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HEJRET, Václav, Nandan Mysore VARADARAJAN, Eva KLIMENTOVÁ, Katarína GREŠOVÁ, Ilektra-Chara GIASSA, Štěpánka VAŇÁČOVÁ and Panagiotis ALEXIOU. Analysis of chimeric reads characterises the diverse targetome of AGO2-mediated regulation. Scientific Reports. Nature Research, 2023, vol. 13, No 1, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-023-49757-z.URL
RIV/00216224:14740/23:00133649 Article in a journal. English. Germany.
Hejret, Václav (203 Czech Republic, belonging to the institution) -- Varadarajan, Nandan Mysore (356 India, belonging to the institution) -- Klimentová, Eva (203 Czech Republic, belonging to the institution) -- Grešová, Katarína (703 Slovakia, belonging to the institution) -- Giassa, Ilektra-Chara (300 Greece, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Alexiou, Panagiotis (300 Greece, guarantor, belonging to the institution)
Keywords in English: Data processing; Machine learning; miRNAs
International impact: yes
Reviewed: yes
Changed by: Ing. Marie Švancarová, učo 251223. Changed: 25/10/2024 13:15. -
VAŇÁČOVÁ, Štěpánka and Šárka FAJTLOVÁ. EMBO workshop - Eukaryotic RNA turnover and viral biology. 2023.URL
RIV/00216224:14740/23:00133579 Organization of a conference. English. Czech Republic.
Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution) -- Fajtlová, Šárka (203 Czech Republic, belonging to the institution)
Keywords in English: viruses; structure; RNA interactions and modifications; translation and replication; virus infections; antiviral therapies; virus host interactions
International impact: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 5/3/2024 17:36. -
RODRIGUEZ-GALAN, Ana, Sara G DOSIL, Anna VLČKOVÁ, Lola FERNANDEZ-MESSINA, Zuzana FEKETOVÁ, Julie POKORNÁ, Irene FERNANDEZ-DELGADO, Emilio CAMAFEITA, Manuel Jose GOMEZ, Marta RAMIREZ-HUESCA, Cristina GUTIERREZ-VAZQUEZ, Fatima SANCHEZ-CABO, Jesus VAZQUEZ, Štěpánka VAŇÁČOVÁ and Francisco SANCHEZ-MADRID. ISG20L2: an RNA nuclease regulating T cell activation. Cellular and molecular life sciences. BASEL: BIRKHAUSER VERLAG AG, 2023, vol. 80, No 9, p. 1-19. ISSN 1420-682X. Available from: https://dx.doi.org/10.1007/s00018-023-04925-2.URL
RIV/00216224:14740/23:00133564 Article in a journal. English. Switzerland.
Vlčková, Anna (203 Czech Republic, belonging to the institution) -- Feketová, Zuzana (703 Slovakia, belonging to the institution) -- Pokorná, Julie (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Sanchez-Madrid, Francisco (guarantor)
Keywords in English: Exonuclease; T cell; Immunoregulatory
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 1/8/2024 13:50. -
FARIA ZENI, Pedro, Michaela MEDKOVÁ, K. TRACHTOVÁ, L. JANSKÁ, Václav ŠEDA, Eva HOFERKOVÁ, Nandan Mysore VARADARAJAN, Sonali SHARMA, Aleš OBRDLÍK, Štěpánka VAŇÁČOVÁ, A. MAIQUES-DIAZ, JI. MARTÍN-SUBERO and Marek MRÁZ. The role of long non-coding RNAs in BCR-mediated CLL activation. In CEITEC PhD Conference, Brno. 2023.URL
RIV/00216224:14740/23:00132967 Conference abstract. English. Czech Republic.
Faria Zeni, Pedro (76 Brazil, belonging to the institution) -- Medková, Michaela (203 Czech Republic, belonging to the institution) -- Šeda, Václav (203 Czech Republic, belonging to the institution) -- Hoferková, Eva (203 Czech Republic, belonging to the institution) -- Varadarajan, Nandan Mysore (356 India, belonging to the institution) -- Sharma, Sonali (356 India, belonging to the institution) -- Obrdlík, Aleš (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Mráz, Marek (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: B cell Receptor; chronic lymphocytic leukemia; BCR inhibitors; non-coding RNAs
Type of participation: active participation (giving a lecture, organization, etc.)
Reviewed: yes
Changed by: Mgr. Eva Dubská, učo 77638. Changed: 27/3/2024 00:14. -
CAVALLIN, Ivana, Marek BARTOŠOVIČ, Tomáš SKALICKÝ, Praveenkumar RENGARAJ, Martin DEMKO, Martina Christina SCHMIDT-DENGLER, Aleksej DRINO, Mark HELM and Štěpánka VAŇÁČOVÁ. HITS-CLIP analysis of human ALKBH8 reveals interactions with fully processed substrate tRNAs and with specific noncoding RNAs. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 12, p. 1568-1581. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079421.122.URL
RIV/00216224:14740/22:00128510 Article in a journal. English. United States of America.
Cavallin, Ivana (203 Czech Republic, belonging to the institution) -- Bartošovič, Marek (703 Slovakia, belonging to the institution) -- Skalický, Tomáš (203 Czech Republic, belonging to the institution) -- Rengaraj, Praveenkumar (356 India, belonging to the institution) -- Demko, Martin (703 Slovakia, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: ALKBH8; Trm9; wobble uridine modification; mcm(5)U; mcm(5)s(2)U; HITS-CLIP
International impact: yes
Reviewed: yes
Changed by: Ing. Marie Švancarová, učo 251223. Changed: 25/10/2024 12:23. -
HEJRET, Václav, Nandan Mysore VARADARAJAN, Eva KLIMENTOVÁ, Ilektra-Chara GIASSA, Štěpánka VAŇÁČOVÁ and Panagiotis ALEXIOU. Noncanonical small RNA chimeras identified by AGO2-CLASH. In 16th Microsymposium on RNA Biology. 2022.
Name (in English): Noncanonical small RNA chimeras identified by AGO2-CLASH
English. Czech Republic.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Václav Hejret, učo 408320. Changed: 21/9/2022 16:02. -
MARTINO, Fabiana, Nandan Mysore VARADARAJAN, Ana Rubina PERESTRELO, Václav HEJRET, Helena DURIKOVA, Dragana VUKIĆ, Vladimir HORVATH, Francesca CAVALIERI, Frank CARUSO, Waleed S ALBIHLAL, Andre P GERBER, Mary Anne O'CONNELL, Štěpánka VAŇÁČOVÁ, Stefania PAGLIARI and Giancarlo FORTE. The mechanical regulation of RNA binding protein hnRNPC in the failing heart. Science Translational Medicine. Washington: American Association for the Advancement of Science, 2022, vol. 14, No 672, p. 1-17. ISSN 1946-6234. Available from: https://dx.doi.org/10.1126/scitranslmed.abo5715.URL
RIV/00216224:14740/22:00128822 Article in a journal. English. United States of America.
Martino, Fabiana (380 Italy, belonging to the institution) -- Varadarajan, Nandan Mysore (356 India, belonging to the institution) -- Hejret, Václav (203 Czech Republic, belonging to the institution) -- Vukić, Dragana (688 Serbia, belonging to the institution) -- O'Connell, Mary Anne (372 Ireland, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Extracellular Matrix; Heart Failure; Heterogeneous-Nuclear Ribonucleoprotein Group C; Humans
International impact: yes
Reviewed: yes
Changed by: Ing. Marie Švancarová, učo 251223. Changed: 31/10/2024 11:59. -
MAROOFIAN, Reza, Jiří SEDMÍK, Neda MAZAHERI, Marcello SCALA, Maha S. ZAKI, Liam KEEGAN, Reza AZIZIMALAMIRI, Mahmoud ISSA, Gholamreza SHARIATI, Alireza SEDAGHAT, Christian BEETZ, Peter BAUER, Hamid GALEHDARI, Mary Anne O'CONNELL and Henry HOULDEN. Biallelic variants in ADARB1, encoding a dsRNA-specific adenosine deaminase, cause a severe developmental and epileptic encephalopathy. Journal of Medical Genetics. London (UK): BMJ Publishing Group, 2021, vol. 58, No 7, p. 495-504. ISSN 0022-2593. Available from: https://dx.doi.org/10.1136/jmedgenet-2020-107048.URL
RIV/00216224:14740/21:00118751 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Sedmík, Jiří (203 Czech Republic, belonging to the institution) -- Keegan, Liam (372 Ireland, belonging to the institution) -- O'Connell, Mary Anne (372 Ireland, guarantor, belonging to the institution)
Keywords in English: epilepsymutationmissenseDNAsequence analysisnervous system diseases
International impact: yes
Reviewed: yes
Changed by: Mgr. Adéla Pešková, učo 143895. Changed: 9/10/2024 13:00. -
FEDOROVÁ, Veronika, Tereza VÁŇOVÁ, Veronika POSPÍŠILOVÁ, Jan RAŠKA, Jiří SEDMÍK, Simona VOCHYÁNOVÁ, Hana HŘÍBKOVÁ and Dáša BOHAČIAKOVÁ. Glioblastom a cerebrální organoidy: zavedení a analýza in vitro modelu. In XXIV. Biologické dny 2021, Brno, 6.-7. 9. 2021. 2021.
Name in Czech: Glioblastom a cerebrální organoidy: zavedení a analýza in vitro modelu.
Changed by: Ing. Nicole Ludikovská, učo 358847. Changed: 17/2/2022 11:24. -
RENGARAJ, Praveenkumar, Aleš OBRDLÍK, Dragana VUKIĆ, Nandan Mysore VARADARAJAN, Liam KEEGAN, Štěpánka VAŇÁČOVÁ and Mary Anne O'CONNELL. Interplays of different types of epitranscriptomic mRNA modifications. RNA Biology. Philadelphia: Taylor & Francis Inc, 2021, vol. 18, S1, p. 19-30. ISSN 1547-6286. Available from: https://dx.doi.org/10.1080/15476286.2021.1969113.URL
RIV/00216224:14740/21:00124288 Article in a journal. English. United States of America.
Rengaraj, Praveenkumar (356 India, belonging to the institution) -- Obrdlík, Aleš (276 Germany, belonging to the institution) -- Vukić, Dragana (688 Serbia, belonging to the institution) -- Varadarajan, Nandan Mysore (356 India, belonging to the institution) -- Keegan, Liam (372 Ireland, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- O'Connell, Mary Anne (372 Ireland, guarantor, belonging to the institution)
Keywords in English: Inosine; m(6)A; m(6)A(m); m(5)C; m(1)A; pseudouridine; epitranscriptome; ADAR
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 25/2/2022 10:43. -
URL
Name in Czech: Open Week
Name (in English): Open Week
RIV/00216224:14740/21:00124525 Popularizing texts and activities. Czech. Czech Republic.
Fajtlová, Šárka (203 Czech Republic, belonging to the institution) -- Rektor, Ivan (203 Czech Republic, belonging to the institution) -- Šmída, Michal (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution)
Keywords in English: online; lectures; discussion; open week
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 12/4/2022 15:15. -
COVELO MOLARES, Helena, Aleš OBRDLÍK, I. POSTULKOVA, Michaela DOHNÁLKOVÁ, Pavlína GREGOROVÁ, Sri Ranjani GANJI, David POTĚŠIL, L. GAWRIYSKI, M. VARJOSALO and Štěpánka VAŇÁČOVÁ. The comprehensive interactomes of human adenosine RNA methyltransferases and demethylases reveal distinct functional and regulatory features. Nucleic acids research. Oxford: Oxford University Press, 2021, vol. 49, No 19, p. 10895-10910. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkab900.URL
RIV/00216224:14740/21:00119659 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Covelo Molares, Helena (724 Spain, belonging to the institution) -- Obrdlík, Aleš (276 Germany, belonging to the institution) -- Dohnálková, Michaela (203 Czech Republic, belonging to the institution) -- Gregorová, Pavlína (703 Slovakia, belonging to the institution) -- Ganji, Sri Ranjani (356 India, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: PRE-MESSENGER-RNA; SINGLE-STRANDED-DNA; POLYMERASE-II; NUCLEAR-RNA; M(6)A METHYLTRANSFERASE; GENE-EXPRESSION; 7SK SNRNP; P-TEFB; METHYLATION; PROTEIN
International impact: yes
Reviewed: yes
Changed by: Ing. Martina Blahová, učo 371476. Changed: 2/11/2024 20:47. -
ROITHOVA, A., Zuzana FEKETOVÁ, Štěpánka VAŇÁČOVÁ and D. STANEK. DIS3L2 and LSm proteins are involved in the surveillance of Sm ring-deficient snRNAs. Nucleic acids research. Oxford: Oxford University Press, 2020, vol. 48, No 11, p. 6184-6197. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkaa301.URL
RIV/00216224:14740/20:00114751 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Feketová, Zuzana (703 Slovakia, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: MESSENGER-RNA; DEGRADATION PATHWAY; NONCODING RNAS; TRANSLATION FACTORS; STRUCTURAL BASIS; TRUNCATED FORMS; QUALITY-CONTROL; CAJAL BODIES; CORE DOMAIN; COMPLEX
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 26/2/2021 12:30. -
SINIGAGLIA, Ketty, Janka MELICHEROVÁ, Stanislav STEJSKAL, Liam KEEGAN and Mary Anne O'CONNELL. Elucidating the Biological Role of ADAR1 in the Innate immunity Response. In CEITEC PhD Conference. 2020.URL
RIV/00216224:14740/20:00118412 Conference abstract. English. Czech Republic.
