Výpis publikací

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ a Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkae453.

MRÁČKOVÁ, Martina, Radek MAREČEK, Jiří MEKYSKA, Milena KOŠŤÁLOVÁ a Irena REKTOROVÁ. Levodopa may modulate specific speech impairment in Parkinson's disease: an fMRI study. Journal of Neural Transmission. Vienna: SPRINGER, 2024, roč. 131, č. 2, s. 181-187. ISSN 0300-9564. Dostupné z: https://dx.doi.org/10.1007/s00702-023-02715-5.

LINHARTOVÁ, Kateřina, Francesco Luca FALGINELLA, Martin MÁTL, Marek ŠEBESTA, Robert VÁCHA a Richard ŠTEFL. Sequence and structural determinants of RNAPII CTD phase-separation and phosphorylation by CDK7. Nature Communications. Berlin: Nature Research, 2024, roč. 15, č. 1, s. 1-17. ISSN 2041-1723. Dostupné z: https://dx.doi.org/10.1038/s41467-024-53305-2.

KEOWN, Jeremy, Alaa BAAZAOUI, Marek ŠEBESTA, Richard ŠTEFL, Loic CARRIQUE, Ervin FODOR a Jonathan M GRIMES. Structural and functional characterization of the interaction between the influenza A virus RNA polymerase and the CTD of host RNA polymerase II. Journal of Virology. WASHINGTON: American Society for Microbiology, 2024, roč. 98, č. 5, s. 1-15. ISSN 0022-538X. Dostupné z: https://dx.doi.org/10.1128/jvi.00138-24.

ZAPLETAL, David, Karel KUBÍČEK, Petr SVOBODA a Richard ŠTEFL. Dicer structure and function: conserved and evolving features. EMBO reports. Wiley, 2023, roč. 24, č. 7, s. 1-13. ISSN 1469-221X. Dostupné z: https://dx.doi.org/10.15252/embr.202357215.

HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL a Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, roč. 51, č. 6, s. 2818-2837. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkad092.

PAPAGEORGIOU, Anna, Michaela POSPÍŠILOVÁ, Jakub CIBULKA, Raghib ASHRAF, Christopher WAUDBY, Pavel KADEŘÁVEK, Volha MAROZ, Karel KUBÍČEK, Zbyněk PROKOP, Lumír KREJČÍ a Konstantinos TRIPSIANES. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase. Nature Communications. Berlin: Nature, 2023, roč. 14, č. 1, s. 1-19. ISSN 2041-1723. Dostupné z: https://dx.doi.org/10.1038/s41467-023-42503-z.

ZÁVODNÍK, Michal, Petr FAJKUS, Michal FRANEK, David KOPECKÝ, Sonia GARCIA, Steven DODSWORTH, Andres OREJUELA, Agata Magdalena KILAR, Jiri PTACEK, Martin MÁTL, Anna HÝSKOVÁ, Jiří FAJKUS a Vratislav PEŠKA. Telomerase RNA gene paralogs in plants - the usual pathway to unusual telomeres. New Phytologist. HOBOKEN: Blackwell Science, 2023, roč. 239, č. 6, s. 2353-2366. ISSN 0028-646X. Dostupné z: https://dx.doi.org/10.1111/nph.19110.

LONG, Qilin, Marek ŠEBESTA, Kateřina ŠEDOVÁ, Vojtěch HALUZA, Adele ALAGIA, Zhichao LIU, Richard ŠTEFL a Monika GULLEROVA. The phosphorylated trimeric SOSS1 complex and RNA polymerase II trigger liquid-liquid phase separation at double-strand breaks. Cell Reports. Elsevier, 2023, roč. 42, č. 12, s. 1-25. ISSN 2211-1247. Dostupné z: https://dx.doi.org/10.1016/j.celrep.2023.113489.

KELLNER, Max J, James J ROSS, Jakob SCHNABL, Marcus P S DEKENS, Martin MÁTL, Robert HEINEN, Irina GRISHKOVSKAYA, Benedikt BAUER, Johannes STADLMANN, Luis MENENDEZ-ARIAS, Andrew D STRAW, Robert FRITSCHE-POLANZ, Marianna TRAUGOTT, Tamara SEITZ, Alexander ZOUFALY, Manuela FOEDINGER, Christoph WENISCH, Johannes ZUBER, Andrea PAULI a Julius BRENNECKE. A Rapid, Highly Sensitive and Open-Access SARS-CoV-2 Detection Assay for Laboratory and Home Testing. Frontiers in Molecular Biosciences. Lausanne: Frontiers Media SA, 2022, roč. 9. ISSN 2296-889X. Dostupné z: https://dx.doi.org/10.3389/fmolb.2022.801309.

KASILIAUSKAITE, Aiste, Karel KUBÍČEK, Tomáš KLUMPLER, Martina ZÁNOVÁ, David ZAPLETAL, Eliska KOUTNA, Jiří NOVÁČEK a Richard ŠTEFL. Cooperation between intrinsically disordered and ordered regions of Spt6 regulates nucleosome and Pol II CTD binding, and nucleosome assembly. Nucleic acids research. Oxford: Oxford University Press, 2022, roč. 50, č. 10, s. 5961-5973. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkac451.

ZAPLETAL, David, Karel KUBÍČEK, Martina ZÁNOVÁ, Radek MALIK, Marek ŠEBESTA, Jiří NOVÁČEK, Petr SVOBODA a Richard ŠTEFL. Cryo-EM reveals the structural basis for the regulatory function of HEL1 domain in vertebrate DICERs. In Instruct Biennial Structural Biology ConferenceMuntgebouw, Utrecht, The Netherlands | 19-20 May, 2022. 2022.

ZAPLETAL, David, Eliska TABORSKA, Josef PASULKA, Radek MALIK, Karel KUBÍČEK, Martina ZÁNOVÁ, Christian MUCH, Marek ŠEBESTA, Valeria BUCCHERI, Filip HORVAT, Irena JENICKOVA, Michaela PROCHAZKOVA, Jan PROCHAZKA, Matyáš PINKAS, Jiří NOVÁČEK, Diego F JOSEPH, Radislav SEDLACEK, Carrie BERNECKY, Donal CARROLL, Richard ŠTEFL a Petr SVOBODA. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. CAMBRIDGE: CELL PRESS, 2022, roč. 82, č. 21, s. 4064-4079, 30 s. ISSN 1097-2765. Dostupné z: https://dx.doi.org/10.1016/j.molcel.2022.10.010.

APPEL, Lisa-Marie, Vedran FRANKE, Melania BRUNO, Irina GRISHKOVSKAYA, Aiste KASILIAUSKAITE, Tanja KAUFMANN, Ursula E. SCHOEBERL, Martin G. PUCHINGER, Sebastian KOSTRHON, Carmen EBENWALDNER, Marek ŠEBESTA, Etienne BELTZUNG, Karl MECHTLER, Gen LIN, Anna VLASOVA, Martin LEEB, Rushad PAVRI, Alexander STARK, Altuna AKALIN, Richard ŠTEFL, Carrie BERNECKY, Kristina DJINOVIC-CARUGO a Dea SLADE. PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC. Nature Communications. London: Nature Publishing Group, 2021, roč. 12, č. 1, s. 6078-6101. ISSN 2041-1723. Dostupné z: https://dx.doi.org/10.1038/s41467-021-26360-2.

