKOVÁ, Blanka PEKÁROVÁ, Zuzana GELOVÁ, Agnieszka SZMITKOWSKA, Pavel KADEŘÁVEK, Séverine JANSEN, Milan ZACHRDLA, Tomáš KLUMPLER, Jaromír MAREK, Jozef HRITZ, Lubomír JANDA, Hideo IWAI, Michaela WIMMEROVÁ, Jan HEJÁTKO and Lukáš ŽÍDEK. Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2017, vol. 292, No 42, p. 17525-17540. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.M117.790212.

HALOUZKA, Vladimír, Barbora Agatha HALOUZKOVÁ, David JIROVSKY, Dušan HEMZAL, Petr ONDRA, Eirini SIRANIDI, Athanassios G KONTOS, Polycarpos FALARAS and Jan HRBÁČ. Copper nanowire coated carbon fibers as efficient substrates for detecting designer drugs using SERS. Talanta. AMSTERDAM: Elsevier, 2017, vol. 165, APRIL, p. 384-390. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2016.12.084.

TRISTAO RAMOS, Ravi José, Allan Cézar DE AZEVEDO MARTINS, Gabrielle DA SILVA DELGADO, Crina-Maria IONESCU, Peter Turán ÜRMÉNYI, Rosane SILVA and Jaroslav KOČA. CrocoBLAST: Running BLAST efficiently in the age of next-generation sequencing. Bioinformatics. Oxford: Oxford University Press, 2017, vol. 33, No 22, p. 3648-3651. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btx465.

GRAF, M., S. ARENZ, P. HUTER, A. DONHOFER, Jiří NOVÁČEK and D.N. WILSON. Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 5, p. 2887-2896. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkw1272.

RŮŽIČKA, Michal, Petr KULHÁNEK, Lenka RADOVÁ, Andrea ČECHOVÁ, Naděžda ŠPAČKOVÁ, Lenka FAJKUSOVÁ and Kamila RÉBLOVÁ. DNA mutation motifs in the genes associated with inherited diseases. Plos one. San Francisco: Public Library of Science, 2017, vol. 12, No 8, p. nestránkováno, 16 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0182377.

HRBÁČ, Jan, Jan ROZSYPAL, Daniel RIMAN, Vladimír HALOUZKA, Dušan HEMZAL and Vít PAVELKA. Electrochemical and electrophoretic deposition of materials obtained by anodic dissolution of metals in water. Online. In Libuše Trnková. XVII. Workshop of Physical Chemists and Electrochemists. 1st ed. Brno: Masarykova univerzita, 2017, p. 16-16. ISBN 978-80-210-8580-0.

HRBÁČ, Jan, Jan ROZSYPAL, Daniel RIMAN, Vladimír HALOUZKA, Dušan HEMZAL and Vít PAVELKA. Electrochemical Preparation of Nanostructures for Amperometric and SERS Sensors. In Tomáš Navrátil, Miroslav Fojta, Karolina Schwarzová. XXXVII. Moderní elektrochemické metody. 1st ed. Ústí nad Labem: Srsenová Lenka - BEST servis Ústí nad Labem, 2017, p. 62-65. ISBN 978-80-905221-5-2.

ŠEBESTA, Marek, Madhusoodanan URULANGODI, Barbora ŠTEFANOVIE, Barnabas SZAKAL, Martin PAČESA, Michael LISBY, Dana BRANZEI and Lumír KREJČÍ. Esc2 promotes Mus81 complex-activity via its SUMO-like and DNA binding domains. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 1, p. 215-230. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkw882.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ and Michaela WIMMEROVÁ. Glycobiochemistry: from bugs to cystic fibrosis. In CEITEC PhD Retreat II. 2017. ISBN 978-80-210-8550-3.

JANČAŘÍKOVÁ, Gita, Josef HOUSER, Pavel DOBEŠ, Gabriel DEMO, Pavel HYRŠL and Michaela WIMMEROVÁ. Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity. PLoS Pathogens. San Francisco: Public Library of Science, 2017, vol. 13, No 8, p. 1-28. ISSN 1553-7366. Available from: https://dx.doi.org/10.1371/journal.ppat.1006564.