Sinigaglia, Ketty (380 Italy, belonging to the institution) -- Melicherová, Janka (703 Slovakia, belonging to the institution) -- Stejskal, Stanislav (203 Czech Republic, belonging to the institution) -- Keegan, Liam (372 Ireland, belonging to the institution) -- O'Connell, Mary Anne (372 Ireland, belonging to the institution)
Keywords in English: ADAR1
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 17/3/2021 14:55. -
YADAV, Deepak Kumar, Dagmar ZIGÁČKOVÁ, Maria ZLOBINA, Tomáš KLUMPLER, Christelle BEAUMONT, Monika KUBÍČKOVÁ, Štěpánka VAŇÁČOVÁ and Peter LUKAVSKY. Staufen1 reads out structure and sequence features in ARF1 dsRNA for target recognition. Nucleic acids research. Oxford: Oxford University Press, 2020, vol. 48, No 4, p. 2091-2106. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz1163.URL
RIV/00216224:14740/20:00114622 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Yadav, Deepak Kumar (356 India, belonging to the institution) -- Zigáčková, Dagmar (203 Czech Republic, belonging to the institution) -- Zlobina, Maria (643 Russian Federation, belonging to the institution) -- Klumpler, Tomáš (203 Czech Republic, belonging to the institution) -- Beaumont, Christelle (250 France, belonging to the institution) -- Kubíčková, Monika (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution) -- Lukavsky, Peter (40 Austria, belonging to the institution)
Keywords in English: DOUBLE-STRANDED-RNA; NMR STRUCTURE DETERMINATION; LARGE-SCALE PREPARATION; BICOID MESSENGER-RNA; SECONDARY STRUCTURES; BINDING PROTEIN; DOMAIN; PURIFICATION; NOESY; LOCALIZATION
International impact: yes
Reviewed: yes
Changed by: Ing. Martina Blahová, učo 371476. Changed: 27/10/2024 15:12. -
YADAV, Deepak Kumar, Dagmar ZIGÁČKOVÁ, Maria ZLOBINA, Tomáš KLUMPLER, Christelle BEAUMONT, Monika KUBÍČKOVÁ, Štěpánka VAŇÁČOVÁ and Peter LUKAVSKY. Staufen1 reads out structure and sequence features in ARF1 dsRNA for target recognition. In FEBS Congress 2019. 2019. ISSN 2211-5463.URL
RIV/00216224:14740/19:00108212 Conference abstract. English. United States of America.
Yadav, Deepak Kumar (356 India, belonging to the institution) -- Zigáčková, Dagmar (203 Czech Republic, belonging to the institution) -- Zlobina, Maria (643 Russian Federation, belonging to the institution) -- Klumpler, Tomáš (203 Czech Republic, belonging to the institution) -- Beaumont, Christelle (250 France, belonging to the institution) -- Kubíčková, Monika (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Lukavsky, Peter (40 Austria, guarantor, belonging to the institution)
Keywords in English: Staufen1; ARF1 dsRNA
International impact: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 30/3/2020 14:19. -
RÁJECKÁ, Veronika, Tomáš SKALICKÝ and Štěpánka VAŇÁČOVÁ. The role of RNA adenosine demethylases in the control of gene expression. Biochimica et biophysica acta - Gene regulatory mechanisms. Amsterdam: Elsevier, 2019, vol. 1862, No 3, p. 343-355. ISSN 1874-9399. Available from: https://dx.doi.org/10.1016/j.bbagrm.2018.12.001.URL
RIV/00216224:14740/19:00109891 Article in a journal. English. Netherlands.
Rájecká, Veronika (203 Czech Republic, belonging to the institution) -- Skalický, Tomáš (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: m(6)A; m(6)A(m); RNA demethylase; FTO; ALKBH5; RNA modification
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 4/3/2020 14:41. -
Naturally occurring quaternary benzo[c]phenanthridine alkaloids selectively stabilize G-quadruplexesJAROŠOVÁ, Petra, Petr PAROULEK, Michal RÁJECKÝ, Veronika RÁJECKÁ, Eva TÁBORSKÁ, R. ERITJA, A. AVINO, S. MAZZINI, R. GARGALLO and Petr TÁBORSKÝ. Naturally occurring quaternary benzo[c]phenanthridine alkaloids selectively stabilize G-quadruplexes. Physical Chemistry Chemical Physics. CAMBRIDGE: Royal Society of Chemistry, 2018, vol. 20, No 33, p. 21772-21782. ISSN 1463-9076. Available from: https://dx.doi.org/10.1039/c8cp02681e.URL
RIV/00216224:14310/18:00103741 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Jarošová, Petra (203 Czech Republic, belonging to the institution) -- Paroulek, Petr (203 Czech Republic, belonging to the institution) -- Rájecký, Michal (203 Czech Republic, belonging to the institution) -- Rájecká, Veronika (203 Czech Republic, belonging to the institution) -- Táborská, Eva (203 Czech Republic, belonging to the institution) -- Eritja, R. (724 Spain) -- Avino, A. (724 Spain) -- Mazzini, S. (380 Italy) -- Gargallo, R. (724 Spain) -- Táborský, Petr (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: HUMAN TELOMERIC DNA; ANTIPROLIFERATIVE ACTIVITY; PROMOTER REGION; SMALL MOLECULES; DRUG DESIGN; K+ SOLUTION; IN-VIVO; BINDING; BENZOPHENANTHRIDINE; OLIGONUCLEOTIDES
International impact: yes
Reviewed: yes
Changed by: Mgr. Michal Petr, učo 65024. Changed: 23/4/2024 12:29. -
JANTSCH, M.F., A. QUATTRONE, Mary Anne O'CONNELL, M. HELM, M. FRYE, M. MACIAS-GONZALES, M. OHMAN, S. AMERES, L. WILLEMS, F. FUKS, A. OULAS, Štěpánka VAŇÁČOVÁ, H. NIELSEN, C. BOUSQUET-ANTONELLI, Y. MOTORIN, J.Y. ROIGNANT, N. BALATSOS, A. DINNYES, P. BARANOV, V. KELLY, A. LAMM, G. RECHAVI, M. PELIZZOLA, J. LIEPINS, I.H. KHOLODNYUK, V. ZAMMIT, D. AYERS, F. DRABLOS, J.A. DAHL, J. BUJNICKI, C. JERONIMO, R. ALMEIDA, M. NEAGU, M. COSTACHE, J. BANKOVIC, B. BANOVIC, J. KYSELOVIC, L.M. VALOR, S. SELBERT, P. PIR, T. DEMIRCAN, V. COWLING, M. SCHAFER, W. ROSSMANITH, D. LAFONTAINE, A. DAVID, C. CARRE, F. LYKO, R. SCHAFFRATH, S. SCHWARTZ, A. VERDEL, A. KLUNGLAND, E. PURTA, G. TIMOTIJEVIC, F. CARDONA, A. DAVALOS, E. BALLANA, D. O CARROLL, J. ULE and R. FRAY. Positioning Europe for the EPITRANSCRIPTOMICS challenge. RNA BIOLOGY. PHILADELPHIA: TAYLOR & FRANCIS INC, 2018, vol. 15, No 6, p. 829-831. ISSN 1547-6286. Available from: https://dx.doi.org/10.1080/15476286.2018.1460996.URL
English. United States of America.
Keywords in English: database of Modification; detection of RNA modification; epitranscriptomics; European funding; model systems
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 22/3/2019 14:46. -
COVELO MOLARES, Helena, Marek BARTOŠOVIČ and Štěpánka VAŇÁČOVÁ. RNA methylation in nuclear pre-mRNA processing. Wiley Interdisciplinary Reviews: RNA. Hoboken, USA: WILEY-BLACKWELL, 2018, vol. 9, No 6, p. 1489-1505. ISSN 1757-7004. Available from: https://dx.doi.org/10.1002/wrna.1489.URL
RIV/00216224:14740/18:00101444 Article in a journal. English. United States of America.
Covelo Molares, Helena (724 Spain, belonging to the institution) -- Bartošovič, Marek (703 Slovakia, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA demethylase; RNA methylase; RNA processing
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 16:51. -
VAŇÁČOVÁ, Štěpánka. Summer course on RNA protein interaction. 2018.URL
RIV/00216224:14740/18:00106833 Organization of a workshop. English. Czech Republic.
Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA biophysical and functional properties; RNA protein interaction
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 23/4/2019 10:31. -
SOVÁKOVÁ, Pavla, Alžbeta MAGDOLENOVÁ, Klára KONEČNÁ, Veronika RÁJECKÁ, Jiří FAJKUS and Miloslava FOJTOVÁ. Telomere elongation upon transfer to callus culture reflects the reprogramming of telomere stability control in Arabidopsis. Plant Molecular Biology. Kluwer Academic Publishers, 2018, vol. 98, 1-2, p. 81-99. ISSN 0167-4412. Available from: https://dx.doi.org/10.1007/s11103-018-0765-2.URL
RIV/00216224:14310/18:00101539 Article in a journal. English. Netherlands.
Sováková, Pavla (203 Czech Republic, belonging to the institution) -- Magdolenová, Alžbeta (703 Slovakia, belonging to the institution) -- Konečná, Klára (203 Czech Republic, belonging to the institution) -- Rájecká, Veronika (203 Czech Republic, belonging to the institution) -- Fajkus, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Fojtová, Miloslava (203 Czech Republic, belonging to the institution)
Keywords in English: Arabidopsis thaliana; Callus; Chromosome stability; Epigenetics; Regenerated plants; Telomere
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 9/6/2022 11:30. -
ZIGÁČKOVÁ, Dagmar and Štěpánka VAŇÁČOVÁ. The role of 3 ' end uridylation in RNA metabolism and cellular physiology. PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. LONDON: ROYAL SOC, 2018, vol. 373, No 1762, p. 20180171-20180184. ISSN 0962-8436. Available from: https://dx.doi.org/10.1098/rstb.2018.0171.URL
RIV/00216224:14740/18:00101443 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Zigáčková, Dagmar (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA uridylation; tutase; RNA modification; RNA surveillance; RNA processing; RNA degradation
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 13/3/2019 17:13. -
SKALICKÝ, Tomáš, E. DOBAKOVA, R.J. WHEELER, M. TESAROVA, P. FLEGONTOV, D. JIRSOVA, J. VOTYPKA, V. YURCHENKO, F.J. AYALA and J. LUKES. Extensive flagellar remodeling during the complex life cycle of Paratrypanosoma, an early-branching trypanosomatid. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: National Academy of Sciences, 2017, vol. 114, No 44, p. 11757-11762. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1712311114.URL
RIV/00216224:14740/17:00100392 Article in a journal. English. United States of America.
Skalický, Tomáš (203 Czech Republic, guarantor, belonging to the institution) -- Dobakova, E. (203 Czech Republic) -- Wheeler, R.J. (826 United Kingdom of Great Britain and Northern Ireland) -- Tesarova, M. (203 Czech Republic) -- Flegontov, P. (203 Czech Republic) -- Jirsova, D. (56 Belgium) -- Votypka, J. (203 Czech Republic) -- Yurchenko, V. (203 Czech Republic) -- Ayala, F.J. (840 United States of America) -- Lukes, J. (203 Czech Republic)
Keywords in English: trypanosomatid; evolution; flagellar remodeling; haptomonads; cytostome
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 16/3/2018 10:42. -
BARTOŠOVIČ, Marek, Helena COVELO MOLARES, Pavlína GREGOROVÁ, Dominika HROŠŠOVÁ, G. KUDLA and Štěpánka VAŇÁČOVÁ. N6-methyladenosine demethylase FTO targets pre-mRNAs and regulates alternative splicing and 3'-end processing. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 19, p. 11356-11370. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkx778.URL
RIV/00216224:14740/17:00095526 Article in a journal. English. United Kingdom of Great Britain and Northern Ireland.