KASILIAUSKAITE, Aiste, Richard ŠTEFL, Tomáš KLUMPLER a Jiří NOVÁČEK. A Structural Basis for the Cross-Talk Between Histones and RNA Polymerase II. In CEITEC PhD Conference. 2020.

WIMMEROVÁ, Michaela, Monika KUBÍČKOVÁ a Jiří NOVÁČEK. Instruct-ERIC and ARBRE-MOBIEU Workshop: Analysis and Optimization of Sample Quality for Cryo-electron Microscopy and Other Structural Techniques. 2020.

LINHARTOVÁ, Kateřina, Jakub MACOŠEK, Veronika JANŠTOVÁ, Eliška ŠMIŘÁKOVÁ, Karel KUBÍČEK a Richard ŠTEFL. Recognition of RNA Polymerase II C-terminal domain by RPRD2. In CEITEC PhD Conference. 2020.

KLÁPŠŤOVÁ, Veronika, Marek ŠEBESTA, Jiří NOVÁČEK a Richard ŠTEFL. Structural Characterization of the Interaction Between BRCA1-BARD1 and RNA Polymerase II. In CEITEC PhD Conference. 2020.

HAN, Z., Olga JASNOVIDOVA, N. HAIDARA, A. TUDEK, Karel KUBÍČEK, D. LIBRI, Richard ŠTEFL a O. PORRUA. Termination of non-coding transcription in yeast relies on both an RNA Pol II CTD interaction domain and a CTD-mimicking region in Sen1. EMBO Journal. Hoboken (USA): WILEY-BLACKWELL, 2020, roč. 39, č. 7, s. 101548-101569. ISSN 0261-4189. Dostupné z: https://dx.doi.org/10.15252/embj.2019101548.

BRÁZDA, Pavel, Magdaléna KREJČÍKOVÁ, Aiste KASILIAUSKAITE, Eliška ŠMIŘÁKOVÁ, Tomáš KLUMPLER, Robert VÁCHA, Karel KUBÍČEK a Richard ŠTEFL. Yeast Spt6 Reads Multiple Phosphorylation Patterns of RNA Polymerase II C-Terminal Domain In Vitro. Journal of Molecular Biology. Academic Press, 2020, roč. 432, č. 14, s. 4092-4107. ISSN 0022-2836. Dostupné z: https://dx.doi.org/10.1016/j.jmb.2020.05.007.

SEITZ, K., K. BUCZOLICH, Alžbeta DIKUNOVÁ, Pavel PLEVKA, K. POWER, T. RIIMENAPF a B. LAMP. A molecular clone of Chronic Bee Paralysis Virus (CBPV) causes mortality in honey bee pupae (Apis mellifera). Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, roč. 9, NOV, s. 16274-16284. ISSN 2045-2322. Dostupné z: https://dx.doi.org/10.1038/s41598-019-52822-1.

KASARI, V., A.A. POCHOPIEN, T. MARGUS, V. MURINA, K. TURNBULL, Y. ZHOU, T. NISSAN, M. GRAF, Jiří NOVÁČEK, G.C. ATKINSON, M.J.O. JOHANSSON, D.N. WILSON a V. HAURYLIUK. A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling. Nucleic acids research. Oxford: Oxford University Press, 2019, roč. 47, č. 16, s. 8807-8820. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkz600.

NOVÁČEK, Jiří. Days of Electron Microscopy 2019. 2019.

BERTOLLA, L., I. DLOUHY, E. BARTONICKOVA, Jaromír TOUŠEK, Jiří NOVÁČEK a P. MACOVA. Deconstruction of microfibrillated cellulose into nanocrystalline cellulose rods and mesogenic phase formation in concentrated low-modulus sodium silicate solutions. Cellulose. DORDRECHT: SPRINGER, 2019, roč. 26, č. 7, s. 4325-4344. ISSN 0969-0239. Dostupné z: https://dx.doi.org/10.1007/s10570-019-02364-6.

BRÁZDA, Pavel, Ondrej ŠEDO, Karel KUBÍČEK a Richard ŠTEFL. Efficient and robust preparation of tyrosine phosphorylated intrinsically disordered proteins. BioTechniques. UNITED HOUSE, 2 ALBERT PL, LONDON N3 1QB: FUTURE SCI LTD, 2019, roč. 67, č. 1, s. 16-22. ISSN 0736-6205. Dostupné z: https://dx.doi.org/10.2144/btn-2019-0033.

AXMANN, M., E. SEZGIN, A. KARNER, Jiří NOVÁČEK, M.D. BRODESSER, C. ROHRL, J. PREINER, H. STANGL a B. PLOCHBERGER. Receptor-Independent Transfer of Low Density Lipoprotein Cargo to Biomembranes. NANO LETTERS. WASHINGTON: AMER CHEMICAL SOC, 2019, roč. 19, č. 4, s. 2562-2567. ISSN 1530-6984. Dostupné z: https://dx.doi.org/10.1021/acs.nanolett.9b00319.

KEZAR, A., L. KAVCIC, Martin POLÁK, Jiří NOVÁČEK, I. GUTIERREZ-AGUIRRE, M.T. ZNIDARIC, A. CO, K. STARE, K. GRUDEN, M. RAVNIKAR, D. PAHOVNIK, E. ZAGAR, F. MERZEL, G. ANDERLUH a M. PODOBNIK. Structural basis for the multitasking nature of the potato virus Y coat protein. Science advances. New York: American Association for the Advancement of Science, 2019, roč. 5, č. 7, s. 1-13. ISSN 2375-2548. Dostupné z: https://dx.doi.org/10.1126/sciadv.aaw3808.

BŘENKOVÁ, Barbora, Marta ŠIBOROVÁ, Jiří NOVÁČEK, Pavol BÁRDY, Roman PANTŮČEK a Pavel PLEVKA. Structure of a staphylococcal phage connector protein. In XVI. Discussions in Structural Molecular Biology. 2019.

HEMZAL, Dušan, Yu Ri KANG, Jan DVOŘÁK, Tomasz KABZINSKI, Karel KUBÍČEK, Kim YOUNG DONG a Josef HUMLÍČEK. Treatment of Surface Plasmon Resonance (SPR) Background in Total Internal Reflection Ellipsometry: Characterization of RNA Polymerase II Film Formation. APPLIED SPECTROSCOPY. Thousand Oaks: SAGE PUBLICATIONS INC, 2019, roč. 73, č. 3, s. 261-270. ISSN 0003-7028. Dostupné z: https://dx.doi.org/10.1177/0003702819826280.