JANČAŘÍKOVÁ, Gita, Josef HOUSER, Pavel DOBEŠ, Pavel HYRŠL and Michaela WIMMEROVÁ. Newly identified bangle lectin from Photorhabdus asymbiotica and its role in pathogenesis. In XVIII. setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

HOUSER, Josef, Gita JANČAŘÍKOVÁ, Gabriel DEMO, Pavel DOBEŠ, Pavel HYRŠL and Michaela WIMMEROVÁ. Novel bangle lectin from Photorhabdus asymbiotica: sugar-binding specificity, structure and interaction with host immune system. 2017. ISSN 1211-5894.

LOUŠA, Petr, Hana NEDOZRÁLOVÁ, Erik ŽUPA, Jiří NOVÁČEK and Jozef HRITZ. Phosphorylation of the regulatory domain of human tyrosine hydroxylase 1 monitored using non-uniformly sampled NMR. Biophysical Chemistry. AMSTERDAM: Elsevier, 2017, vol. 223, April, p. 25-29. ISSN 0301-4622. Available from: https://dx.doi.org/10.1016/j.bpc.2017.01.003.

NOVÁČEK, Jiří. Prohlídka laboratoří kryo-elektronové mikroskopie (Visit to Cryo-electron microscopy). 2017.

JANSEN, Séverine, Kateřina MELKOVÁ, Zuzana TROŠANOVÁ, Kateřina HANÁKOVÁ, Milan ZACHRDLA, Jiří NOVÁČEK, Erik ŽUPA, Zbyněk ZDRÁHAL, Jozef HRITZ and Lukáš ŽÍDEK. Quantitative mapping of microtubule-associated protein 2c (MAP2c) phosphorylation and regulatory protein 14-3-3 zeta-binding sites reveals key differences between MAP2c and its homolog Tau. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2017, vol. 292, No 16, p. 6715-6727. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.M116.771097.

NOVÁČEK, Jiří. Science Career Fair. 2017.

HUTER, P., S. ARENZ, L.V. BOCK, M. GRAF, J.O. FRISTER, A. HEUER, L. PEIL, A.L. STAROSTA, I. WOHLGEMUTH, F. PESKE, Jiří NOVÁČEK, O. BERNINGHAUSEN, H. GRUBMULLER, T. TENSON, R. BECKMANN, M.V. RODNINA, A.C. VAIANA and D.N. WILSON. Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Molecular Cell. CAMBRIDGE: CELL PRESS, 2017, vol. 68, No 3, p. 515-533. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2017.10.014.

KACIROVA, M., Jiří NOVÁČEK, P. MAN, V. OBSILOVA and T. OBSIL. Structural Basis for the 14-3-3 Protein-Dependent Inhibition of Phosducin Function. Biophysical Journal. Bethesda, USA: Biophysical Society, 2017, vol. 112, No 7, p. 1339-1349. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2017.02.036.

JASNOVIDOVA, Olga, Magdaléna KREJČÍKOVÁ, Karel KUBÍČEK and Richard ŠTEFL. Structural insight into recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by Rtt103p. EMBO reports. Hoboken: Wiley-Blackwell, 2017, vol. 18, No 6, p. 906-913. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.201643723.

JASNOVIDOVA, Olga, Tomáš KLUMPLER, Karel KUBÍČEK, Sergei KALYNYCH, Pavel PLEVKA and Richard ŠTEFL. Structure and dynamics of the RNAPII CTDsome with Rtt103. Proceeding of the National Academy of Sciences of the USA. The Academy, 2017, vol. 114, No 42, p. 11133-11138. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1712450114.

ŠKUBNÍK, Karel, Jiří NOVÁČEK, Tibor FÜZIK, Antonin PRIDAL, Robert J. PAXTON and Pavel PLEVKA. Structure of deformed wing virus, a major honey bee pathogen. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2017, vol. 114, No 12, p. 3210-3215. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1615695114.

CSÁVÁS, Magdolna, Gita JANČAŘÍKOVÁ, Mihály HERCZEG, Anikó BORBÁS and Michaela WIMMEROVÁ. Synthesis of a-L-fucopyranosidecontaining tri- and tetravalent glycodendrons as high affinity ligands of recombinant Photorhabdus asymbiotica lectin (rPHL). In 14th Bratislava Symposium on Saccharides "Glycochemistry for biology and medicine". 2017. ISBN 978-80-971156-3-0.