Bartošovič, Marek (703 Slovakia, belonging to the institution) -- Covelo Molares, Helena (724 Spain, belonging to the institution) -- Gregorová, Pavlína (703 Slovakia, belonging to the institution) -- Hroššová, Dominika (703 Slovakia, belonging to the institution) -- Kudla, G. (826 United Kingdom of Great Britain and Northern Ireland) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: EMBRYONIC STEM-CELLS; BLOCKED 5' TERMINI; SEX DETERMINATION; COMPREHENSIVE ANALYSIS; NUCLEAR-RNA; METHYLATION; DROSOPHILA; REVEALS; OBESITY; N-6-METHYLADENOSINE
International impact: yes
Reviewed: yes
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 28/2/2018 09:11. -
KUČERA, Jiří, Ondrej ŠEDO, David POTĚŠIL, Oldřich JANICZEK, Zbyněk ZDRÁHAL and Martin MANDL. Comparative proteomic analysis of sulfur-oxidizing Acidithiobacillus ferrooxidans CCM 4253 cultures having lost the ability to couple anaerobic elemental sulfur oxidation with ferric iron reduction. Research in Microbiology. Amsterdam: Elsevier Science, 2016, vol. 167, No 7, p. 587-594. ISSN 0923-2508. Available from: https://dx.doi.org/10.1016/j.resmic.2016.06.009.
Name in Czech: Srovnávací proteomická analýza sirných kultur Acidithiobacillus ferrooxidans CCM 4253, které ztratily schopnost propojit anaerobní oxidaci elementární síry s redukcí železa(III)
Name (in English): Comparative proteomic analysis of sulfur-oxidizing Acidithiobacillus ferrooxidans CCM 4253 cultures having lost the ability to couple anaerobic elemental sulfur oxidation with ferric iron reduction
RIV/00216224:14310/16:00088101 Article in a journal. Biochemistry. English. Netherlands.
Kučera, Jiří (203 Czech Republic, belonging to the institution) -- Šedo, Ondrej (203 Czech Republic) -- Potěšil, David (203 Czech Republic) -- Janiczek, Oldřich (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic) -- Mandl, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Acidithiobacillus ferrooxidans; Anaerobic respiratory pathway; Sulfur metabolism; Ferric iron reduction; Proteomics
International impact: yes
Reviewed: yes
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 26/4/2017 22:13. -
ŠKORPÍKOVÁ, Lucie, Jana ILGOVÁ, David POTĚŠIL, Zbyněk ZDRÁHAL, Martin DEMKO, Jan OPPELT, Milan GELNAR and Martin KAŠNÝ. Deep insight into secretome and transcriptome of Trichinella spiralis and Trichinela pseudospiralis. In EMOP XII – the 12th European Multicolloquium of Parasitology. 2016.URL
Name in Czech: Detailní pohled na sekretom a transkriptom Trichinella spiralis a Trichinela pseudospiralis
Name (in English): Deep insight into secretome and transcriptome of Trichinella spiralis and Trichinela pseudospiralis
RIV/00216224:14310/16:00090454 Requested lectures. Zoology. English. Czech Republic.
Škorpíková, Lucie (203 Czech Republic, belonging to the institution) -- Ilgová, Jana (703 Slovakia) -- Potěšil, David (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic) -- Demko, Martin (703 Slovakia) -- Oppelt, Jan (203 Czech Republic) -- Gelnar, Milan (203 Czech Republic) -- Kašný, Martin (203 Czech Republic)
Keywords in English: Eudiplozoon; serpin
International impact: yes
Changed by: RNDr. Martin Kašný, Ph.D., učo 11259. Changed: 24/3/2017 22:32. -
ČERVENKA, Igor, Jana VALNOHOVÁ, Ondřej BERNATÍK, Jakub HARNOŠ, Matěj RÁDSETOULAL, Kateřina ŠEDOVÁ, Kateřina HANÁKOVÁ, David POTĚŠIL, Miroslava SEDLÁČKOVÁ, Alena SALAŠOVÁ, Zachary STEINHART, Stephane ANGERS, Gunnar SCHULTE, Aleš HAMPL, Zbyněk ZDRÁHAL and Vítězslav BRYJA. Dishevelled is a NEK2 kinase substrate controlling dynamics of centrosomal linker proteins. Proceedings of the National Academy of Sciences of the United States of America. Washington: National Academy of Sciences, 2016, vol. 113, No 33, p. 9304-9309. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1608783113.
RIV/00216224:14310/16:00088644 Article in a journal. Genetics and molecular biology. English. United States of America.
Červenka, Igor (703 Slovakia, belonging to the institution) -- Valnohová, Jana (203 Czech Republic, belonging to the institution) -- Bernatík, Ondřej (203 Czech Republic, belonging to the institution) -- Harnoš, Jakub (203 Czech Republic, belonging to the institution) -- Rádsetoulal, Matěj (203 Czech Republic, belonging to the institution) -- Šedová, Kateřina (203 Czech Republic, belonging to the institution) -- Hanáková, Kateřina (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Sedláčková, Miroslava (203 Czech Republic, belonging to the institution) -- Salašová, Alena (203 Czech Republic, belonging to the institution) -- Steinhart, Zachary (124 Canada) -- Angers, Stephane (124 Canada) -- Schulte, Gunnar (276 Germany, belonging to the institution) -- Hampl, Aleš (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Bryja, Vítězslav (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Wnt signaling; centrosome; Dishevelled; NEK2; linker proteins
International impact: yes
Reviewed: yes
Changed by: Mgr. Lucie Jarošová, DiS., učo 205746. Changed: 13/3/2018 15:33. -
BREZOVSKÝ, Jan, Petra BABKOVÁ, Oksana DEGTJARIK, Andrea FOŘTOVÁ, Artur Wiktor GÓRA, L. IERMAK, Petra ŘEZÁČOVÁ, Pavel DVOŘÁK, Ivana KUTÁ-SMATANOVÁ, Zbyněk PROKOP, Radka CHALOUPKOVÁ and Jiří DAMBORSKÝ. Engineering a de Novo Transport Tunnel. ACS Catalysis. WASHINGTON: AMER CHEMICAL SOC, 2016, vol. 6, No 11, p. 7597-7610. ISSN 2155-5435. Available from: https://dx.doi.org/10.1021/acscatal.6b02081.URL
RIV/00216224:14310/16:00088545 Article in a journal. Biochemistry. English. United States of America.
Brezovský, Jan (203 Czech Republic, belonging to the institution) -- Babková, Petra (203 Czech Republic, belonging to the institution) -- Degtjarik, Oksana (112 Belarus) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Góra, Artur Wiktor (616 Poland, belonging to the institution) -- Iermak, L. (804 Ukraine) -- Řezáčová, Petra (203 Czech Republic) -- Dvořák, Pavel (203 Czech Republic, belonging to the institution) -- Kutá-Smatanová, Ivana (203 Czech Republic) -- Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: transport tunnel; protein engineering; protein design; activity; specificity; substrate inhibition; stability; substrate binding; product release; water dynamics
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 5/4/2017 13:35. -
ROUDNICKÝ, Pavel, Jiří VOREL, Jana ILGOVÁ, Libor MIKEŠ, Lucie JEDLIČKOVÁ, John DALTON, Jan DVOŘÁK, Zbyněk ZDRÁHAL, David POTĚŠIL, Lubomír JANDA, Adam NOREK, Milan GELNAR and Martin KAŠNÝ. Eudiplozoon nipponicum (Heteronchoinea: Diplozoidae): insight into composition of E/S products and basic characterization of serpin. 2016. ISBN 978-80-210-8373-8.
RIV/00216224:14310/16:00088448 Presentations at conferences. Zoology. English. Czech Republic.
Roudnický, Pavel (203 Czech Republic, guarantor, belonging to the institution) -- Vorel, Jiří (203 Czech Republic) -- Ilgová, Jana (703 Slovakia) -- Mikeš, Libor (203 Czech Republic) -- Jedličková, Lucie (203 Czech Republic) -- Dalton, John (372 Ireland) -- Dvořák, Jan (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic) -- Potěšil, David (203 Czech Republic) -- Janda, Lubomír (203 Czech Republic) -- Norek, Adam (203 Czech Republic) -- Gelnar, Milan (203 Czech Republic) -- Kašný, Martin (203 Czech Republic)
Keywords in English: Monogenea; Eudiplozoon; nipponicum; serpin; excretory; secretory;
Changed by: RNDr. Martin Kašný, Ph.D., učo 11259. Changed: 24/3/2017 22:28. -
VERLANDE, Amandine, David POTĚŠIL, Zbyněk ZDRÁHAL, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, Karel SOUČEK, Jan TRNKA, W KOLCH and M ELKALAF. KSR proteins link metabolic changes to the MAPK/ERK pathway. In EACR 24: from basic research to precision medicine, Central Convention Complex, Manchester, UK, July 9-12, 2016, poster presentation. 2016.
Name (in English): KSR proteins link metabolic changes to the MAPK/ERK pathway
Genetics and molecular biology. English. Czech Republic.
Changed by: Mgr. Martina Vráblíková, učo 10839. Changed: 18/12/2017 11:10. -
JEDLIČKOVÁ, Lucie, Hana DVOŘÁKOVÁ, Martin KAŠNÝ, Jana ILGOVÁ, David POTĚŠIL, Zbyněk ZDRÁHAL and Libor MIKEŠ. Major acid endopeptidases of the blood-feeding monogenean Eudiplozoon nipponicum (Heteronchoinea: Diplozoidae). Parasitology. NEW YORK: CAMBRIDGE UNIV PRESS, 2016, vol. 143, No 4, p. 494-506. ISSN 0031-1820. Available from: https://dx.doi.org/10.1017/S0031182015001808.URL
RIV/00216224:14740/16:00087768 Article in a journal. Zoology. English. United States of America.
Jedličková, Lucie (203 Czech Republic) -- Dvořáková, Hana (203 Czech Republic) -- Kašný, Martin (203 Czech Republic, guarantor, belonging to the institution) -- Ilgová, Jana (703 Slovakia, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Mikeš, Libor (203 Czech Republic)
Keywords in English: cysteine peptidase; aspartic peptidase; protease; haematophagous monogenea; cathepsin L; cathepsin B; cathepsin D; fish parasite; common carp
Changed by: Mgr. Lucie Jarošová, DiS., učo 205746. Changed: 5/3/2018 14:31. -
SAID, Hafidh, David POTĚŠIL, Jan FÍLA, Věra ČAPKOVÁ, Zbyněk ZDRÁHAL and David HONYS. Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization. Genome Biology. London: BIOMED CENTRAL LTD, 2016, vol. 17, May, p. nestránkováno, 29 pp. ISSN 1465-6906. Available from: https://dx.doi.org/10.1186/s13059-016-0928-x.URL
Name (in English): Quantitative proteomics of the tobacco pollen tube secretome identifies novel pollen tube guidance proteins important for fertilization
RIV/00216224:14740/16:00088078 Article in a journal. Botany. English. United Kingdom of Great Britain and Northern Ireland.
Said, Hafidh (203 Czech Republic) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Fíla, Jan (203 Czech Republic) -- Čapková, Věra (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution) -- Honys, David (203 Czech Republic)
Keywords in English: Protein secretion; Pollen tube guidance; Cell-cell signaling; Double fertilization
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 14/3/2017 16:43. -
USTIANENKO, Dmytro, Josef PASULKA, Zuzana FEKETOVÁ, Lukáš BEDNAŘÍK, Dagmar ZIGÁČKOVÁ, Andrea FOŘTOVÁ, Mihaela ZAVOLAN and Štěpánka VAŇÁČOVÁ. TUT-DIS3L2 is a mammalian surveillance pathway for aberrant structured non-coding RNAs. EMBO JOURNAL. Hoboken: Wiley-Blackwell, 2016, vol. 35, No 20, p. 2179-2191. ISSN 0261-4189. Available from: https://dx.doi.org/10.15252/embj.201694857.URL
RIV/00216224:14740/16:00088170 Article in a journal. Biochemistry. English. United States of America.
Ustianenko, Dmytro (804 Ukraine, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Feketová, Zuzana (703 Slovakia, belonging to the institution) -- Bednařík, Lukáš (203 Czech Republic, belonging to the institution) -- Zigáčková, Dagmar (203 Czech Republic, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Zavolan, Mihaela (756 Switzerland) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: DIS3L2; RNA surveillance; TSSa; ncRNAs; uridylation
Changed by: Mgr. Eva Špillingová, učo 110713. Changed: 22/2/2017 13:52. -
LATTOVÁ, Erika, Adéla BRABCOVÁ, Veronika BÁRTOVÁ, David POTĚŠIL, Jan BÁRTA and Zbyněk ZDRÁHAL. N-Glycome Profiling of Patatins from Different Potato Species of Solanum Genus. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY. Washington D.C.: American Chemical Society, 2015, vol. 63, No 12, p. 3243-3250. ISSN 0021-8561. Available from: https://dx.doi.org/10.1021/acs.jafc.5b00426.Full Text
Name (in English): N-Glycome Profiling of Patatins from Different Potato Species of Solanum Genus
RIV/00216224:14740/15:00082929 Article in a journal. Biochemistry. English. United States of America.