EVANGELIDIS, Thomas, S. NERLI, Jiří NOVÁČEK, A.E. BRERETON, P.A. KARPLUS, R.R. DOTAS, V. VENDITTI, N.G. SGOURAKIS a Konstantinos TRIPSIANES. Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra. Nature Communications. London: Nature Publishing Group, 2018, roč. 9, JAN, s. 384-396. ISSN 2041-1723. Dostupné z: https://dx.doi.org/10.1038/s41467-017-02592-z.

KLUMPLER, Tomáš. BioSAXS practical course 2018. 2018.

NOVÁČEK, Jiří. Dny elektronové mikroskopie (prohlídka CF Cryo-EM). 2018.

MELKOVÁ, Kateřina, Vojtěch ZAPLETAL, Séverine JANSEN, Erik NOMILNER, Milan ZACHRDLA, Jozef HRITZ, Jiří NOVÁČEK, M. ZWECKSTETTER, M.R. JENSEN, M. BLACKLEDGE a Lukáš ŽÍDEK. Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2018, roč. 293, č. 34, s. 13297-13309. ISSN 0021-9258. Dostupné z: https://dx.doi.org/10.1074/jbc.RA118.001769.

ŠPÍREK, Mário, Jarmila MLČOUŠKOVÁ, Ondrej BELÁŇ, Máté GYIMESI, Gábor M. HARAMI, Eszter MOLNÁR, Jiří NOVÁČEK, Mihály KOVÁCS a Lumír KREJČÍ. Human RAD51 rapidly forms intrinsically dynamic nucleoprotein filaments modulated by nucleotide binding state. Nucleic Acids Research. Oxford: Oxford University Press, 2018, roč. 46, č. 8, s. 3967-3980. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gky111.

CLARK, S., J.B. MYERS, A. KING, Radovan FIALA, Jiří NOVÁČEK, G. PEARCE, J. HEIERHORST, S.L. REICHOW a E.J. BARBAR. Multivalency regulates activity in an intrinsically disordered transcription factor. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, roč. 7, MAY, s. 1-28. ISSN 2050-084X. Dostupné z: https://dx.doi.org/10.7554/eLife.36258.

NOVÁČEK, Jiří. Practical Workshop on Cryo-electron Microscopy Data Analysis in Scipion. 2018.

BENEŠÍK, Martin, Jiří NOVÁČEK, Lubomír JANDA, Radka DOPITOVÁ, Markéta PERNISOVÁ, Kateřina MELKOVÁ, Lenka TISAKOVA, Jiří DOŠKAŘ, Lukáš ŽÍDEK, Jan HEJÁTKO a Roman PANTŮČEK. Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. Virus Genes. DORDRECHT: Springer US, 2018, roč. 54, č. 1, s. 130-139. ISSN 0920-8569. Dostupné z: https://dx.doi.org/10.1007/s11262-017-1507-2.

CROWE-MCAULIFFE, C., M. GRAF, P. HUTER, H. TAKADA, M. ABDELSHAHID, Jiří NOVÁČEK, V. MURINA, G.C. ATKINSON, V. HAURYLIUK a D.N. WILSON. Structural basis for antibiotic resistance mediated by the Bacillus subtilis ABCF ATPase VmlR. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2018, roč. 115, č. 36, s. 8978-8983. ISSN 0027-8424. Dostupné z: https://dx.doi.org/10.1073/pnas.1808535115.

NOVÁČEK, Jiří. Symposium on recent advances in cryo-electron microscopy. 2018.

SICORELLO, A., G. KELLY, A. OREGIONI, Jiří NOVÁČEK, Vladimír SKLENÁŘ a A. PASTORE. The Structural Properties in Solution of the Intrinsically Mixed Folded Protein Ataxin-3. Biophysical Journal. Bethesda, USA: Biophysical Society, 2018, roč. 115, č. 1, s. 59-71. ISSN 0006-3495. Dostupné z: https://dx.doi.org/10.1016/j.bpj.2018.05.029.

SHEMESH, Keren, Marek ŠEBESTA, Martin PAČESA, Soumitra SAU, Alex BRONSTEIN, Oren PARNAS, Batia LIEFSHITZ, Česlovas VENCLOVAS, Lumír KREJČÍ a Martin KUPIEC. A structure-function analysis of the yeast Elg1 protein reveals the importance of PCNA unloading in genome stability maintenance. Nucleic Acids Research. Oxford: Oxford University Press, 2017, roč. 45, č. 6, s. 3189-3203. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkw1348.

NEČASOVÁ, Ivona, Eliška JANOUŠKOVÁ, Tomáš KLUMPLER a Ctirad HOFR. Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it. Nucleic Acids Research. 2017, roč. 45, č. 21, s. 12170-12180. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkx812.

NEČASOVÁ, Ivona, Eliška JANOUŠKOVÁ, Tomáš KLUMPLER a Ctirad HOFR. Basic domain of telomere guardian TRF2 reduces D-loop unwinding whereas Rap1 restores it (gkx812) (vol 45, pg 12170, 2017). Oxford: Oxford University Press, 2017. Dostupné z: https://dx.doi.org/10.1093/nar/gkx968.

OTRUSINOVÁ, Olga, Gabriel DEMO, Petr PADRTA, Zuzana JASEŇÁKOVÁ, Blanka PEKÁROVÁ, Zuzana GELOVÁ, Agnieszka SZMITKOWSKA, Pavel KADEŘÁVEK, Séverine JANSEN, Milan ZACHRDLA, Tomáš KLUMPLER, Jaromír MAREK, Jozef HRITZ, Lubomír JANDA, Hideo IWAI, Michaela WIMMEROVÁ, Jan HEJÁTKO a Lukáš ŽÍDEK. Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2017, roč. 292, č. 42, s. 17525-17540. ISSN 0021-9258. Dostupné z: https://dx.doi.org/10.1074/jbc.M117.790212.

HALOUZKA, Vladimír, Barbora Agatha HALOUZKOVÁ, David JIROVSKY, Dušan HEMZAL, Petr ONDRA, Eirini SIRANIDI, Athanassios G KONTOS, Polycarpos FALARAS a Jan HRBÁČ. Copper nanowire coated carbon fibers as efficient substrates for detecting designer drugs using SERS. Talanta. AMSTERDAM: Elsevier, 2017, roč. 165, APRIL, s. 384-390. ISSN 0039-9140. Dostupné z: https://dx.doi.org/10.1016/j.talanta.2016.12.084.

TRISTAO RAMOS, Ravi José, Allan Cézar DE AZEVEDO MARTINS, Gabrielle DA SILVA DELGADO, Crina-Maria IONESCU, Peter Turán ÜRMÉNYI, Rosane SILVA a Jaroslav KOČA. CrocoBLAST: Running BLAST efficiently in the age of next-generation sequencing. Bioinformatics. Oxford: Oxford University Press, 2017, roč. 33, č. 22, s. 3648-3651. ISSN 1367-4803. Dostupné z: https://dx.doi.org/10.1093/bioinformatics/btx465.