SRB, Pavel, Jiří NOVÁČEK, Pavel KADEŘÁVEK, A. RABATINOVA, L. KRÁSNÝ, J. ŽÍDKOVÁ, J. BOBÁĽOVÁ, Vladimír SKLENÁŘ and Lukáš ŽÍDEK. Triple resonance NMR relaxation experiments for studies of intrinsically disordered proteins. Journal of Biomolecular NMR. Dordrecht: Springer, 2017, vol. 69, No 3, p. 133-146. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-017-0138-1.

PEKAŘÍK, Vladimír, Marie PEŠKOVÁ, R. GURAN, Jiří NOVÁČEK, Z. HEGER, Konstantinos TRIPSIANES, Jitender KUMAR and V. ADAM. Visualization of stable ferritin complexes with palladium, rhodium and iridium nanoparticles detected by their catalytic activity in native polyacrylamide gels. Dalton Transactions. Cambridge: Royal Society of Chemistry, 2017, vol. 46, No 40, p. 13690-13694. ISSN 1477-9226. Available from: https://dx.doi.org/10.1039/C7DT02818K.

KIVI, Rait, Karina SOLOVJOVA, Tiv HALJASORG, Piret ARUKUUSK and Jaak JARV. Allosteric Effect of Adenosine Triphosphate on Peptide Recognition by 3 ' 5 '-Cyclic Adenosine Monophosphate Dependent Protein Kinase Catalytic Subunits. The Protein Journal. NEW YORK: SPRINGER, 2016, vol. 35, No 6, p. 459-466. ISSN 1572-3887. Available from: https://dx.doi.org/10.1007/s10930-016-9691-9.

RÉBLOVÁ, Kamila, Lenka RADOVÁ, Andrea ČECHOVÁ, Michal RŮŽIČKA, Naděžda ŠPAČKOVÁ, Petr KULHÁNEK and Lenka FAJKUSOVÁ. Analysis of intrinsic properties of mutation motifs (coldspots-hotspots) in genes associated with inherited disorders using molecular dynamics methods. In 21st EuroQSAR. 2016.

SEDLÁČEK, Vojtěch, Tomáš KLUMPLER, Jaromír MAREK and Igor KUČERA. Biochemical properties and crystal structure of the flavin reductase FerA from Paracoccus denitrificans. Microbiological Research. ELSEVIER GMBH, URBAN & FISCHER VERLAG, 2016, vol. 188, No 1, p. 9-22. ISSN 0944-5013. Available from: https://dx.doi.org/10.1016/j.micres.2016.04.006.

KREJČÍKOVÁ, Magdaléna, Konstantinos GKIONIS, Dušan HEMZAL, JA PLATTS, P PAPADIA, N MARGIOTTA, J SPONER and Karel KUBÍČEK. Combining NMR (Nuclear Magnetic Resonance) and Raman spectroscopy reveals structural and functional features of a new cisplatin derivative. 2016.

ŠPAČKOVÁ, Naděžda and Kamila RÉBLOVÁ. Effect of a modified base on stability and flexibility of RNA duplexes: molecular dynamics and thermodynamics study. In 21st EuroQSAR. 2016.

SHARMA, Vimal Kumar, David HYNEK, Libuše TRNKOVÁ, Dušan HEMZAL, Marian MÁRIK, René KIZEK and Jaromír HUBÁLEK. Electrochemical determination of adenine using a glassy carbon electrode modified with graphene oxide and polyaniline. Microchimica Acta. Wien: Springer-Verlag, 2016, vol. 183, No 4, p. 1299-1306. ISSN 0026-3672. Available from: https://dx.doi.org/10.1007/s00604-015-1740-0.

HOUSER, Josef, Atul KUMAR, Gita JANČAŘÍKOVÁ, Jan KOMÁREK, Gabriel DEMO and Michaela WIMMEROVÁ. Lectins with beta-propeller fold in opportunistic pathogens. In XIV Discussions in Structural Molecular Biology. 2016. ISSN 1211-5894.