Lattová, Erika (703 Slovakia, belonging to the institution) -- Brabcová, Adéla (203 Czech Republic) -- Bártová, Veronika (203 Czech Republic) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Bárta, Jan (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: glycans; mass speetrometry; patatin; plants; potato; Solanum
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 20/1/2020 16:42. -
PERNIKÁŘOVÁ, Vendula, Vojtěch SEDLÁČEK, David POTĚŠIL, Iva PROCHÁZKOVÁ, Zbyněk ZDRÁHAL, Pavel BOUCHAL and Igor KUČERA. Proteome-wide dataset generated by iTRAQ-3DLCMS/MS technique for studying the role of FerB protein in oxidative stress in Paracoccus denitrificans. Data in Brief. Amsterdam: Elsevier, 2015, vol. 4, September, p. 390-394. ISSN 2352-3409. Available from: https://dx.doi.org/10.1016/j.dib.2015.06.015.
RIV/00216224:14310/15:00080961 Article in a journal. Biochemistry. English. Netherlands.
Pernikářová, Vendula (203 Czech Republic, belonging to the institution) -- Sedláček, Vojtěch (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Procházková, Iva (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Bouchal, Pavel (203 Czech Republic, belonging to the institution) -- Kučera, Igor (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Paracoccus denitrificans; 3DLC proteomics; FerB; iTRAQ; Microbial proteomics
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Igor Kučera, DrSc., učo 911. Changed: 20/7/2019 14:20. -
PERNIKÁŘOVÁ, Vendula, Vojtěch SEDLÁČEK, David POTĚŠIL, Iva PROCHÁZKOVÁ, Zbyněk ZDRÁHAL, Pavel BOUCHAL and Igor KUČERA. Proteomic responses to a methyl viologen-induced oxidative stress in the wild type and FerB mutant strains of Paracoccus denitrificans. Journal of Proteomics. Amsterdam: ELSEVIER SCIENCE BV, 2015, vol. 125, July, p. 68-75. ISSN 1874-3919. Available from: https://dx.doi.org/10.1016/j.jprot.2015.05.002.URL
Name in Czech: Proteomická odezva na oxidační stres vyvolaný methylviologenem u divokého a FerB-mutentního kmene Paracoccus denitrificans
RIV/00216224:14310/15:00080836 Article in a journal. Biochemistry. English. Netherlands.
Pernikářová, Vendula (203 Czech Republic, belonging to the institution) -- Sedláček, Vojtěch (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Procházková, Iva (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Bouchal, Pavel (203 Czech Republic, belonging to the institution) -- Kučera, Igor (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Paracoccus denitrificans; methyl viologen; oxidative stress; flavoprotein; flavin reductase; microbial proteomics
International impact: yes
Reviewed: yes
Changed by: prof. RNDr. Igor Kučera, DrSc., učo 911. Changed: 20/7/2019 14:21. -
FAKTOR, Jakub, Lucia KNOPFOVÁ, David POTĚŠIL, Petr BENEŠ, Jan ŠMARDA, Bořivoj VOJTĚŠEK and Pavel BOUCHAL. Proteomická analýza potencionálnych prometastatických cieľov odvodených z porovnania bunečných línií s rôznym migračným potenciálom (Proteomic analysis of potential prometastatic targets derived from comparison of cell lines with different migration capability). In XXXIX. brněnské onkologické dny. 2015. ISSN 0862-495X.
Name in Czech: Proteomická analýza potenciálních prometastatických cílů odvozených z porovnání buněčných linii s různým migračním potenciálem
Name (in English): Proteomic analysis of potential prometastatic targets derived from comparison of cell lines with different migration capability
Biochemistry. Slovak. Czech Republic.
Changed by: Mgr. Jakub Faktor, Ph.D., učo 269105. Changed: 1/10/2015 09:27. -
RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3 '-end extended forms of snRNAsHROŠŠOVÁ, Dominika, Tomáš ŠIKORSKÝ, David POTĚŠIL, Marek BARTOŠOVIČ, Josef PASULKA, Zbyněk ZDRÁHAL, Richard ŠTEFL and Štěpánka VAŇÁČOVÁ. RBM7 subunit of the NEXT complex binds U-rich sequences and targets 3 '-end extended forms of snRNAs. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 8, p. 4236-4248. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv240.URL
RIV/00216224:14740/15:00081028 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Hroššová, Dominika (703 Slovakia, belonging to the institution) -- Šikorský, Tomáš (703 Slovakia, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Bartošovič, Marek (703 Slovakia, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA-POLYMERASE-II; CRYPTIC UNSTABLE TRANSCRIPTS; STRUCTURAL BASIS; SPLICING REGULATION; POLY(A) POLYMERASE; PROTEOMIC ANALYSIS; PROTEIN-STRUCTURE; QUALITY-CONTROL; EXOSOME; RECOGNITION
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 18/11/2015 13:02. -
KAŠNÝ, Martin, Lucie ŠKORPÍKOVÁ, Jana ILGOVÁ, Břetislav KOUDELA, Milan GELNAR, David POTĚŠIL, Zbyněk ZDRÁHAL, Peter THOMPSON and Dante ZARLENGA. The comparison of functional molecules from excretory-secretory products of two Trichinella species. In 14th International Conference on Trichinellosis in Berlin. 2015.
Zoology. English. Germany.
Keywords in English: Trichinella spiralis; Trichinella pseudospiralis; excretory-secretory products; mass spectrometry
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. et Mgr. Jana Ilgová, Ph.D., učo 223075. Changed: 16/10/2015 12:26. -
FAKTOR, Jakub, Lucia KNOPFOVÁ, David POTĚŠIL, Petr BENEŠ, Jan ŠMARDA and Pavel BOUCHAL. Analysis of potential prometastatic targets derived from proteomic comparison of MDA-MB-231 breast cancer cell lines with different migration capability. In 8th Summer Course for Mass Spectrometry in Biotechnology and Medicine. 2014.
Biochemistry. English. Croatia.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Jakub Faktor, Ph.D., učo 269105. Changed: 14/9/2015 15:33. -
LACINA, Karel, Martin KONHEFR, Jan NOVOTNÝ, David POTĚŠIL, Zbyněk ZDRÁHAL and Petr SKLÁDAL. Combining ferrocene, thiophene and a boronic acid: a hybrid ligand for reagentless electrochemical sensing of cis-diols. Tetrahedron Letters. Oxford: Pergamon Press, 2014, vol. 55, No 21, p. 3235-3238. ISSN 0040-4039. Available from: https://dx.doi.org/10.1016/j.tetlet.2014.04.036.URL
RIV/00216224:14740/14:00073706 Article in a journal. Organic chemistry. English. United Kingdom of Great Britain and Northern Ireland.
Lacina, Karel (203 Czech Republic, belonging to the institution) -- Konhefr, Martin (203 Czech Republic, belonging to the institution) -- Novotný, Jan (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution) -- Skládal, Petr (203 Czech Republic, belonging to the institution)
Keywords in English: SELF-ASSEMBLED MONOLAYER; PHENYLBORONIC ACID; ELECTRODE SURFACE; GOLD ELECTRODE; SACCHARIDES; RECOGNITION; SENSORS; BINDING; SUGARS; DEHYDROGENASE
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 22/10/2014 16:54. -
POTĚŠIL, David, Stanislav STEJSKAL, Marek BORSKÝ, Pavel ŠIMARA, Martina HAVELKOVÁ, Filip RÁZGA, Irena KRONTORÁD KOUTNÁ, Dana DVOŘÁKOVÁ, Jiří MAYER, Zdeněk RÁČIL and Zbyněk ZDRÁHAL. Determination of Imatinib in the Blood Cells of Chronic Myelogenous Leukemia Patients by Ion-Trap Mass Spectrometry. Analytical Letters. PHILADELPHIA: TAYLOR & FRANCIS INC, 2014, vol. 47, No 6, p. 944-957. ISSN 0003-2719. Available from: https://dx.doi.org/10.1080/00032719.2013.860538.URL
Name (in English): Determination of Imatinib in the Blood Cells of Chronic Myelogenous Leukemia Patients by Ion-Trap Mass Spectrometry
RIV/00216224:14110/14:00073663 Article in a journal. Analytical chemistry, separation. English. United States of America.
Potěšil, David (203 Czech Republic, guarantor, belonging to the institution) -- Stejskal, Stanislav (203 Czech Republic, belonging to the institution) -- Borský, Marek (203 Czech Republic) -- Šimara, Pavel (203 Czech Republic, belonging to the institution) -- Havelková, Martina (203 Czech Republic, belonging to the institution) -- Rázga, Filip (703 Slovakia) -- Krontorád Koutná, Irena (203 Czech Republic, belonging to the institution) -- Dvořáková, Dana (203 Czech Republic, belonging to the institution) -- Mayer, Jiří (203 Czech Republic, belonging to the institution) -- Ráčil, Zdeněk (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution)
Keywords in English: Mass spectrometry; Flow cytometry; Cell isolation technique; Chronic myelogenous leukemia; Imatinib; Peripheral blood
International impact: yes
Reviewed: yes
Changed by: Ing. Mgr. Věra Pospíšilíková, učo 9005. Changed: 5/3/2015 16:16. -
ŠEBEJOVÁ, Ludmila, Marek BORSKÝ, Zuzana JAŠKOVÁ, David POTĚŠIL, Veronika NAVRKALOVÁ, Jitka MALČÍKOVÁ, Martin ŠRÁMEK, Michael DOUBEK, Tomáš LOJA, Šárka POSPÍŠILOVÁ, Jiří MAYER and Martin TRBUŠEK. Distinct in vitro sensitivity of p53-mutated and ATM-mutated chronic lymphocytic leukemia cells to ofatumumab and rituximab. Experimental Hematology. New York: Elsevier Science Inc, 2014, vol. 42, No 10, p. 867-874. ISSN 0301-472X. Available from: https://dx.doi.org/10.1016/j.exphem.2014.06.003.URL
RIV/00216224:14740/14:00078349 Article in a journal. Oncology and haematology. English. United States of America.
Šebejová, Ludmila (203 Czech Republic, belonging to the institution) -- Borský, Marek (203 Czech Republic, belonging to the institution) -- Jašková, Zuzana (703 Slovakia, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Navrkalová, Veronika (203 Czech Republic, belonging to the institution) -- Malčíková, Jitka (203 Czech Republic, belonging to the institution) -- Šrámek, Martin (203 Czech Republic, belonging to the institution) -- Doubek, Michael (203 Czech Republic, belonging to the institution) -- Loja, Tomáš (703 Slovakia, belonging to the institution) -- Pospíšilová, Šárka (203 Czech Republic, belonging to the institution) -- Mayer, Jiří (203 Czech Republic, belonging to the institution) -- Trbušek, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: COMPLEMENT-DEPENDENT CYTOTOXICITY; P53 TUMOR-SUPPRESSOR; MONOCLONAL-ANTIBODIES; ATAXIA-TELANGIECTASIA; CD20 EXPRESSION; TP53 MUTATION; 11Q DELETION; FLUDARABINE; CHEMOIMMUNOTHERAPY; DYSFUNCTION
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 28/1/2015 13:52. -
SYKORA, J., Jan BREZOVSKÝ, Táňa KOUDELÁKOVÁ, M. LAHODA, Andrea FOŘTOVÁ, T. CHERNOVETS, Radka CHALOUPKOVÁ, Veronika ŠTĚPÁNKOVÁ, Zbyněk PROKOP, I. KUTA SMATANOVA, M. HOF and Jiří DAMBORSKÝ. Dynamics and Hydration Explain Failed Functional Transformation in Dehalogenase Design. Nature Chemical Biology. 2014, vol. 10, No 6, p. 428-430. ISSN 1552-4450.
RIV/00216224:14310/14:00074209 Article in a journal. Biochemistry. English. United States of America.
Sykora, J. (203 Czech Republic) -- Brezovský, Jan (203 Czech Republic, belonging to the institution) -- Koudeláková, Táňa (203 Czech Republic, belonging to the institution) -- Lahoda, M. (112 Belarus) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Chernovets, T. (112 Belarus) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Štěpánková, Veronika (203 Czech Republic, belonging to the institution) -- Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Kuta Smatanova, I. (203 Czech Republic) -- Hof, M. (276 Germany) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: haloalkane dehalogenase
Changed by: prof. Mgr. Jiří Damborský, Dr., učo 1441. Changed: 21/3/2017 08:04. -
HAFIDH, Said, David POTĚŠIL, Jan FÍLA, Jana FECÍKOVÁ, Věra ČAPKOVÁ, Zbyněk ZDRÁHAL and David HONYS. In search of ligands and receptors of the pollen tube: the missing link in pollen tube perception. BIOCHEMICAL SOCIETY TRANSACTIONS. LONDON: PORTLAND PRESS LTD, 2014, vol. 42, April, p. 388-394. ISSN 0300-5127. Available from: https://dx.doi.org/10.1042/BST20130204.URL
Name (in English): In search of ligands and receptors of the pollen tube: the missing link in pollen tube perception
RIV/00216224:14740/14:00073698 Article in a journal. Botany. English. United Kingdom of Great Britain and Northern Ireland.