GRAF, M., S. ARENZ, P. HUTER, A. DONHOFER, Jiří NOVÁČEK a D.N. WILSON. Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions. Nucleic Acids Research. Oxford: Oxford University Press, 2017, roč. 45, č. 5, s. 2887-2896. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkw1272.

RŮŽIČKA, Michal, Petr KULHÁNEK, Lenka RADOVÁ, Andrea ČECHOVÁ, Naděžda ŠPAČKOVÁ, Lenka FAJKUSOVÁ a Kamila RÉBLOVÁ. DNA mutation motifs in the genes associated with inherited diseases. Plos one. San Francisco: Public Library of Science, 2017, roč. 12, č. 8, s. nestránkováno, 16 s. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0182377.

HRBÁČ, Jan, Jan ROZSYPAL, Daniel RIMAN, Vladimír HALOUZKA, Dušan HEMZAL a Vít PAVELKA. Electrochemical and electrophoretic deposition of materials obtained by anodic dissolution of metals in water. Online. In Libuše Trnková. XVII. Workshop of Physical Chemists and Electrochemists. 1. vyd. Brno: Masarykova univerzita, 2017, s. 16-16. ISBN 978-80-210-8580-0.

HRBÁČ, Jan, Jan ROZSYPAL, Daniel RIMAN, Vladimír HALOUZKA, Dušan HEMZAL a Vít PAVELKA. Electrochemical Preparation of Nanostructures for Amperometric and SERS Sensors. In Tomáš Navrátil, Miroslav Fojta, Karolina Schwarzová. XXXVII. Moderní elektrochemické metody. 1. vyd. Ústí nad Labem: Srsenová Lenka - BEST servis Ústí nad Labem, 2017, s. 62-65. ISBN 978-80-905221-5-2.

ŠEBESTA, Marek, Madhusoodanan URULANGODI, Barbora ŠTEFANOVIE, Barnabas SZAKAL, Martin PAČESA, Michael LISBY, Dana BRANZEI a Lumír KREJČÍ. Esc2 promotes Mus81 complex-activity via its SUMO-like and DNA binding domains. Nucleic Acids Research. Oxford: Oxford University Press, 2017, roč. 45, č. 1, s. 215-230. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkw882.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ a Michaela WIMMEROVÁ. Glycobiochemistry: from bugs to cystic fibrosis. In CEITEC PhD Retreat II. 2017. ISBN 978-80-210-8550-3.

JANČAŘÍKOVÁ, Gita, Josef HOUSER, Pavel DOBEŠ, Gabriel DEMO, Pavel HYRŠL a Michaela WIMMEROVÁ. Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity. PLoS Pathogens. San Francisco: Public Library of Science, 2017, roč. 13, č. 8, s. 1-28. ISSN 1553-7366. Dostupné z: https://dx.doi.org/10.1371/journal.ppat.1006564.

JANČAŘÍKOVÁ, Gita, Josef HOUSER, Pavel DOBEŠ, Pavel HYRŠL a Michaela WIMMEROVÁ. Newly identified bangle lectin from Photorhabdus asymbiotica and its role in pathogenesis. In XVIII. setkání biochemiků a molekulárních biologů. 2017. ISBN 978-80-210-8765-1.

HOUSER, Josef, Gita JANČAŘÍKOVÁ, Gabriel DEMO, Pavel DOBEŠ, Pavel HYRŠL a Michaela WIMMEROVÁ. Novel bangle lectin from Photorhabdus asymbiotica: sugar-binding specificity, structure and interaction with host immune system. 2017. ISSN 1211-5894.

LOUŠA, Petr, Hana NEDOZRÁLOVÁ, Erik ŽUPA, Jiří NOVÁČEK a Jozef HRITZ. Phosphorylation of the regulatory domain of human tyrosine hydroxylase 1 monitored using non-uniformly sampled NMR. Biophysical Chemistry. AMSTERDAM: Elsevier, 2017, roč. 223, April, s. 25-29. ISSN 0301-4622. Dostupné z: https://dx.doi.org/10.1016/j.bpc.2017.01.003.

NOVÁČEK, Jiří. Prohlídka laboratoří kryo-elektronové mikroskopie. 2017.

JANSEN, Séverine, Kateřina MELKOVÁ, Zuzana TROŠANOVÁ, Kateřina HANÁKOVÁ, Milan ZACHRDLA, Jiří NOVÁČEK, Erik ŽUPA, Zbyněk ZDRÁHAL, Jozef HRITZ a Lukáš ŽÍDEK. Quantitative mapping of microtubule-associated protein 2c (MAP2c) phosphorylation and regulatory protein 14-3-3 zeta-binding sites reveals key differences between MAP2c and its homolog Tau. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2017, roč. 292, č. 16, s. 6715-6727. ISSN 0021-9258. Dostupné z: https://dx.doi.org/10.1074/jbc.M116.771097.

NOVÁČEK, Jiří. Science Career Fair. 2017.

HUTER, P., S. ARENZ, L.V. BOCK, M. GRAF, J.O. FRISTER, A. HEUER, L. PEIL, A.L. STAROSTA, I. WOHLGEMUTH, F. PESKE, Jiří NOVÁČEK, O. BERNINGHAUSEN, H. GRUBMULLER, T. TENSON, R. BECKMANN, M.V. RODNINA, A.C. VAIANA a D.N. WILSON. Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. Molecular Cell. CAMBRIDGE: CELL PRESS, 2017, roč. 68, č. 3, s. 515-533. ISSN 1097-2765. Dostupné z: https://dx.doi.org/10.1016/j.molcel.2017.10.014.

KACIROVA, M., Jiří NOVÁČEK, P. MAN, V. OBSILOVA a T. OBSIL. Structural Basis for the 14-3-3 Protein-Dependent Inhibition of Phosducin Function. Biophysical Journal. Bethesda, USA: Biophysical Society, 2017, roč. 112, č. 7, s. 1339-1349. ISSN 0006-3495. Dostupné z: https://dx.doi.org/10.1016/j.bpj.2017.02.036.

JASNOVIDOVA, Olga, Magdaléna KREJČÍKOVÁ, Karel KUBÍČEK a Richard ŠTEFL. Structural insight into recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by Rtt103p. EMBO reports. Hoboken: Wiley-Blackwell, 2017, roč. 18, č. 6, s. 906-913. ISSN 1469-221X. Dostupné z: https://dx.doi.org/10.15252/embr.201643723.

JASNOVIDOVA, Olga, Tomáš KLUMPLER, Karel KUBÍČEK, Sergei KALYNYCH, Pavel PLEVKA a Richard ŠTEFL. Structure and dynamics of the RNAPII CTDsome with Rtt103. Proceeding of the National Academy of Sciences of the USA. The Academy, 2017, roč. 114, č. 42, s. 11133-11138. ISSN 0027-8424. Dostupné z: https://dx.doi.org/10.1073/pnas.1712450114.