NOVÁČEK, Jiří. Optimalizace přípravy malých proteinových komplexů pro kryo- elektronovou mikroskopii (Optimization of small protein complexes for cryo-electron microscopy). Brno: EYEN SE, 2016, 2 pp.

NOVÁČEK, Jiří. Příprava vzorku pro in situ strukturní biologii (Sample preparation for in situ structural biology). Brno: FEI Czech Republic s.r.o., 2016, 2 pp.

JASNOVIDOVA, Olga, Magdaléna KREJČÍKOVÁ, Karel KUBÍČEK and Richard ŠTEFL. Recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by 3 '-end processing apparatus. In 41st FEBS Congress on Molecular and Systems Biology for a Better Life. 2016. ISSN 1742-464X.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Structure and function of Photorhabdus asymbiotica lectins: Studies of potential virulence factors from emerging human pathogen. In XXV. Biochemický sjezd, 2016. 2016. ISBN 978-80-270-0331-0.

MULLAPUDI, Edukondalu, Jiří NOVÁČEK, Lenka PÁLKOVÁ, Pavel KULICH, A. Michael LINDBERG, Frank J. M. VAN KUPPEVELD and Pavel PLEVKA. Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3. JOURNAL OF VIROLOGY. WASHINGTON: AMER SOC MICROBIOLOGY, 2016, vol. 90, No 17, p. 7628-7639. ISSN 0022-538X. Available from: https://dx.doi.org/10.1128/JVI.00746-16.

NOVÁČEK, Jiří, Marta ŠIBOROVÁ, Martin BENEŠÍK, Roman PANTŮČEK, Jiří DOŠKAŘ and Pavel PLEVKA. Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2016, vol. 113, No 33, p. 9351-9356. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1605883113.

PERCZEL, András, Atanas G. ATANASOV, Vladimír SKLENÁŘ, Jiří NOVÁČEK, Veronika PAPOUŠKOVÁ, Pavel KADEŘÁVEK, Lukáš ŽÍDEK, Henryk KOZLOWSKI, Joanna WATLY, Aleksandra HECEL, Paulina KOLKOWSKA, Jaroslav KOČA, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PRAVDA, David SEHNAL, Vladimír HORSKÝ, Stanislav GEIDL, Ricardo D. ENRIZ, Pavel MATĚJKA, Adéla JENIŠTOVÁ, Marcela DENDISOVÁ, Alžběta KOKAISLOVÁ, Volkmar WEISSIG, Mark OLSEN, Aidan COFFEY, Jude AJUEBOR, Ruth KEARY, Marta SANZ-GAITERO, Mark J. VAN RAAIJ, Olivia MCAULIFFE, Birgit WALTENBERGER, Andrei MOCAN, Karel ŠMEJKAL, Elke H. HEISS, Marc DIEDERICH, Robert MUSIOL, Janez KOŠMRLJ, Jaroslaw POLANSKI and Josef JAMPÍLEK. The Eighth Central European Conference “Chemistry towards Biology”: Snapshot. MOLECULES. Basel: MDPI AG, 2016, vol. 21, No 10, p. nestránkováno, 27 pp. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules21101381.

NOVÁČEK, Jiří. Určení struktury komplexů dyneinu pomocí kryo-elektronové mikroskopie (Structure determination of dynein complexes using cryo-electron microscopy). Brno: Medical Research Council, 2016, 2 pp.

NOVÁČEK, Jiří. Určení struktury proteinu spojeného s Huntingtonovou chorobou (Structure determination of protein connected to Huntington disease). Brno: Korea Advanced Institute of Science and Technology, 2016, 2 pp.

NOVÁČEK, Jiří. Určení struktury virových částic (Cryo-electron microscopy data acquisition of viral particles). Brno: Sanofi Pasteur, 2016, 2 pp.

NOVÁČEK, Jiří. Využití elektronové mikroskopie ve strukturní biologii (Usage of electron microscopy in structural biology). 2016.