Hafidh, Said (203 Czech Republic) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Fíla, Jan (203 Czech Republic) -- Fecíková, Jana (203 Czech Republic) -- Čapková, Věra (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution) -- Honys, David (203 Czech Republic)
Keywords in English: GPI-ANCHORED PROTEIN; PLANT SECRETOME; ARABIDOPSIS; GROWTH; GUIDANCE; GERMINATION; ATTRACTANT; COMPONENTS; MAIZE; CELL
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 10/3/2015 17:33. -
TUDEK, Agnieszka, Odil Porrua FUERTE, Tomasz KABZINSKI, Michael LIDSCHREIBER, Karel KUBÍČEK, Andrea FOŘTOVÁ, Francoise LACROUTE, Štěpánka VAŇÁČOVÁ, Patrick CRAMER, Richard ŠTEFL and Domenico LIBRI. Molecular Basis for Coordinating Transcription Termination with Noncoding RNA Degradation. Molecular Cell. CAMBRIDGE: CELL PRESS, 2014, vol. 55, No 3, p. 467-481. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2014.05.031.URL
RIV/00216224:14740/14:00073613 Article in a journal. Biophysics. English. United States of America.
Tudek, Agnieszka (250 France) -- Fuerte, Odil Porrua (724 Spain) -- Kabzinski, Tomasz (616 Poland, belonging to the institution) -- Lidschreiber, Michael (276 Germany) -- Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Lacroute, Francoise (250 France) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Cramer, Patrick (276 Germany) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution) -- Libri, Domenico (380 Italy)
Keywords in English: CRYPTIC UNSTABLE TRANSCRIPTS; POLYMERASE-II TRANSCRIPTS; BINDING PROTEINS NRD1; QUALITY-CONTROL; SACCHAROMYCES-CEREVISIAE; PERVASIVE TRANSCRIPTION; BIDIRECTIONAL PROMOTERS; POLY(A) POLYMERASE; NUCLEAR EXOSOME; TRAMP COMPLEX
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 29/10/2014 09:37. -
RÁČIL, Zdeněk, Filip RÁZGA, Hana KLAMOVA, Jaroslava VOGLOVÁ, Petra BELOHLAVKOVA, Ludmila MALÁSKOVÁ, David POTĚŠIL, Jan MUŽÍK, Daniela ŽÁČKOVÁ, Katerina Machova POLAKOVA, Zbyněk ZDRÁHAL, Jana MALAKOVA, Jiri SUTTNAR, Jan DYR and Jiří MAYER. No clinical evidence for performing trough plasma and intracellular imatinib concentrations monitoring in patients with chronic myelogenous leukaemia. Hematological Oncology. Hoboken: WILEY-BLACKWELL, 2014, vol. 32, No 2, p. 87-93. ISSN 0278-0232. Available from: https://dx.doi.org/10.1002/hon.2091.Full Text
RIV/00216224:14740/14:00074752 Article in a journal. Oncology and haematology. English. United States of America.
Ráčil, Zdeněk (203 Czech Republic, guarantor, belonging to the institution) -- Rázga, Filip (703 Slovakia) -- Klamova, Hana (203 Czech Republic) -- Voglová, Jaroslava (203 Czech Republic) -- Belohlavkova, Petra (203 Czech Republic) -- Malásková, Ludmila (203 Czech Republic) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Mužík, Jan (203 Czech Republic, belonging to the institution) -- Žáčková, Daniela (203 Czech Republic, belonging to the institution) -- Polakova, Katerina Machova (203 Czech Republic) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Malakova, Jana (203 Czech Republic) -- Suttnar, Jiri (203 Czech Republic) -- Dyr, Jan (203 Czech Republic) -- Mayer, Jiří (203 Czech Republic, belonging to the institution)
Keywords in English: CML; imatinib; plasma concentration; cell-asscociated concentration
International impact: yes
Reviewed: yes
Changed by: Mgr. Marie Šípková, DiS., učo 437722. Changed: 17/12/2019 10:25. -
FAKTOR, Jakub, Lucia KNOPFOVÁ, David POTĚŠIL, Petr BENEŠ, Jan ŠMARDA and Pavel BOUCHAL. Proteomics analysis of cell surface proteins associated with migration of MDA-MB-231 breast cancer cells. In 5th RECAMO joint meeting – Through cancer research towards applied molecular oncology. 2014. ISBN 978-80-86793-33-7.
Biochemistry. English. Czech Republic.
Changed by: Mgr. Jakub Faktor, Ph.D., učo 269105. Changed: 14/9/2015 15:39. -
BAČÍKOVÁ, Veronika, Josef PASULKA, Karel KUBÍČEK and Richard ŠTEFL. Structure and semi-sequence-specific RNA binding of Nrd1. Nucleic Acids Research. United Kingdom: Oxford University Press, 2014, vol. 42, No 12, p. 8024-8038. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gku446.URL
RIV/00216224:14740/14:00073612 Article in a journal. Biophysics. English. United Kingdom of Great Britain and Northern Ireland.
Bačíková, Veronika (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: protein Nrd1; RNA; untranslated RNA; fluorescence analysis; RNA processing; transcription termination; RNA surveillance; RNA recognition motif
International impact: yes
Reviewed: yes
Changed by: Martina Prášilová, učo 342282. Changed: 3/12/2014 10:24. -
ŠRÁMOVÁ, Eliška, Jana ILGOVÁ, Lucie ŠKORPÍKOVÁ, Břetislav KOUDELA, David POTĚŠIL, Zbyněk ZDRÁHAL, Petr HORÁK, Milan GELNAR and Martin KAŠNÝ. The protein composition of excretory-secretory products of three Trichinella species. In 13th ICOPA. 2014.
RIV/00216224:14310/14:00076505 Conference abstract. Zoology. English. Mexico.
Šrámová, Eliška (203 Czech Republic, belonging to the institution) -- Ilgová, Jana (703 Slovakia, belonging to the institution) -- Škorpíková, Lucie (203 Czech Republic, belonging to the institution) -- Koudela, Břetislav (203 Czech Republic) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Horák, Petr (203 Czech Republic) -- Gelnar, Milan (203 Czech Republic, belonging to the institution) -- Kašný, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Excretory-secretory products; trichinella; mass spectrometry
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. et Mgr. Jana Ilgová, Ph.D., učo 223075. Changed: 19/9/2014 14:02. -
DVOŘÁKOVÁ, Monika, David POTĚŠIL, Bořivoj VOJTĚŠEK and Pavel BOUCHAL. Úloha transgelinu v migraci a apoptóze buněk. In XXI. Biologické dny, Brno, 4.-5.9.2014. 2014. ISBN 978-80-260-6793-1.
Name in Czech: Úloha transgelinu v migraci a apoptóze buněk
Biochemistry. Czech. Czech Republic.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 16/8/2016 15:32. -
FAKTOR, Jakub, David POTĚŠIL, Lucia KNOPFOVÁ, Jan ŠMARDA, Petr BENEŠ and Pavel BOUCHAL. Analysis of cell surface proteome of two variants of MDA-MB 231 breast cancer cells with different migration properties. In 7th European Summer School Advanced Proteomics. 2013.
Biochemistry. English. Germany.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Jakub Faktor, Ph.D., učo 269105. Changed: 14/9/2015 12:33. -
ŠIMARA, Pavel, Stanislav STEJSKAL, Irena KRONTORÁD KOUTNÁ, David POTĚŠIL, Lenka TESAŘOVÁ, Michaela POTĚŠILOVÁ, Zbyněk ZDRÁHAL and Jiří MAYER. Apoptosis in chronic myeloid leukemia cells transiently treated with imatinib or dasatinib is caused by residual BCR-ABL kinase inhibition. American Journal of Hematology. NJ 07030-577 United States: John Wiley & Sons, 2013, vol. 88, No 5, p. 385-393. ISSN 0361-8609. Available from: https://dx.doi.org/10.1002/ajh.23419.PubMed
RIV/00216224:14330/13:00066079 Article in a journal. Oncology and haematology. English. United States of America.
Šimara, Pavel (203 Czech Republic, guarantor, belonging to the institution) -- Stejskal, Stanislav (203 Czech Republic, belonging to the institution) -- Krontorád Koutná, Irena (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Tesařová, Lenka (203 Czech Republic, belonging to the institution) -- Potěšilová, Michaela (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Mayer, Jiří (203 Czech Republic, belonging to the institution)
Keywords in English: Chronic Myeloid Leukemia; Imatinib; Dasatinib
Changed by: Mgr. Pavla Foltynová, Ph.D., učo 106624. Changed: 29/3/2019 14:00. -
NAVRKALOVÁ, Veronika, Ludmila ŠEBEJOVÁ, Jana ZEMANOVÁ, Jana KMÍNKOVÁ, Blanka KUBEŠOVÁ, Jitka MALČÍKOVÁ, Marek MRÁZ, Jana ŠMARDOVÁ, Šárka PAVLOVÁ, Michael DOUBEK, Yvona BRYCHTOVÁ, David POTĚŠIL, Veronika NÉMETHOVÁ, Jiří MAYER, Šárka POSPÍŠILOVÁ and Martin TRBUŠEK. ATM mutations uniformly lead to ATM dysfunction in chronic lymphocytic leukemia: application of functional test using doxorubicin. Haematologica. Pavia, Italy: Ferrata-Storti Foundation, 2013, vol. 98, No 7, p. 1124-1131. ISSN 0390-6078. Available from: https://dx.doi.org/10.3324/haematol.2012.081620.
Name in Czech: ATM mutace jednotně vést k ATM dysfunkce u chronické lymfocytární leukemie: aplikace funkčního testu pomocí doxorubicin
RIV/00216224:14740/13:00065621 Article in a journal. Oncology and haematology. English. Italy.
Navrkalová, Veronika (203 Czech Republic, belonging to the institution) -- Šebejová, Ludmila (203 Czech Republic, belonging to the institution) -- Zemanová, Jana (203 Czech Republic, belonging to the institution) -- Kmínková, Jana (203 Czech Republic, belonging to the institution) -- Kubešová, Blanka (203 Czech Republic, belonging to the institution) -- Malčíková, Jitka (203 Czech Republic, belonging to the institution) -- Mráz, Marek (203 Czech Republic, belonging to the institution) -- Šmardová, Jana (203 Czech Republic, belonging to the institution) -- Pavlová, Šárka (203 Czech Republic, belonging to the institution) -- Doubek, Michael (203 Czech Republic, belonging to the institution) -- Brychtová, Yvona (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Némethová, Veronika (703 Slovakia, belonging to the institution) -- Mayer, Jiří (203 Czech Republic, belonging to the institution) -- Pospíšilová, Šárka (203 Czech Republic, belonging to the institution) -- Trbušek, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: ATM mutations; CLL; ATM dysfunction; doxorubicin
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 3/4/2014 03:52. -
VORÁČOVÁ, Ivona, Jakub VANĚK, Josef PASULKA, Zora STŘELCOVÁ, Přemysl LUBAL and Petr HERMANN. Dissociation kinetics study of copper(II) complexes of DO3A, DOTA and its monosubstituted derivatives. Polyhedron. OXFORD: Elsevier Science Ltd., 2013, vol. 61, Sep, p. 99-104. ISSN 0277-5387. Available from: https://dx.doi.org/10.1016/j.poly.2013.05.042.URL
RIV/00216224:14740/13:00066398 Article in a journal. Inorganic chemistry. English. United Kingdom of Great Britain and Northern Ireland.
Voráčová, Ivona (203 Czech Republic) -- Vaněk, Jakub (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Střelcová, Zora (203 Czech Republic, belonging to the institution) -- Lubal, Přemysl (203 Czech Republic, guarantor, belonging to the institution) -- Hermann, Petr (203 Czech Republic)
Keywords in English: Macrocyclic ligands; Cyclen derivatives; Phosphonate complexes; Phosphinate complexes; Pyridine-N-oxide complexes; Copper complexes; Dissociation kinetics; Rate constants; Radiopharmaceuticals
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 11/4/2014 00:45. -
FOŘTOVÁ, Andrea, Eva ŠEBESTOVÁ, Veronika ŠTĚPÁNKOVÁ, Táňa KOUDELÁKOVÁ, Lenka PÁLKOVÁ, Jiří DAMBORSKÝ and Radka CHALOUPKOVÁ. DspA from Strongylocentrotus purpuratus: the First Biochemically Characterized Haloalkane Dehalogenase of Non-Microbial Origin. Biochimie. Elsevier, 2013, vol. 95, No 11, p. 2091-2096. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2013.07.025.
RIV/00216224:14310/13:00065807 Article in a journal. Biochemistry. English. United States of America.
Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Šebestová, Eva (203 Czech Republic, belonging to the institution) -- Štěpánková, Veronika (203 Czech Republic, belonging to the institution) -- Koudeláková, Táňa (203 Czech Republic, belonging to the institution) -- Pálková, Lenka (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution)
Keywords in English: Haloalkane Dehalogenase
International impact: yes
Reviewed: yes
Changed by: Mgr. Eva Šebestová, Ph.D., učo 40707. Changed: 26/6/2014 12:59. -
KUČERA, Jiří, Pavel BOUCHAL, Jan LOCHMAN, David POTĚŠIL, Oldřich JANICZEK, Zbyněk ZDRÁHAL and Martin MANDL. Ferrous iron oxidation by sulfur-oxidizing Acidithiobacillus ferrooxidans and analysis of the process at the levels of transcription and protein synthesis. Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. Dordrecht: Springer, 2013, vol. 103, No 4, p. 905-919. ISSN 0003-6072. Available from: https://dx.doi.org/10.1007/s10482-012-9872-2.
Name in Czech: Oxidace železa(II) síru oxidující bakterií Acidithiobacillus ferrooxidans a analýza procesu na úrovni transkripce a syntézy proteinů
RIV/00216224:14310/13:00066107 Article in a journal. Microbiology, virology. English. Netherlands.
Kučera, Jiří (203 Czech Republic, belonging to the institution) -- Bouchal, Pavel (203 Czech Republic, belonging to the institution) -- Lochman, Jan (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Janiczek, Oldřich (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Mandl, Martin (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Acidithiobacillus ferrooxidans; elemental sulfur oxidation; ferrous iron oxidation; pyrite oxidation; proteomics; reverse-transcription quantitative PCR
International impact: yes
Reviewed: yes
Changed by: doc. Ing. Martin Mandl, CSc., učo 1408. Changed: 13/1/2016 14:26. -
USTIANENKO, Dmytro, Dominika HROŠŠOVÁ, David POTĚŠIL, Kateřina CHALUPNÍKOVÁ, Kristýna HRAZDILOVÁ, Jiří PACHERNÍK, Kateřina CETKOVSKÁ, Stjepan ULDRIJAN, Zbyněk ZDRÁHAL and Štěpánka VAŇÁČOVÁ. Mammalian DIS3L2 exoribonuclease targets the uridylated precursors of let-7 miRNAs. RNA. New York: Cold Spring Harbor Laboratory Press, 2013, vol. 19, No 12, p. 1632-1638. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.040055.113.URL
RIV/00216224:14740/13:00066446 Article in a journal. Genetics and molecular biology. English. United States of America.
Ustianenko, Dmytro (804 Ukraine, belonging to the institution) -- Hroššová, Dominika (703 Slovakia, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Chalupníková, Kateřina (203 Czech Republic, belonging to the institution) -- Hrazdilová, Kristýna (203 Czech Republic, belonging to the institution) -- Pacherník, Jiří (203 Czech Republic, belonging to the institution) -- Cetkovská, Kateřina (203 Czech Republic, belonging to the institution) -- Uldrijan, Stjepan (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: DIS3L2; RNA degradation; RNA uridylation; let-7 miRNA
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 17/1/2014 15:38. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, F. OPLUŠTIL, Andrea JESENSKÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases. 2013.
RIV/00216224:14310/13:00072743 Patent. Biochemistry. English. Germany.
Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Opluštil, F. (203 Czech Republic) -- Jesenská, Andrea (203 Czech Republic, belonging to the institution) -- Nagata, Yuji (392 Japan)
Keywords in English: yperite; haloalkane dehalogenases
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 19/5/2014 12:42. -
DVOŘÁKOVÁ, Monika, David POTĚŠIL, Juraj LENČO, Rudolf NENUTIL, Bořivoj VOJTĚŠEK and Pavel BOUCHAL. Multiple roles of cytoskeletal proteins transgelins in breast cancer development and metastasis. In 4th RECAMO joint meeting. Brno, 30.9.-3.10.2013. 2013. ISBN 978-80-86793-28-3.
Biochemistry. English. Czech Republic.
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 25/8/2016 09:43. -
ŠEBEJOVÁ, Ludmila, Martin ŠRÁMEK, Zuzana JAŠKOVÁ, Marek BORSKÝ, David POTĚŠIL, Veronika NAVRKALOVÁ, Jitka MALČÍKOVÁ, Yvona BRYCHTOVÁ, Michael DOUBEK, Jiří MAYER, Šárka POSPÍŠILOVÁ and Martin TRBUŠEK. Mutace v genu TP53 jsou spojeny s vyšší rezistencí CLL buněk na ofatumumab a rituximab in vitro. In Pražský hematologický den. 2013.
Oncology and haematology. Czech. Czech Republic.
Changed by: Bc. Kateřina Kolesová, učo 112275. Changed: 25/11/2013 11:36. -
ŽĎÁRSKÁ, Markéta, Pavlína ZATLOUKALOVÁ, Mariana BENITEZ KEINRAD, Ondrej ŠEDO, David POTĚŠIL, Ondřej NOVÁK, Jana SVAČINOVÁ, Bedřich PEŠEK, Jiří MALBECK, Jana VAŠÍČKOVÁ, Zbyněk ZDRÁHAL and Jan HEJÁTKO. Proteome Analysis in Arabidopsis Reveals Shoot- and Root-Specific Targets of Cytokinin Action and Differential Regulation of Hormonal Homeostasis. Plant Physiology. USA: American Society of Plant Physiologists, 2013, vol. 161, No 2, p. 918-930. ISSN 0032-0889. Available from: https://dx.doi.org/10.1104/pp.112.202853.Plant Physiology website
Name (in English): Proteome Analysis in Arabidopsis Reveals Shoot- and Root-Specific Targets of Cytokinin Action and Differential Regulation of Hormonal Homeostasis
RIV/00216224:14740/13:00066058 Article in a journal. Genetics and molecular biology. English. United States of America.
Žďárská, Markéta (203 Czech Republic, belonging to the institution) -- Zatloukalová, Pavlína (203 Czech Republic, belonging to the institution) -- Benitez Keinrad, Mariana (484 Mexico, belonging to the institution) -- Šedo, Ondrej (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Novák, Ondřej (203 Czech Republic) -- Svačinová, Jana (203 Czech Republic) -- Pešek, Bedřich (203 Czech Republic) -- Malbeck, Jiří (203 Czech Republic) -- Vašíčková, Jana (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution) -- Hejátko, Jan (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Arabidopsis; proteome; cytokinin; ethylene; crosstalk
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 16/5/2014 16:29. -
FAKTOR, Jakub, Lucia KNOPFOVÁ, David POTĚŠIL, Petr BENEŠ, Jan ŠMARDA and Pavel BOUCHAL. Proteomics analysis of cell surface proteins associated with migration of MDAMB-231 breast cancer cells. In IntegRECAMO Summer school 2013 "Methods of basic and translational cancer reasearch". 2013.
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Jakub Faktor, Ph.D., učo 269105. Changed: 23/8/2016 16:20. -
STEJSKAL, Karel, David POTĚŠIL and Zbyněk ZDRÁHAL. SUPPRESION OF PROTEIN SAMPLE LOSSES IN AUTOSAMPLER VIALS. CHEMICKÉ LISTY. Praha: Česká společnost chemická, 2013, vol. 107, No 2013, p. "S324"-"S326", 3 pp. ISSN 0009-2770.
RIV/00216224:14740/13:00107015 Article in a journal. English. Czech Republic.
Stejskal, Karel (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RECOVERY; PEPTIDES
International impact: yes
Reviewed: yes
Changed by: Mgr. Michal Petr, učo 65024. Changed: 30/4/2020 10:12. -
STEJSKAL, Karel, David POTĚŠIL and Zbyněk ZDRÁHAL. Suppression of Peptide Sample Losses in Autosampler Vials. Journal of Proteome Research. Washington, USA: ACS, 2013, vol. 12, No 6, p. 3057-3062. ISSN 1535-3893. Available from: https://dx.doi.org/10.1021/pr400183v.URL
RIV/00216224:14740/13:00066299 Article in a journal. Analytical chemistry, separation. English. United States of America.
Stejskal, Karel (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: MASS-SPECTROMETRY ANALYSIS; LIQUID-CHROMATOGRAPHY; RECOVERY; PROTEIN; QUANTIFICATION; OPTIMIZATION; PURIFICATION; SURFACTANTS; ADSORPTION; PROTEOMICS
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 5/4/2014 08:00. -
HASAN, Khomaini, Artur Wiktor GORA, Jan BREZOVSKÝ, Radka CHALOUPKOVÁ, Hana MOSKALÍKOVÁ, Andrea FOŘTOVÁ, Yuji NAGATA, Jiří DAMBORSKÝ and Zbyněk PROKOP. The Effect of a Unique Halide-Stabilising Residue on the Catalytic Properties of Haloalkane Dehalogenase DatA from Agrobacterium tumefaciens C58. FEBS Journal. Blackwell, 2013, vol. 280, No 13, p. 3149-3159. ISSN 1742-464X. Available from: https://dx.doi.org/10.1111/febs.12238.
RIV/00216224:14310/13:00065822 Article in a journal. Biochemistry. English. United States of America.
Hasan, Khomaini (360 Indonesia, belonging to the institution) -- Gora, Artur Wiktor (616 Poland, belonging to the institution) -- Brezovský, Jan (203 Czech Republic, belonging to the institution) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Moskalíková, Hana (203 Czech Republic, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Nagata, Yuji (392 Japan) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Prokop, Zbyněk (203 Czech Republic, belonging to the institution)
Keywords in English: Haloalkane Dehalogenase
Changed by: Ing. Zdeňka Rašková, učo 140529. Changed: 29/4/2014 14:23. -
ŠEBEJOVÁ, Ludmila, Martin ŠRÁMEK, Zuzana JAŠKOVÁ, Marek BORSKÝ, David POTĚŠIL, Veronika NAVRKALOVÁ, Jitka MALČÍKOVÁ, Yvona BRYCHTOVÁ, Michael DOUBEK, Jiří MAYER, Šárka POSPÍŠILOVÁ and Martin TRBUŠEK. TP53 mutations associate with higher in vitro resistance of CLL cells to ofatumumab and rituximab. In XV iwCLL, Cologne, Německo. 2013.
Oncology and haematology. English. Germany.
Changed by: Bc. Kateřina Kolesová, učo 112275. Changed: 25/11/2013 13:26. -
ČINČÁROVÁ, Lenka, Gabriela LOCHMANOVÁ, Kateřina NOVÁKOVÁ, Pavla ŠILEROVÁ, Hana KONEČNÁ, Lenka FAJKUSOVÁ, Jiří FAJKUS and Zbyněk ZDRÁHAL. A combined approach for the study of histone deacetylase inhibitors. Molecular BioSystems. Cambridge: ROYAL SOC CHEMISTRY, 2012, vol. 8, No 11, p. 2937-2945. ISSN 1742-206X. Available from: https://dx.doi.org/10.1039/c2mb25136a.URL
RIV/00216224:14740/12:00060968 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Činčárová, Lenka (203 Czech Republic, guarantor, belonging to the institution) -- Lochmanová, Gabriela (203 Czech Republic, belonging to the institution) -- Nováková, Kateřina (203 Czech Republic, belonging to the institution) -- Šilerová, Pavla (203 Czech Republic, belonging to the institution) -- Konečná, Hana (203 Czech Republic, belonging to the institution) -- Fajkusová, Lenka (203 Czech Republic, belonging to the institution) -- Fajkus, Jiří (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, belonging to the institution)
Keywords in English: histone acetylation; inhibitors of histone deacetylases; MALDI-MS; LC-MS/MS
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 16/5/2014 16:33. -
HOLUB, Peter, Jana LALÁKOVÁ, Hana ČERNÁ, Josef PASULKA, Marie SÁRAZOVÁ, Kristýna HRAZDILOVÁ, Maria SAŇUDO ARCE, Fruzsina HÓBOR, Richard ŠTEFL and Štěpánka VAŇÁČOVÁ. Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation. Nucleic Acids Research. Oxford: Oxford University Press, 2012, vol. 40, No 12, p. 5679-5693. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gks223.URL
RIV/00216224:14740/12:00057391 Article in a journal. Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Holub, Peter (203 Czech Republic, belonging to the institution) -- Laláková, Jana (703 Slovakia, belonging to the institution) -- Černá, Hana (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Sárazová, Marie (203 Czech Republic, belonging to the institution) -- Hrazdilová, Kristýna (203 Czech Republic, belonging to the institution) -- Saňudo Arce, Maria (724 Spain, belonging to the institution) -- Hóbor, Fruzsina (348 Hungary, belonging to the institution) -- Štefl, Richard (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA recognition; binding; RNA processing; RNA-protein interaction
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 7/4/2013 12:25. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, F. OPLUŠTIL, Andrea JESENSKÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases. 2012.
RIV/00216224:14310/12:00072742 Patent. Biochemistry. English. Canada.
Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Opluštil, F. (203 Czech Republic) -- Jesenská, Andrea (203 Czech Republic, belonging to the institution) -- Nagata, Yuji (392 Japan)
Keywords in English: yperite; haloalkane dehalogenases
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 19/5/2014 12:51. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, F. OPLUŠTIL, Andrea JESENSKÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases. 2012.
RIV/00216224:14310/12:00072741 Patent. Biochemistry. English. Israel.
Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Opluštil, F. (203 Czech Republic) -- Jesenská, Andrea (203 Czech Republic) -- Nagata, Yuji (392 Japan)
Keywords in English: yperite; haloalkane dehalogenases
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 19/5/2014 12:50. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, Filip OPLUŠTIL, Andrea FOŘTOVÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases. 2012.
Name (in English): Method of detoxication of yperite by using haloalkane dehalogenases
Biochemistry. English. Israel. obsah podléhá obchodnímu tajemství.
Keywords in English: yperite; haloalkane dehalogenases
Changed by: prof. Mgr. Jiří Damborský, Dr., učo 1441. Changed: 7/4/2014 13:36. -
LOCHMANOVÁ, Gabriela, Lenka JEDLIČKOVÁ, David POTĚŠIL, Alexandra TOMANCOVÁ, Jan VERNER, Šárka POSPÍŠILOVÁ, Michael DOUBEK, Jiří MAYER and Zbyněk ZDRÁHAL. Potential biomarkers for early detection of acute graft-versus-host disease. Proteomics : clinical applications. Weinheim: WILEY-VCH Verlag, 2012, vol. 6, 7-8, p. 351-363. ISSN 1862-8346. Available from: https://dx.doi.org/10.1002/prca.201100104.URL
Name (in English): Potential biomarkers for early detection of acute graft-versus-host disease
RIV/00216224:14740/12:00064911 Article in a journal. Oncology and haematology. English. United States of America.
Lochmanová, Gabriela (203 Czech Republic, belonging to the institution) -- Jedličková, Lenka (203 Czech Republic, belonging to the institution) -- Potěšil, David (203 Czech Republic, belonging to the institution) -- Tomancová, Alexandra (203 Czech Republic, belonging to the institution) -- Verner, Jan (203 Czech Republic, belonging to the institution) -- Pospíšilová, Šárka (203 Czech Republic, belonging to the institution) -- Doubek, Michael (203 Czech Republic, belonging to the institution) -- Mayer, Jiří (203 Czech Republic, belonging to the institution) -- Zdráhal, Zbyněk (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: BONE-MARROW-TRANSPLANTATION; STEM-CELL TRANSPLANTATION; C-REACTIVE PROTEIN; SERUM CYTOKINE LEVELS; NECROSIS-FACTOR-ALPHA; ACUTE GVHD; SOLUBLE INTERLEUKIN-2-RECEPTOR; QUANTITATIVE PROTEOMICS; MAJOR COMPLICATIONS; PLASMA BIOMARKERS
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 12/4/2013 04:05. -
ŠIKORSKÝ, Tomáš, Fruzsina HÓBOR, Eva KRIŽANOVÁ, Josef PASULKA, Karel KUBÍČEK and Richard ŠTEFL. Recognition of asymmetrically dimethylated arginine by TDRD3. Nucleic Acids Research. Oxford: Oxford University Press, 2012, vol. 40, No 22, p. 11748-11755. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gks929.URL
Name in Czech: Recognition of asymmetrically dimethylated arginine by TDRD3
Name (in English): Recognition of asymmetrically dimethylated arginine by TDRD3
RIV/00216224:14740/12:00057639 Article in a journal. Biophysics. English. United Kingdom of Great Britain and Northern Ireland.
Šikorský, Tomáš (703 Slovakia, belonging to the institution) -- Hóbor, Fruzsina (348 Hungary, belonging to the institution) -- Križanová, Eva (703 Slovakia, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: tudor; assymetric dimethylarginine; histone; C-terminal domain of RNA polymerase II; recognition mark; nuclear magnetic resonance
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 12/4/2013 08:01. -
KUBÍČEK, Karel, Hana ČERNÁ, Peter HOLUB, Josef PASULKA, Dominika HROŠŠOVÁ, Frank LOEHR, Ctirad HOFR, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. Serine phosphorylation and proline isomerization in RNAP II CTD control recruitment of Nrd1. Genes & Development. New York: Cold Spring Harbor Laboratory Press, 2012, vol. 26, No 17, p. 1891-1896. ISSN 0890-9369. Available from: https://dx.doi.org/10.1101/gad.192781.112.URL
RIV/00216224:14740/12:00057508 Article in a journal. Biophysics. English. United States of America.
Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Černá, Hana (203 Czech Republic, belonging to the institution) -- Holub, Peter (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Hroššová, Dominika (703 Slovakia, belonging to the institution) -- Loehr, Frank (276 Germany) -- Hofr, Ctirad (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: RNA polymerase II; CTD code; phosphorylation; proline isomerization; RNA processing and degradation; NMR spectroscopy; structure
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 7/4/2013 04:28. -
HOLUB, Peter and Štěpánka VAŇÁČOVÁ. TRAMP Stimulation of Exosome. Online. In Guillaume F. Chanfreau; Fuyuhiko Tamanoi. The Enzymes: Eukaryotic RNases and their Partners in RNA Degradation and Biogenesis, Part A. Burlington: Elsevier Inc., 2012, p. 77-95. "Vol. 31"; Part A. ISBN 978-0-12-404740-2. Available from: https://dx.doi.org/10.1016/B978-0-12-404740-2.00004-5.URL
RIV/00216224:14740/12:00065939 Chapter(s) of a specialized book. Genetics and molecular biology. English. United States of America.
Holub, Peter (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: TRAMP; Noncanonical polyadenylation; RNA degradation; RNA surveillance;Trf4; Zinc knuckle proteins; Air1; Mtr4; Noncoding RNAs
International impact: yes
Changed by: Olga Křížová, učo 56639. Changed: 30/4/2014 04:08. -
STRUHÁROVÁ, Iva, Pavel BOUCHAL, Jiří JARKOVSKÝ, Kristýna HRAZDILOVÁ, Monika DVOŘÁKOVÁ, Lenka HERNYCHOVÁ, Jiří DAMBORSKÝ, Petr SOVA and Bořivoj VOJTĚŠEK. An induction of Retinol Binding Protein 4 by new platinum-based anticancer agent LA-12. In "2nd RECAMO joint meeting": Role of p53, MDM2, AGR2/3 and ubiquitin/chaperone system in tumour biology. 2011. ISBN 978-80-86793-20-7.
Name (in English): An induction of Retinol Binding Protein 4 by new platinum-based anticancer agent LA-12
Biochemistry. English. Czech Republic.
Keywords in English: proteomics, LA-12, RBP4
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 19/12/2011 20:47. -
HASAN, Khomaini, Andrea FOŘTOVÁ, Táňa KOUDELÁKOVÁ, Radka CHALOUPKOVÁ, M. ISHITSUKA, Yuji NAGATA, Jiří DAMBORSKÝ and Zbyněk PROKOP. Biochemical Characteristics of the Novel Haloalkane Dehalogenase DatA Isolated from the Plant Pathogen Agrobacterium tumefaciens C58. Applied and Environmental Microbiology. 2011, vol. 77, No 5, p. 1881-1884. ISSN 0099-2240. Available from: https://dx.doi.org/10.1128/AEM.02109-10.
RIV/00216224:14310/11:00049448 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Hasan, Khomaini (360 Indonesia, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Koudeláková, Táňa (203 Czech Republic, belonging to the institution) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Ishitsuka, M. (392 Japan) -- Nagata, Yuji (392 Japan, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Prokop, Zbyněk (203 Czech Republic, belonging to the institution)
Keywords in English: Novel Haloalkane Dehalogenase DatA ;Agrobacterium tumefaciens C58
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 20/4/2012 10:38. -
STSIAPANAVA, Alena, Radka CHALOUPKOVÁ, Andrea FOŘTOVÁ, J. BRYNDA, M. S. WEISS, Jiří DAMBORSKÝ and I. KUTÁ-SMATANOVÁ. Crystallization and Preliminary Crystallographic Analysis of Rhodococcus rhodochrous Wild-type DhAa Protein and its Variant DhaA13 Complexed with Different Ligands. In IX. Discussions in Structural Molecular Biology and Bioinformatics. 2011.
RIV/00216224:14310/11:00049452 Presentations at conferences. Biochemistry. English. Czech Republic.
Stsiapanava, Alena (112 Belarus) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Brynda, J. (203 Czech Republic) -- Weiss, M. S. (203 Czech Republic) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Kutá-Smatanová, I. (703 Slovakia)
Keywords in English: DhAa; Crystallization; Rhodococcus rhodochrous
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: prof. Mgr. Jiří Damborský, Dr., učo 1441. Changed: 12/8/2011 12:49. -
STSIAPANAVA, Alena, Radka CHALOUPKOVÁ, Andrea FOŘTOVÁ, J. BRYNDA, M. S. WEISS, Jiří DAMBORSKÝ and Ivana KUTÁ-SMATANOVÁ. Crystallization and Preliminary X-ray Diffraction Analysis of the Wild-Type Haloalkane Dehalogenase DhaA and its Variant DhaA13 Complexed with Different Ligands. Acta Crystallographica F. 2011, vol. 67, No 67, p. 253-257. ISSN 1744-3091. Available from: https://dx.doi.org/10.1107/S1744309110051286.
RIV/00216224:14310/11:00049440 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Stsiapanava, Alena (112 Belarus, belonging to the institution) -- Chaloupková, Radka (203 Czech Republic, belonging to the institution) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Brynda, J. (203 Czech Republic) -- Weiss, M. S. (203 Czech Republic) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Kutá-Smatanová, Ivana (203 Czech Republic, belonging to the institution)
Keywords in English: Crystallization; X-ray Diffraction Analysis; Haloalkane Dehalogenase DhaA
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 20/4/2012 10:35. -
ČINČÁROVÁ, Lenka, Gabriela LOCHMANOVÁ, Hana KONEČNÁ, Kateřina NOVÁKOVÁ, Lenka FAJKUSOVÁ, Jiří FAJKUS and Zbyněk ZDRÁHAL. Effects of histone deacetylases inhibitors on histone H4 acetylation state of MEC-1 cells. In 5th Central and Eastern European Proteomic Conference. 2011.
Keywords in English: hdac inhibitors, proteomics, post-translational modifications
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: Mgr. Gabriela Lochmanová, Ph.D., učo 15496. Changed: 10/4/2012 21:29. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, František OPLUŠTIL, Andrea FOŘTOVÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases. 2011.
Name in Czech: Způsob detoxikace sulfidického yperitu působením halogenalkandehalogenáz
Biochemistry. English. United States of America.
Keywords in English: yperite; haloalkane dehalogenases
Changed by: prof. Mgr. Jiří Damborský, Dr., učo 1441. Changed: 7/4/2014 13:44. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, F. OPLUŠTIL, Andrea JESENSKÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases,. 2011.
RIV/00216224:14310/11:00072740 Patent. Biochemistry. English. United States of America.
Prokop, Zbyněk (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution) -- Opluštil, F. (203 Czech Republic) -- Jesenská, Andrea (203 Czech Republic) -- Nagata, Yuji (392 Japan)
Keywords in English: yperite; haloalkane dehalogenases
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 19/5/2014 12:50. -
PROKOP, Zbyněk, Jiří DAMBORSKÝ, František OPLUŠTIL, Andrea JESENSKÁ and Yuji NAGATA. Method of detoxication of yperite by using haloalkane dehalogenases,. 2011.
Name in Czech: Způsov detoxikace sulfidického yperitupůsobením halogenalkandehalogenáz
RIV/00216224:14310/11:00053385 Patent. Biochemistry. English. Japan.
Prokop, Zbyněk (203 Czech Republic, guarantor, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, belonging to the institution) -- Opluštil, František (203 Czech Republic) -- Jesenská, Andrea (203 Czech Republic, belonging to the institution) -- Nagata, Yuji (392 Japan)
Keywords in English: yperite; haloalkane dehalogenases
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 19/5/2014 12:49. -
HÓBOR, Fruzsina, Roberto PERGOLI, Karel KUBÍČEK, Dominika HROŠŠOVÁ, Veronika BAČÍKOVÁ, Michal ZIMMERMANN, Josef PASULKA, Ctirad HOFR, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. Recognition of transcription termination signal by the nuclear polyadenylated RNA-binding (Nab)3 protein. The Journal of Biological Chemistry. Am. Soc. for Biochem. and Mol. Biol., 2011, vol. 286, No 5, p. 3645-3657. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.M110.158774.
RIV/00216224:14740/11:00049398 Article in a journal. Biochemistry. English. United States of America.