ŠKUBNÍK, Karel, Jiří NOVÁČEK, Tibor FÜZIK, Antonin PRIDAL, Robert J. PAXTON a Pavel PLEVKA. Structure of deformed wing virus, a major honey bee pathogen. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2017, roč. 114, č. 12, s. 3210-3215. ISSN 0027-8424. Dostupné z: https://dx.doi.org/10.1073/pnas.1615695114.

CSÁVÁS, Magdolna, Gita JANČAŘÍKOVÁ, Mihály HERCZEG, Anikó BORBÁS a Michaela WIMMEROVÁ. Synthesis of a-L-fucopyranosidecontaining tri- and tetravalent glycodendrons as high affinity ligands of recombinant Photorhabdus asymbiotica lectin (rPHL). In 14th Bratislava Symposium on Saccharides "Glycochemistry for biology and medicine". 2017. ISBN 978-80-971156-3-0.

SRB, Pavel, Jiří NOVÁČEK, Pavel KADEŘÁVEK, A. RABATINOVA, L. KRÁSNÝ, J. ŽÍDKOVÁ, J. BOBÁĽOVÁ, Vladimír SKLENÁŘ a Lukáš ŽÍDEK. Triple resonance NMR relaxation experiments for studies of intrinsically disordered proteins. Journal of Biomolecular NMR. Dordrecht: Springer, 2017, roč. 69, č. 3, s. 133-146. ISSN 0925-2738. Dostupné z: https://dx.doi.org/10.1007/s10858-017-0138-1.

PEKAŘÍK, Vladimír, Marie PEŠKOVÁ, R. GURAN, Jiří NOVÁČEK, Z. HEGER, Konstantinos TRIPSIANES, Jitender KUMAR a V. ADAM. Visualization of stable ferritin complexes with palladium, rhodium and iridium nanoparticles detected by their catalytic activity in native polyacrylamide gels. Dalton Transactions. Cambridge: Royal Society of Chemistry, 2017, roč. 46, č. 40, s. 13690-13694. ISSN 1477-9226. Dostupné z: https://dx.doi.org/10.1039/C7DT02818K.

KIVI, Rait, Karina SOLOVJOVA, Tiv HALJASORG, Piret ARUKUUSK a Jaak JARV. Allosteric Effect of Adenosine Triphosphate on Peptide Recognition by 3 ' 5 '-Cyclic Adenosine Monophosphate Dependent Protein Kinase Catalytic Subunits. The Protein Journal. NEW YORK: SPRINGER, 2016, roč. 35, č. 6, s. 459-466. ISSN 1572-3887. Dostupné z: https://dx.doi.org/10.1007/s10930-016-9691-9.

RÉBLOVÁ, Kamila, Lenka RADOVÁ, Andrea ČECHOVÁ, Michal RŮŽIČKA, Naděžda ŠPAČKOVÁ, Petr KULHÁNEK a Lenka FAJKUSOVÁ. Analysis of intrinsic properties of mutation motifs (coldspots-hotspots) in genes associated with inherited disorders using molecular dynamics methods. In 21st EuroQSAR. 2016.

SEDLÁČEK, Vojtěch, Tomáš KLUMPLER, Jaromír MAREK a Igor KUČERA. Biochemical properties and crystal structure of the flavin reductase FerA from Paracoccus denitrificans. Microbiological Research. ELSEVIER GMBH, URBAN & FISCHER VERLAG, 2016, roč. 188, č. 1, s. 9-22. ISSN 0944-5013. Dostupné z: https://dx.doi.org/10.1016/j.micres.2016.04.006.

KREJČÍKOVÁ, Magdaléna, Konstantinos GKIONIS, Dušan HEMZAL, JA PLATTS, P PAPADIA, N MARGIOTTA, J SPONER a Karel KUBÍČEK. Combining NMR (Nuclear Magnetic Resonance) and Raman spectroscopy reveals structural and functional features of a new cisplatin derivative. 2016.

ŠPAČKOVÁ, Naděžda a Kamila RÉBLOVÁ. Effect of a modified base on stability and flexibility of RNA duplexes: molecular dynamics and thermodynamics study. In 21st EuroQSAR. 2016.

SHARMA, Vimal Kumar, David HYNEK, Libuše TRNKOVÁ, Dušan HEMZAL, Marian MÁRIK, René KIZEK a Jaromír HUBÁLEK. Electrochemical determination of adenine using a glassy carbon electrode modified with graphene oxide and polyaniline. Microchimica Acta. Wien: Springer-Verlag, 2016, roč. 183, č. 4, s. 1299-1306. ISSN 0026-3672. Dostupné z: https://dx.doi.org/10.1007/s00604-015-1740-0.

HOUSER, Josef, Atul KUMAR, Gita JANČAŘÍKOVÁ, Jan KOMÁREK, Gabriel DEMO a Michaela WIMMEROVÁ. Lectins with beta-propeller fold in opportunistic pathogens. In XIV Discussions in Structural Molecular Biology. 2016. ISSN 1211-5894.

NOVÁČEK, Jiří. Optimalizace přípravy malých proteinových komplexů pro kryo- elektronovou mikroskopii. Brno: EYEN SE, 2016, 2 s.

NOVÁČEK, Jiří. Příprava vzorku pro in situ strukturní biologii. Brno: FEI Czech Republic s.r.o., 2016, 2 s.

JASNOVIDOVA, Olga, Magdaléna KREJČÍKOVÁ, Karel KUBÍČEK a Richard ŠTEFL. Recognition of phosphorylated threonine-4 of RNA polymerase II C-terminal domain by 3 '-end processing apparatus. In 41st FEBS Congress on Molecular and Systems Biology for a Better Life. 2016. ISSN 1742-464X.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ, Jan KOMÁREK a Michaela WIMMEROVÁ. Structure and function of Photorhabdus asymbiotica lectins: Studies of potential virulence factors from emerging human pathogen. In XXV. Biochemický sjezd, 2016. 2016. ISBN 978-80-270-0331-0.

MULLAPUDI, Edukondalu, Jiří NOVÁČEK, Lenka PÁLKOVÁ, Pavel KULICH, A. Michael LINDBERG, Frank J. M. VAN KUPPEVELD a Pavel PLEVKA. Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3. JOURNAL OF VIROLOGY. WASHINGTON: AMER SOC MICROBIOLOGY, 2016, roč. 90, č. 17, s. 7628-7639. ISSN 0022-538X. Dostupné z: https://dx.doi.org/10.1128/JVI.00746-16.

NOVÁČEK, Jiří, Marta ŠIBOROVÁ, Martin BENEŠÍK, Roman PANTŮČEK, Jiří DOŠKAŘ a Pavel PLEVKA. Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2016, roč. 113, č. 33, s. 9351-9356. ISSN 0027-8424. Dostupné z: https://dx.doi.org/10.1073/pnas.1605883113.