KUBÍČEK, Karel, Magdaléna KREJČÍKOVÁ, Pavel BRÁZDA, Eliška ŠMIŘÁKOVÁ, Jiří NOVÁČEK, Patrick CRAMER and Richard ŠTEFL. What are the key aspects of interaction between RNA polymerase II C-terminal domain phosphorylated on tyrosine-1 and the elongation factors. In 41st FEBS Congress on Molecular and Systems Biology for a Better Life. 2016. ISSN 1742-464X.

KŘENEK, Aleš, Karel KUBÍČEK, Richard ŠTEFL and Jiří FILIPOVIČ. Accurate Fitting SAXS Curves with NMR Structure Ensembles. Online. In Simon Lin, Vicky Huang. Proceedings of International Symposium on Grids and Clouds 2015. Pissa: Proceedings of Science, 2015, p. nestránkováno, 9 pp. ISSN 1824-8039.

KLUMPLER, Tomáš, Tereza GERGURI, Olga JASNOVIDOVA, Lumír KREJČÍ, Karel KUBÍČEK, Daniel NĚMEČEK, Vojtěch SEDLÁČEK and Richard ŠTEFL. Biological Small Angle X-ray Scattering at CEITEC-MU. Materials Structure in Chemistry, Biology, Physics and Technology. Praha: Krystalografická společnost, 2015, vol. 22, No 3, p. 127-132. ISSN 1211-5894.

KREPL, Miroslav, Marek HAVRILA, Petr STADLBAUER, Pavel BANÁŠ, Michal OTYEPKA, Josef PASULKA, Richard ŠTEFL and Jiří ŠPONER. Can We Execute Stable Microsecond-Scale Atomistic Simulations of Protein-RNA Complexes? Journal of Chemical Theory and Computation. WASHINGTON: AMER CHEMICAL SOC, 2015, vol. 11, No 3, p. 1220-1243. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/ct5008108.

MACRAILD, Christopher A., Milan ZACHRDLA, Dean ANDREW, Bankala KRISHNARJUNA, Jiří NOVÁČEK, Lukáš ŽÍDEK, Vladimír SKLENÁŘ, Jack S. RICHARDS, James G. BEESON, Robin F. ANDERS and Raymond S. NORTON. Conformational dynamics and antigenicity in the disordered malaria antigen merozoite surface protein 2. PLOS ONE. San Francisco: Public Library Science, 2015, vol. 10, No 3, p. "nestránkováno", 18 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0119899.

ZEBRET, Soumalia, Eliane VÖGELE, Tomáš KLUMPLER and Josef HAMÁČEK. Designing Artificial 3D Helicates: Unprecedented Self-Assembly of Homo-octanuclear Tetrapods with Europium. Chemistry - A European Journal. Weinheim: WILEY-VCH Verlag, 2015, vol. 21, No 18, p. 6695-6699. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.201500006.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Photorhabdus asymbiotica lectins: structure and function of putative virulence factors. In XVII. setkání biochemiků a molekulárních biologů. 2015. ISBN 978-80-210-8015-7.

KLENOVSKÝ, Petr, Dušan HEMZAL, Petr STEINDL, Markéta ZÍKOVA, Vlastimil KŘÁPEK and Josef HUMLÍČEK. Polarization anisotropy of the emission from type-II quantum dots. Physical Review B. COLLEGE PK: The American Physical Society, 2015, vol. 92, No 24, p. "nestránkováno", 5 pp. ISSN 1098-0121. Available from: https://dx.doi.org/10.1103/PhysRevB.92.241302.

ANDREAS, Loren B., Jan STANĚK, Tanguy LE MARCHAND, Andrea BERTARELLO, Diane Cala-De PAEPE, Daniela LALLI, Magdaléna KREJČÍKOVÁ, Camille DOYEN, Carl OSTER, Benno KNOTT, Sebastian WEGNER, Frank ENGELKE, Isabella C. FELLI, Roberta PIERATTELLI, Nicholas E. DIXON, Lyndon EMSLEY, Torsten HERRMANN and Guido PINTACUDA. Protein residue linking in a single spectrum for magic-angle spinning NMR assignment. Journal of biomolecular NMR. Dordrecht: Springer, 2015, vol. 62, No 3, p. 253-261. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-015-9956-1.