PERCZEL, András, Atanas G. ATANASOV, Vladimír SKLENÁŘ, Jiří NOVÁČEK, Veronika PAPOUŠKOVÁ, Pavel KADEŘÁVEK, Lukáš ŽÍDEK, Henryk KOZLOWSKI, Joanna WATLY, Aleksandra HECEL, Paulina KOLKOWSKA, Jaroslav KOČA, Radka SVOBODOVÁ VAŘEKOVÁ, Lukáš PRAVDA, David SEHNAL, Vladimír HORSKÝ, Stanislav GEIDL, Ricardo D. ENRIZ, Pavel MATĚJKA, Adéla JENIŠTOVÁ, Marcela DENDISOVÁ, Alžběta KOKAISLOVÁ, Volkmar WEISSIG, Mark OLSEN, Aidan COFFEY, Jude AJUEBOR, Ruth KEARY, Marta SANZ-GAITERO, Mark J. VAN RAAIJ, Olivia MCAULIFFE, Birgit WALTENBERGER, Andrei MOCAN, Karel ŠMEJKAL, Elke H. HEISS, Marc DIEDERICH, Robert MUSIOL, Janez KOŠMRLJ, Jaroslaw POLANSKI a Josef JAMPÍLEK. The Eighth Central European Conference “Chemistry towards Biology”: Snapshot. MOLECULES. Basel: MDPI AG, 2016, roč. 21, č. 10, s. nestránkováno, 27 s. ISSN 1420-3049. Dostupné z: https://dx.doi.org/10.3390/molecules21101381.

NOVÁČEK, Jiří. Určení struktury komplexů dyneinu pomocí kryo-elektronové mikroskopie. Brno: Medical Research Council, 2016, 2 s.

NOVÁČEK, Jiří. Určení struktury proteinu spojeného s Huntingtonovou chorobou. Brno: Korea Advanced Institute of Science and Technology, 2016, 2 s.

NOVÁČEK, Jiří. Určení struktury virových částic. Brno: Sanofi Pasteur, 2016, 2 s.

NOVÁČEK, Jiří. Využití elektronové mikroskopie ve strukturní biologii. 2016.

KUBÍČEK, Karel, Magdaléna KREJČÍKOVÁ, Pavel BRÁZDA, Eliška ŠMIŘÁKOVÁ, Jiří NOVÁČEK, Patrick CRAMER a Richard ŠTEFL. What are the key aspects of interaction between RNA polymerase II C-terminal domain phosphorylated on tyrosine-1 and the elongation factors. In 41st FEBS Congress on Molecular and Systems Biology for a Better Life. 2016. ISSN 1742-464X.

KŘENEK, Aleš, Karel KUBÍČEK, Richard ŠTEFL a Jiří FILIPOVIČ. Accurate Fitting SAXS Curves with NMR Structure Ensembles. Online. In Simon Lin, Vicky Huang. Proceedings of International Symposium on Grids and Clouds 2015. Pissa: Proceedings of Science, 2015, s. nestránkováno, 9 s. ISSN 1824-8039.

KLUMPLER, Tomáš, Tereza GERGURI, Olga JASNOVIDOVA, Lumír KREJČÍ, Karel KUBÍČEK, Daniel NĚMEČEK, Vojtěch SEDLÁČEK a Richard ŠTEFL. Biological Small Angle X-ray Scattering at CEITEC-MU. Materials Structure in Chemistry, Biology, Physics and Technology. Praha: Krystalografická společnost, 2015, roč. 22, č. 3, s. 127-132. ISSN 1211-5894.

KREPL, Miroslav, Marek HAVRILA, Petr STADLBAUER, Pavel BANÁŠ, Michal OTYEPKA, Josef PASULKA, Richard ŠTEFL a Jiří ŠPONER. Can We Execute Stable Microsecond-Scale Atomistic Simulations of Protein-RNA Complexes? Journal of Chemical Theory and Computation. WASHINGTON: AMER CHEMICAL SOC, 2015, roč. 11, č. 3, s. 1220-1243. ISSN 1549-9618. Dostupné z: https://dx.doi.org/10.1021/ct5008108.

MACRAILD, Christopher A., Milan ZACHRDLA, Dean ANDREW, Bankala KRISHNARJUNA, Jiří NOVÁČEK, Lukáš ŽÍDEK, Vladimír SKLENÁŘ, Jack S. RICHARDS, James G. BEESON, Robin F. ANDERS a Raymond S. NORTON. Conformational dynamics and antigenicity in the disordered malaria antigen merozoite surface protein 2. PLOS ONE. San Francisco: Public Library Science, 2015, roč. 10, č. 3, s. "nestránkováno", 18 s. ISSN 1932-6203. Dostupné z: https://dx.doi.org/10.1371/journal.pone.0119899.

ZEBRET, Soumalia, Eliane VÖGELE, Tomáš KLUMPLER a Josef HAMÁČEK. Designing Artificial 3D Helicates: Unprecedented Self-Assembly of Homo-octanuclear Tetrapods with Europium. Chemistry - A European Journal. Weinheim: WILEY-VCH Verlag, 2015, roč. 21, č. 18, s. 6695-6699. ISSN 0947-6539. Dostupné z: https://dx.doi.org/10.1002/chem.201500006.

POKORNÝ, Daniel, Gita JANČAŘÍKOVÁ, Jan KOMÁREK a Michaela WIMMEROVÁ. Photorhabdus asymbiotica lectins: structure and function of putative virulence factors. In XVII. setkání biochemiků a molekulárních biologů. 2015. ISBN 978-80-210-8015-7.

KLENOVSKÝ, Petr, Dušan HEMZAL, Petr STEINDL, Markéta ZÍKOVA, Vlastimil KŘÁPEK a Josef HUMLÍČEK. Polarization anisotropy of the emission from type-II quantum dots. Physical Review B. COLLEGE PK: The American Physical Society, 2015, roč. 92, č. 24, s. "nestránkováno", 5 s. ISSN 1098-0121. Dostupné z: https://dx.doi.org/10.1103/PhysRevB.92.241302.

ANDREAS, Loren B., Jan STANĚK, Tanguy LE MARCHAND, Andrea BERTARELLO, Diane Cala-De PAEPE, Daniela LALLI, Magdaléna KREJČÍKOVÁ, Camille DOYEN, Carl OSTER, Benno KNOTT, Sebastian WEGNER, Frank ENGELKE, Isabella C. FELLI, Roberta PIERATTELLI, Nicholas E. DIXON, Lyndon EMSLEY, Torsten HERRMANN a Guido PINTACUDA. Protein residue linking in a single spectrum for magic-angle spinning NMR assignment. Journal of biomolecular NMR. Dordrecht: Springer, 2015, roč. 62, č. 3, s. 253-261. ISSN 0925-2738. Dostupné z: https://dx.doi.org/10.1007/s10858-015-9956-1.

HROŠŠOVÁ, Dominika, Tomáš ŠIKORSKÝ, David POTĚŠIL, Marek BARTOŠOVIČ, Josef PASULKA, Zbyněk ZDRÁHAL, Richard ŠTEFL a Štěpánka VAŇÁČOVÁ. RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3 '-end extended forms of snRNAs. Nucleic Acids Research. Oxford: Oxford University Press, 2015, roč. 43, č. 8, s. 4236-4248. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gkv240.

NEČASOVÁ, Ivona, Tomáš KLUMPLER, Karel KUBÍČEK a Ctirad HOFR. Revisiting the role of TRF2 basic domain in chromatin maintenance with the most recent structural and functional approaches. In EMBO Workshop Telomeric chromatin and telomere fragility. 2015.

NOVÁČEK, Jiří. Strukturní analýza malého proteinového komplexu. Brno: Eyen Life Sciences s.r.o., 2015, 2 s.

JANČAŘÍKOVÁ, Gita, Gabriel DEMO, Jan KOMÁREK a Michaela WIMMEROVÁ. Study of PHL lectin from Photorabdus asymbiotica to revealing its role in pathogenesis. In XVII. setkání biochemiků a molekulárních biologů. 2015. ISBN 978-80-210-8015-7.

TUDEK, Agnieszka, Odil Porrua FUERTE, Tomasz KABZINSKI, Michael LIDSCHREIBER, Karel KUBÍČEK, Andrea FOŘTOVÁ, Francoise LACROUTE, Štěpánka VAŇÁČOVÁ, Patrick CRAMER, Richard ŠTEFL a Domenico LIBRI. Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation. Molecular Cell. CAMBRIDGE: CELL PRESS, 2014, roč. 55, č. 3, s. 467-481. ISSN 1097-2765. Dostupné z: https://dx.doi.org/10.1016/j.molcel.2014.05.031.

BAČÍKOVÁ, Veronika, Josef PASULKA, Karel KUBÍČEK a Richard ŠTEFL. Structure and semi-sequence-specific RNA binding of Nrd1. Nucleic Acids Research. United Kingdom: Oxford University Press, 2014, roč. 42, č. 12, s. 8024-8038. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gku446.

VORÁČOVÁ, Ivona, Jakub VANĚK, Josef PASULKA, Zora STŘELCOVÁ, Přemysl LUBAL a Petr HERMANN. Dissociation kinetics study of copper(II) complexes of DO3A, DOTA and its monosubstituted derivatives. Polyhedron. OXFORD: Elsevier Science Ltd., 2013, roč. 61, Sep, s. 99-104. ISSN 0277-5387. Dostupné z: https://dx.doi.org/10.1016/j.poly.2013.05.042.

LABUTA, Jan, Shinsuke ISHIHARA, Tomáš ŠIKORSKÝ, Zdeněk FUTERA, Atsuomi SHUNDO, Lenka HANYKOVÁ, Jaroslav BURDA, Katsuhiko ARIGA a Jonathan P. HILL. NMR spectroscopic detection of chirality and enantiopurity in referenced systems without formation of diastereomers. NATURE COMMUNICATIONS. LONDON: NATURE PUBLISHING GROUP, 2013, roč. 4, July, s. "nestránkováno", 8 s. ISSN 2041-1723. Dostupné z: https://dx.doi.org/10.1038/ncomms3188.

JASNOVIDOVA, Olga a Richard ŠTEFL. The CTD code of RNA polymerase II: a structural view. Wiley Interdisciplinary Reviews: RNA. Hoboken, USA: WILEY-BLACKWELL, 2013, roč. 4, č. 1, s. 1-16. ISSN 1757-7004. Dostupné z: https://dx.doi.org/10.1002/wrna.1138.

HOLUB, Peter, Jana LALÁKOVÁ, Hana ČERNÁ, Josef PASULKA, Marie SÁRAZOVÁ, Kristýna HRAZDILOVÁ, Maria SAŇUDO ARCE, Fruzsina HÓBOR, Richard ŠTEFL a Štěpánka VAŇÁČOVÁ. Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation. Nucleic Acids Research. Oxford: Oxford University Press, 2012, roč. 40, č. 12, s. 5679-5693. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gks223.

ISHIHARA, Shinsuke, Jan LABUTA, Tomáš ŠIKORSKÝ, Jaroslav V. BURDA, Naoko OKAMOTO, Hideki ABE, Katsuhiko ARIGA a Jonathan P HILL. Colorimetric detection of trace water in tetrahydrofuran using N,N '-substituted oxoporphyrinogens. Chemical Communications. London: Royal Society of Chemistry, 2012, roč. 48, č. 33, s. 3933-3935. ISSN 1359-7345. Dostupné z: https://dx.doi.org/10.1039/c2cc31118f.

PORRUA-FUERTE, Odil, Fruzsina HÓBOR, Jocelyne BOULAY, Karel KUBÍČEK, Yves D’AUBENTON-CARAFA, Rajani Kanth GUDIPATI, Richard ŠTEFL a Domenico LIBRI. In vivo SELEX reveals novel sequence and structural determinants of Nrd1-Nab3-Sen1 dependent transcription termination. EMBO Journal. NEW YORK: NATURE PUBLISHING GROUP, 2012, roč. 31, č. 19, s. 3935-3948. ISSN 0261-4189. Dostupné z: https://dx.doi.org/10.1038/emboj.2012.237.

BYSTRICKÝ, Peter, Marie POKORNÁ, Karel KUBÍČEK, Lukáš ŽÍDEK a Michaela WIMMEROVÁ. NMR STUDY - RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. In 2nd EAST NMR Young Investigator's meeting. 2012.

SUCHÁNKOVÁ, Tereza, Karel KUBÍČEK, Jana KAŠPÁRKOVÁ, Viktor BRABEC a Jiří KOZELKA. Platinum-DNA interstrand crosslinks: Molecular determinants of bending and unwinding of the double helix. Journal of Inorganic Biochemistry. New York, USA: Elsevier Science Inc, 2012, roč. 108, č. 1, s. 69-79. ISSN 0162-0134. Dostupné z: https://dx.doi.org/10.1016/j.jinorgbio.2011.09.025.

BYSTRICKÝ, Peter, Marie POKORNÁ, Karel KUBÍČEK, Michaela WIMMEROVÁ a Lukáš ŽÍDEK. RALSTONIA SOLANACEARUM LECTIN INTERACTIONS, A NMR STUDY. In 26th Intenational Carbohydrate Symposium 2012 abstracts. 2012.

ŠIKORSKÝ, Tomáš, Fruzsina HÓBOR, Eva KRIŽANOVÁ, Josef PASULKA, Karel KUBÍČEK a Richard ŠTEFL. Recognition of asymmetrically dimethylated arginine by TDRD3. Nucleic Acids Research. Oxford: Oxford University Press, 2012, roč. 40, č. 22, s. 11748-11755. ISSN 0305-1048. Dostupné z: https://dx.doi.org/10.1093/nar/gks929.