HROŠŠOVÁ, Dominika, Tomáš ŠIKORSKÝ, David POTĚŠIL, Marek BARTOŠOVIČ, Josef PASULKA, Zbyněk ZDRÁHAL, Richard ŠTEFL and Štěpánka VAŇÁČOVÁ. RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3 '-end extended forms of snRNAs. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 8, p. 4236-4248. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv240.

NEČASOVÁ, Ivona, Tomáš KLUMPLER, Karel KUBÍČEK and Ctirad HOFR. Revisiting the role of TRF2 basic domain in chromatin maintenance with the most recent structural and functional approaches. In EMBO Workshop Telomeric chromatin and telomere fragility. 2015.

NOVÁČEK, Jiří. Strukturní analýza malého proteinového komplexu (Single particle analysis of small protein complexes). Brno: Eyen Life Sciences s.r.o., 2015, 2 pp.

JANČAŘÍKOVÁ, Gita, Gabriel DEMO, Jan KOMÁREK and Michaela WIMMEROVÁ. Study of PHL lectin from Photorabdus asymbiotica to revealing its role in pathogenesis. In XVII. setkání biochemiků a molekulárních biologů. 2015. ISBN 978-80-210-8015-7.

TUDEK, Agnieszka, Odil Porrua FUERTE, Tomasz KABZINSKI, Michael LIDSCHREIBER, Karel KUBÍČEK, Andrea FOŘTOVÁ, Francoise LACROUTE, Štěpánka VAŇÁČOVÁ, Patrick CRAMER, Richard ŠTEFL and Domenico LIBRI. Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation. Molecular Cell. CAMBRIDGE: CELL PRESS, 2014, vol. 55, No 3, p. 467-481. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2014.05.031.

BAČÍKOVÁ, Veronika, Josef PASULKA, Karel KUBÍČEK and Richard ŠTEFL. Structure and semi-sequence-specific RNA binding of Nrd1. Nucleic Acids Research. United Kingdom: Oxford University Press, 2014, vol. 42, No 12, p. 8024-8038. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gku446.

VORÁČOVÁ, Ivona, Jakub VANĚK, Josef PASULKA, Zora STŘELCOVÁ, Přemysl LUBAL and Petr HERMANN. Dissociation kinetics study of copper(II) complexes of DO3A, DOTA and its monosubstituted derivatives. Polyhedron. OXFORD: Elsevier Science Ltd., 2013, vol. 61, Sep, p. 99-104. ISSN 0277-5387. Available from: https://dx.doi.org/10.1016/j.poly.2013.05.042.

LABUTA, Jan, Shinsuke ISHIHARA, Tomáš ŠIKORSKÝ, Zdeněk FUTERA, Atsuomi SHUNDO, Lenka HANYKOVÁ, Jaroslav BURDA, Katsuhiko ARIGA and Jonathan P. HILL. NMR spectroscopic detection of chirality and enantiopurity in referenced systems without formation of diastereomers. NATURE COMMUNICATIONS. LONDON: NATURE PUBLISHING GROUP, 2013, vol. 4, July, p. "nestránkováno", 8 pp. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/ncomms3188.

JASNOVIDOVA, Olga and Richard ŠTEFL. The CTD code of RNA polymerase II: a structural view. Wiley Interdisciplinary Reviews: RNA. Hoboken, USA: WILEY-BLACKWELL, 2013, vol. 4, No 1, p. 1-16. ISSN 1757-7004. Available from: https://dx.doi.org/10.1002/wrna.1138.

HOLUB, Peter, Jana LALÁKOVÁ, Hana ČERNÁ, Josef PASULKA, Marie SÁRAZOVÁ, Kristýna HRAZDILOVÁ, Maria SAŇUDO ARCE, Fruzsina HÓBOR, Richard ŠTEFL and Štěpánka VAŇÁČOVÁ. Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation. Nucleic Acids Research. Oxford: Oxford University Press, 2012, vol. 40, No 12, p. 5679-5693. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gks223.

ISHIHARA, Shinsuke, Jan LABUTA, Tomáš ŠIKORSKÝ, Jaroslav V. BURDA, Naoko OKAMOTO, Hideki ABE, Katsuhiko ARIGA and Jonathan P HILL. Colorimetric detection of trace water in tetrahydrofuran using N,N '-substituted oxoporphyrinogens. Chemical Communications. London: Royal Society of Chemistry, 2012, vol. 48, No 33, p. 3933-3935. ISSN 1359-7345. Available from: https://dx.doi.org/10.1039/c2cc31118f.