ŠTEFL, Richard a Vladimír SKLENÁŘ. RNA. In Ivano Pertini, Kathleen S. McGreevy, Giacomo Parigi. NMR of Biomolecules, Towards Mechanistic System Biology. 1. vyd. Weinheim, Německo: Wiley-Blackwell, 2012, s. 119-135. ISBN 978-3-527-32850-5.

KUBÍČEK, Karel, Hana ČERNÁ, Peter HOLUB, Josef PASULKA, Dominika HROŠŠOVÁ, Frank LOEHR, Ctirad HOFR, Štěpánka VAŇÁČOVÁ a Richard ŠTEFL. Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1. Genes & Development. New York: Cold Spring Harbor Laboratory Press, 2012, roč. 26, č. 17, s. 1891-1896. ISSN 0890-9369. Dostupné z: https://dx.doi.org/10.1101/gad.192781.112.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA a Michaela WIMMEROVÁ. NMR STUDY OF INTERACTIONS OF RALSTONIA SOLANACEARUM LECTIN. In XV. Setkání biochemiků a molekulárních biologů Sborník příspěvků. 2011. ISBN 978-80-210-5594-0.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA a Michaela WIMMEROVÁ. NMR STUDY OF RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. In EuroCarb 2011 abstracts. 2011.

BYSTRICKÝ, Peter, Karel KUBÍČEK, Marie POKORNÁ, Radovan FIALA a Michaela WIMMEROVÁ. NMR STUDY OF RALSTONIA SOLANACEARUM LECTIN INTERACTIONS. 2011. ISBN 978-80-86313-34-4.

HÓBOR, Fruzsina, Roberto PERGOLI, Karel KUBÍČEK, Dominika HROŠŠOVÁ, Veronika BAČÍKOVÁ, Michal ZIMMERMANN, Josef PASULKA, Ctirad HOFR, Štěpánka VAŇÁČOVÁ a Richard ŠTEFL. Recognition of transcription termination signal by the nuclear polyadenylated RNA-binding (Nab)3 protein. The Journal of Biological Chemistry. Am. Soc. for Biochem. and Mol. Biol., 2011, roč. 286, č. 5, s. 3645-3657. ISSN 0021-9258. Dostupné z: https://dx.doi.org/10.1074/jbc.M110.158774.

ŠMIŘÁKOVÁ, Eliška, Paride PAPADIA, Fabio ARNESANO, Giovanni NATILE, Karel KUBÍČEK a Jiří KOZELKA. Using NMR spectroscopy for improvement of cisplatin-based drugs. In Instruments and methods for biology and medicine 2011. 2011. ISBN 978-80-01-04915-0.

KUBÍČEK, Karel, Josef PASULKA, Hana ČERNÁ, Frank LÖHR a Richard ŠTEFL. 1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II. Biomolecular NMR Assignments. Netherlands: Springer Netherlands, 2011, roč. 5, č. 2, s. 203-205. ISSN 1874-2718. Dostupné z: https://dx.doi.org/10.1007/s12104-011-9300-y.

PASULKA, Josef, Jaroslav KOČA a Richard ŠTEFL. The computational view inside the dynamical behavior of the RNA-binding motive. In 8th Discussions in Structural Molecular Biology, Nove Hrady, March 18 - 20, 2010. 2010. ISSN 1211-5894.

ŠTEFL, Richard, Florian OBERSTRASS, Jeniffer HOOD, Muriel JOURDAN, Michal ZIMMERMANN, Lenka SKŘÍŠOVSKÁ, Christophe MARIS, Li PENG, Ctirad HOFR, Ronald EMESON a Frederic ALLAIN. The Solution Structure of the ADAR2 dsRBM-RNA Complex Reveals a Sequence-Specific Readout of the Minor Groove. CELL. UNITED STATES: CELL PRESS, 2010, roč. 143, č. 2, s. 225-237. ISSN 0092-8674.

PERGOLI, Roberto, Karel KUBÍČEK, Fruzsina HÓBOR, Josef PASULKA a Richard ŠTEFL. (1)H, (13)C, and (15)N chemical shift assignments for the RNA recognition motif of Nab3. Biomolecular NMR Assignments. UNITED STATES: SPRINGER, 2010, roč. 4, č. 1, s. 119-121. ISSN 1874-2718. Dostupné z: https://dx.doi.org/10.1007/s12104-010-9221-1.

SAŇUDO ARCE, Maria, Martin JACKO, Christiane RAMMELT, Štěpánka VAŇÁČOVÁ a Richard ŠTEFL. 1H, 13C, and 15N chemical shift assignments of ZCCHC9. Biomolecular NMR Assignments. SPRINGER, 2010, roč. 5, č. 1, s. 19-21. ISSN 1874-2718. Dostupné z: https://dx.doi.org/10.1007/s12104-010-9257-2.

ČERNÁ, Hana, Karel KUBÍČEK a Richard ŠTEFL. Recognition of phosphorylated CTD of RNA Pol II by Nrd1. In Recognition of phosphorylated CTD of RNA Pol II by Nrd1. 2009. ISSN 1211-5894.

HÓBOR, Fruzsina, Karel KUBÍČEK, Josef PASULKA a Richard ŠTEFL. Structure and RNA binding of Nab3. In Structure and RNA binding of Nab3. 2009. ISSN 1211-5894.

PASULKA, Josef, Jaroslav KOČA a Richard ŠTEFL. The molecular dynamics study of the RNA-binding domain of ADAR2 bound to dsRNA. In 7th Discussions in Structural Molecular Biology Nove Hrady, 12 - 14 March 2009. 2009. ISSN 1211-5894.

HÓBOR, Fruzsina, Hana ČERNÁ, Veronika BAČÍKOVÁ, Josef PASULKA, Karel KUBÍČEK a Richard ŠTEFL. Transcription termination of nonpolyadenylated transcripts. In Transcription termination of nonpolyadenylated transcripts. 2009. ISSN 1211-5894.

VAŇÁČOVÁ, Štěpánka a Richard ŠTEFL. The exosome and RNA quality control in the nucleus. EMBO REPORTS. Nature Publishing Group, London, UK: Nature Publishing Group, London, UK, 2007, roč. 8, č. 7, s. 651-657. ISSN 1469-221X.

SKRISOVSKA, Lenka, Cyril BOURGEOIS, Richard ŠTEFL, Sushma-Nagaraja GRELLSCHEID, Liliane KISTER, Philipp WENTER, David ELLIOTT, James STEVENIN a Frederic ALLAIN. The testis-specific human protein RBMY recognizes RNA through a novel mode of interaction. EMBO REPORTS. Nature Publishing Group, London, UK: Nature Publishing Group, London, UK, 2007, roč. 8, č. 4, s. 372–379. ISSN 1469-221X.