PORRUA-FUERTE, Odil, Fruzsina HÓBOR, Jocelyne BOULAY, Karel KUBÍČEK, Yves D’AUBENTON-CARAFA, Rajani Kanth GUDIPATI, Richard ŠTEFL and Domenico LIBRI. In vivo SELEX reveals novel sequence and structural determinants of Nrd1-Nab3-Sen1 dependent transcription termination. EMBO Journal. NEW YORK: NATURE PUBLISHING GROUP, 2012, vol. 31, No 19, p. 3935-3948. ISSN 0261-4189. Available from: https://dx.doi.org/10.1038/emboj.2012.237.

BYSTRICKÝ, Peter, Marie POKORNÁ, Karel KUBÍČEK, Lukáš ŽÍDEK and Michaela WIMMEROVÁ. NMR STUDY - RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. In 2nd EAST NMR Young Investigator's meeting. 2012.

SUCHÁNKOVÁ, Tereza, Karel KUBÍČEK, Jana KAŠPÁRKOVÁ, Viktor BRABEC and Jiří KOZELKA. Platinum-DNA interstrand crosslinks: Molecular determinants of bending and unwinding of the double helix. Journal of Inorganic Biochemistry. New York, USA: Elsevier Science Inc, 2012, vol. 108, No 1, p. 69-79. ISSN 0162-0134. Available from: https://dx.doi.org/10.1016/j.jinorgbio.2011.09.025.

BYSTRICKÝ, Peter, Marie POKORNÁ, Karel KUBÍČEK, Michaela WIMMEROVÁ and Lukáš ŽÍDEK. RALSTONIA SOLANACEARUM LECTIN INTERACTIONS, A NMR STUDY. In 26th Intenational Carbohydrate Symposium 2012 abstracts. 2012.

ŠIKORSKÝ, Tomáš, Fruzsina HÓBOR, Eva KRIŽANOVÁ, Josef PASULKA, Karel KUBÍČEK and Richard ŠTEFL. Recognition of asymmetrically dimethylated arginine by TDRD3. Nucleic Acids Research. Oxford: Oxford University Press, 2012, vol. 40, No 22, p. 11748-11755. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gks929.

ŠTEFL, Richard and Vladimír SKLENÁŘ. RNA. In Ivano Pertini, Kathleen S. McGreevy, Giacomo Parigi. NMR of Biomolecules, Towards Mechanistic System Biology. 1st ed. Weinheim, Německo: Wiley-Blackwell, 2012, p. 119-135. ISBN 978-3-527-32850-5.

KUBÍČEK, Karel, Hana ČERNÁ, Peter HOLUB, Josef PASULKA, Dominika HROŠŠOVÁ, Frank LOEHR, Ctirad HOFR, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1. Genes & Development. New York: Cold Spring Harbor Laboratory Press, 2012, vol. 26, No 17, p. 1891-1896. ISSN 0890-9369. Available from: https://dx.doi.org/10.1101/gad.192781.112.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA and Michaela WIMMEROVÁ. NMR STUDY OF INTERACTIONS OF RALSTONIA SOLANACEARUM LECTIN. In XV. Setkání biochemiků a molekulárních biologů Sborník příspěvků. 2011. ISBN 978-80-210-5594-0.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA and Michaela WIMMEROVÁ. NMR STUDY OF RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. In EuroCarb 2011 abstracts. 2011.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA and Michaela WIMMEROVÁ. NMR STUDY OF RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. 2011. ISBN 978-80-86313-34-4.

HÓBOR, Fruzsina, Roberto PERGOLI, Karel KUBÍČEK, Dominika HROŠŠOVÁ, Veronika BAČÍKOVÁ, Michal ZIMMERMANN, Josef PASULKA, Ctirad HOFR, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. Recognition of transcription termination signal by the nuclear polyadenylated RNA-binding (Nab)3 protein. The Journal of Biological Chemistry. Am. Soc. for Biochem. and Mol. Biol., 2011, vol. 286, No 5, p. 3645-3657. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.M110.158774.

ŠMIŘÁKOVÁ, Eliška, Paride PAPADIA, Fabio ARNESANO, Giovanni NATILE, Karel KUBÍČEK and Jiří KOZELKA. Using NMR spectroscopy for improvement of cisplatin-based drugs. In Instruments and methods for biology and medicine 2011. 2011. ISBN 978-80-01-04915-0.

KUBÍČEK, Karel, Josef PASULKA, Hana ČERNÁ, Frank LÖHR and Richard ŠTEFL. 1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II. Biomolecular NMR Assignments. Netherlands: Springer Netherlands, 2011, vol. 5, No 2, p. 203-205. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-011-9300-y.

PASULKA, Josef, Jaroslav KOČA and Richard ŠTEFL. The computational view inside the dynamical behavior of the RNA-binding motive. In 8th Discussions in Structural Molecular Biology, Nove Hrady, March 18 - 20, 2010. 2010. ISSN 1211-5894.

ŠTEFL, Richard, Florian OBERSTRASS, Jeniffer HOOD, Muriel JOURDAN, Michal ZIMMERMANN, Lenka SKŘÍŠOVSKÁ, Christophe MARIS, Li PENG, Ctirad HOFR, Ronald EMESON and Frederic ALLAIN. The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove. CELL. UNITED STATES: CELL PRESS, 2010, vol. 143, No 2, p. 225-237. ISSN 0092-8674.

PERGOLI, Roberto, Karel KUBÍČEK, Fruzsina HÓBOR, Josef PASULKA and Richard ŠTEFL. (1)H, (13)C, and (15)N chemical shift assignments for the RNA recognition motif of Nab3. Biomolecular NMR Assignments. UNITED STATES: SPRINGER, 2010, vol. 4, No 1, p. 119-121. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-010-9221-1.

SAŇUDO ARCE, Maria, Martin JACKO, Christiane RAMMELT, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. 1H, 13C, and 15N chemical shift assignments of ZCCHC9. Biomolecular NMR Assignments. SPRINGER, 2010, vol. 5, No 1, p. 19-21. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-010-9257-2.

ČERNÁ, Hana, Karel KUBÍČEK and Richard ŠTEFL. Recognition of phosphorylated CTD of RNA Pol II by Nrd1. In Recognition of phosphorylated CTD of RNA Pol II by Nrd1. 2009. ISSN 1211-5894.

HÓBOR, Fruzsina, Karel KUBÍČEK, Josef PASULKA and Richard ŠTEFL. Structure and RNA binding of Nab3. In Structure and RNA binding of Nab3. 2009. ISSN 1211-5894.

PASULKA, Josef, Jaroslav KOČA and Richard ŠTEFL. The molecular dynamics study of the RNA-binding domain of ADAR2 bound to dsRNA. In 7th Discussions in Structural Molecular Biology Nove Hrady, 12 - 14 March 2009. 2009. ISSN 1211-5894.

HÓBOR, Fruzsina, Hana ČERNÁ, Veronika BAČÍKOVÁ, Josef PASULKA, Karel KUBÍČEK and Richard ŠTEFL. Transcription termination of nonpolyadenylated transcripts. In Transcription termination of nonpolyadenylated transcripts. 2009. ISSN 1211-5894.

VAŇÁČOVÁ, Štěpánka and Richard ŠTEFL. The exosome and RNA quality control in the nucleus. EMBO REPORTS. Nature Publishing Group, London, UK: Nature Publishing Group, London, UK, 2007, vol. 8, No 7, p. 651-657. ISSN 1469-221X.

SKRISOVSKA, Lenka, Cyril BOURGEOIS, Richard ŠTEFL, Sushma-Nagaraja GRELLSCHEID, Liliane KISTER, Philipp WENTER, David ELLIOTT, James STEVENIN and Frederic ALLAIN. The testis-specific human protein RBMY recognizes RNA through a novel mode of interaction. EMBO REPORTS. Nature Publishing Group, London, UK: Nature Publishing Group, London, UK, 2007, vol. 8, No 4, p. 372–379. ISSN 1469-221X.