Hóbor, Fruzsina (348 Hungary, belonging to the institution) -- Pergoli, Roberto (380 Italy, belonging to the institution) -- Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Hroššová, Dominika (703 Slovakia, belonging to the institution) -- Bačíková, Veronika (203 Czech Republic, belonging to the institution) -- Zimmermann, Michal (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Hofr, Ctirad (203 Czech Republic, belonging to the institution) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: NMR; Protein structure; RNA processing; RNA-protein interaction; Transcription termination
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 25/3/2012 05:35. -
KOUDELÁKOVÁ, Táňa, Eva CHOVANCOVÁ, Jan BREZOVSKÝ, Marta MONINCOVÁ, Andrea FOŘTOVÁ, Jiří JARKOVSKÝ and Jiří DAMBORSKÝ. Substrate Specificity of Haloalkane Dehalogenases. Biochemical Journal. 2011, vol. 435, No 435, p. 345-354. ISSN 0264-6021. Available from: https://dx.doi.org/10.1042/BJ20101405.
Name in Czech: Substrátová specifita haloalkan dehalogenáz
RIV/00216224:14310/11:00049439 Article in a journal. Biochemistry. English. United Kingdom of Great Britain and Northern Ireland.
Koudeláková, Táňa (203 Czech Republic, belonging to the institution) -- Chovancová, Eva (203 Czech Republic, belonging to the institution) -- Brezovský, Jan (203 Czech Republic, belonging to the institution) -- Monincová, Marta (203 Czech Republic) -- Fořtová, Andrea (203 Czech Republic, belonging to the institution) -- Jarkovský, Jiří (203 Czech Republic, belonging to the institution) -- Damborský, Jiří (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: substrate specificity; haloalkane dehalogenases; halogenated compounds
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 20/4/2012 10:34. -
STRUHÁROVÁ, Iva, Pavel BOUCHAL, Jiří JARKOVSKÝ, Kristýna HRAZDILOVÁ, Monika DVOŘÁKOVÁ, Lenka HERNYCHOVÁ, Jiří DAMBORSKÝ, Petr SOVA and Bořivoj VOJTĚŠEK. The new platinum anticancer agent LA-12 induces Retinol Bionding Protein 4 in vivo. In 5th European Summer School in "Proteomics Basics". 2011.
Biochemistry. English. Italy.
Keywords in English: proteomics, retinol binding protein 4, RBP4, LA-12
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Reviewed: yes
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 1/12/2011 15:24. -
BOUCHAL, Pavel, Jiří JARKOVSKÝ, Kristýna HRAZDILOVÁ, Monika DVOŘÁKOVÁ, Iva STRUHÁROVÁ, Lenka HERNYCHOVÁ, Jiří DAMBORSKÝ, Petr SOVA and Bořivoj VOJTĚŠEK. The new platinum-based anticancer agent LA-12 induces retinol binding protein 4 in vivo. Proteome Science. BioMed Central, 2011, vol. 9, No 68, p. "nestránkováno", 9 pp. ISSN 1477-5956. Available from: https://dx.doi.org/10.1186/1477-5956-9-68.URL
Name in Czech: Nové platinové cytostatikum LA-12 indukuje retinol-vázající protein 4 in vivo
Name (in English): The new platinum-based anticancer agent LA-12 induces retinol binding protein 4 in vivo
RIV/00216224:14310/11:00050153 Article in a journal. Biochemistry. English. United States of America.
Bouchal, Pavel (203 Czech Republic, guarantor, belonging to the institution) -- Jarkovský, Jiří (203 Czech Republic, belonging to the institution) -- Hrazdilová, Kristýna (203 Czech Republic) -- Dvořáková, Monika (203 Czech Republic, belonging to the institution) -- Struhárová, Iva (203 Czech Republic, belonging to the institution) -- Hernychová, Lenka (203 Czech Republic) -- Damborský, Jiří (203 Czech Republic, belonging to the institution) -- Sova, Petr (203 Czech Republic) -- Vojtěšek, Bořivoj (203 Czech Republic)
Keywords in English: (OC-6-43)-bis(acetato)(1-adamantylamine)amminedichloroplatinum (IV) (LA-12); plasma retinol-binding protein 4; RBP4; cisplatin; adamantylamine; proteomics
International impact: yes
Changed by: Ing. Andrea Mikešková, učo 137293. Changed: 7/4/2012 15:48. -
KUBÍČEK, Karel, Josef PASULKA, Hana ČERNÁ, Frank LÖHR and Richard ŠTEFL. 1H, 13C, and 15N resonance assignments for the CTD-Interacting Domain of Nrd1 bound to Ser5-phosphorylated CTD of RNA Polymerase II. Biomolecular NMR Assignments. Netherlands: Springer Netherlands, 2011, vol. 5, No 2, p. 203-205. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-011-9300-y.URL
Name in Czech: Přířazení 1H, 13C, 15N rezonančních frekvencí CTD interagující domény proteinu Nrd1 v komplexu s 5pSer CTD RNA polymerázy II
RIV/00216224:14740/11:00049411 Article in a journal. Biophysics. English. Netherlands.
Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Pasulka, Josef (203 Czech Republic, belonging to the institution) -- Černá, Hana (203 Czech Republic, belonging to the institution) -- Löhr, Frank (276 Germany) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: CTD-interacting domain (CID); CTD; RNA-processing; transcription termination
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 28/3/2012 00:08. -
PASULKA, Josef, Jaroslav KOČA and Richard ŠTEFL. The computational view inside the dynamical behavior of the RNA-binding motive. In 8th Discussions in Structural Molecular Biology, Nove Hrady, March 18 - 20, 2010. 2010. ISSN 1211-5894.
Name in Czech: The computational view inside the dynamical behavior of the RNA-binding motive
Name (in English): The computational view inside the dynamical behavior of the RNA-binding motive
Genetics and molecular biology. English. Czech Republic.
Keywords in English: molecular dynamics; RNA-binding motive; ADAR2; RNA recognition
Changed by: Mgr. Josef Pasulka, Ph.D., učo 105979. Changed: 30/12/2010 11:55. -
PERGOLI, Roberto, Karel KUBÍČEK, Fruzsina HÓBOR, Josef PASULKA and Richard ŠTEFL. (1)H, (13)C, and (15)N chemical shift assignments for the RNA recognition motif of Nab3. Biomolecular NMR Assignments. UNITED STATES: SPRINGER, 2010, vol. 4, No 1, p. 119-121. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-010-9221-1.URL
Name in Czech: Přiřazení (1)H, (13)C a (15)N rezonančních frekvencí RNA-rozpoznávacího motivu proteinu Nab3
Name (in English): (1)H, (13)C, and (15)N chemical shift assignments for the RNA recognition motif of Nab3.
RIV/00216224:14310/10:00040504 Article in a journal. Biophysics. English. Netherlands.
Pergoli, Roberto (380 Italy, belonging to the institution) -- Kubíček, Karel (203 Czech Republic, belonging to the institution) -- Hóbor, Fruzsina (348 Hungary, belonging to the institution) -- Pasulka, Josef (203 Czech Republic) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: Nab3 - RNA-binding motif - RRM - Transcription termination
International impact: yes
Reviewed: yes
Changed by: doc. Mgr. Karel Kubíček, PhD., učo 20563. Changed: 17/1/2012 16:46. -
SAŇUDO ARCE, Maria, Martin JACKO, Christiane RAMMELT, Štěpánka VAŇÁČOVÁ and Richard ŠTEFL. 1H, 13C, and 15N chemical shift assignments of ZCCHC9. Biomolecular NMR Assignments. SPRINGER, 2010, vol. 5, No 1, p. 19-21. ISSN 1874-2718. Available from: https://dx.doi.org/10.1007/s12104-010-9257-2.URL
RIV/00216224:14310/10:00040608 Article in a journal. Genetics and molecular biology. English. United States of America.
Saňudo Arce, Maria (724 Spain, belonging to the institution) -- Jacko, Martin (203 Czech Republic, belonging to the institution) -- Rammelt, Christiane (756 Switzerland) -- Vaňáčová, Štěpánka (203 Czech Republic, belonging to the institution) -- Štefl, Richard (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: ZCCHC9; Zinc knuckle; CCHC; RNA degradation
International impact: yes
Reviewed: yes
Changed by: Olga Křížová, učo 56639. Changed: 19/4/2013 14:19. -
SAN PAOLO, Salvatore, Štěpánka VAŇÁČOVÁ, L. SCHENK, T. SCHERRER, Diana BLANK, Walter KELLER and Andre P. GERBER. Distinct roles of non-canonical poly(A) polymerases in RNA metabolism. PLoS Genetics. Public Library of Science, 2009, vol. 5, No 7, p. e1000555, 17 pp. ISSN 1553-7390.URL
Name in Czech: Distinct roles of non-canonical poly(A) polymerases in RNA metabolism
Name (in English): Distinct roles of non-canonical poly(A) polymerases in RNA metabolism
RIV/00216224:14310/09:00036231 Article in a journal. Genetics and molecular biology. English. United States of America.
San Paolo, Salvatore (380 Italy) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor) -- Schenk, L. (756 Switzerland) -- Scherrer, T. (756 Switzerland) -- Blank, Diana (756 Switzerland) -- Keller, Walter (276 Germany) -- Gerber, Andre P. (756 Switzerland)
Keywords in English: TRAMP; polyadenylation; RNA degradation; RNA quality control; Trf4; Trf5
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 29/3/2010 15:41. -
VAŇÁČOVÁ, Štěpánka. Distinct Roles of TRAMP complexes in yeast RNA Metabolism. In Messenger RNA 3' ends and gene expression - EMBO workshop. 2009.URL
Name in Czech: Distinct Roles of TRAMP complexes in yeast RNA Metabolism
Name (in English): Distinct Roles of TRAMP complexes in yeast RNA Metabolism
Genetics and molecular biology. English. United Kingdom of Great Britain and Northern Ireland.
Keywords in English: Messenger RNA 3 prime end formation provides a clear paradigm for such an interconnection point as it represents the cross-over between transcribing a gene and translating its messenger RNA.
Type of participation: requested lecture
International impact: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:56. -
HOLUB, Peter and Štěpánka VAŇÁČOVÁ. Functional characterization of TRAMP complex and its subunits. In EMBO Young Investigator Programme PhD course. 2009.URL
Biochemistry. English. Germany.
Keywords in English: RNA quality control
Type of participation: active participation (giving a lecture, organization, etc.)
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:57. -
HROŠŠOVÁ, Dominika, Stjepan ULDRIJAN, Aleš HAMPL, Zbyněk ZDRÁHAL and Štěpánka VAŇÁČOVÁ. Characterization of a specific 3'- end RNA modification and specific RNA- binding proteins. In RNA Club 2009. 2009. ISSN 1214-8598.URL
Name in Czech: Characterization of a specific 3'- end RNA modification and specific RNA- binding proteins
Name (in English): Characterization of a specific 3'- end RNA modification and specific RNA- binding proteins
Genetics and molecular biology. English. Czech Republic.
Keywords in English: RNA Club
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:57. -
VAŇÁČOVÁ, Štěpánka. RNA Club 2009. 2009.URL
Name in Czech: RNA Club 2009
Name (in English): RNA Club 2009
RIV/00216224:14310/09:00039798 Organization of a conference. Genetics and molecular biology. English. Czech Republic.
Vaňáčová, Štěpánka (203 Czech Republic, guarantor)
Keywords in English: RNA Club
International impact: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:59. -
VAŇÁČOVÁ, Štěpánka. RNA substrate selection by the TRAMP complex. In 9th EMBO Young Investigator Programme Meeting. 2009.URL
Name in Czech: RNA substrate selection by the TRAMP complex
Name (in English): RNA substrate selection by the TRAMP complex
Genetics and molecular biology. English. Turkey.
Keywords in English: EMBO YIP meeting
Type of participation: requested lecture
International impact: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:58. -
LALÁKOVÁ, Jana and Štěpánka VAŇÁČOVÁ. TRAMP-mediated spliceosomal intron turnover. In RNA Club 2009. 2009. ISSN 1214-8598.URL
Name in Czech: TRAMP-mediated spliceosomal intron turnover
Name (in English): TRAMP-mediated spliceosomal intron turnover
Genetics and molecular biology. English. Czech Republic.
Keywords in English: RNA Club
Type of participation: active participation (giving a lecture, organization, etc.)
International impact: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 9/4/2010 10:59. -
HOLČÁKOVÁ, Jitka, Lenka HERNYCHOVÁ, Pavel BOUCHAL, Kristýna BROŽKOVÁ, Jan ŽALOUDÍK, Dalibor VALÍK, Rudolf NENUTIL and Bořivoj VOJTĚŠEK. Identification of alphaB-crystallin, a biomarker of renal cell carcinoma by SELDI-TOF MS. The International Journal of Biological Markers. Itálie: Wichtig editore, 2008, vol. 23, No 1, p. 48-53. ISSN 0393-6155.
Name in Czech: Identifikace alfaB-krystalinu, biomarkeru renálního karcinomu, metodou SELDI-TOF MS
RIV/00216224:14310/08:00026753 Article in a journal. Genetics and molecular biology. English. Italy.
Holčáková, Jitka (203 Czech Republic, guarantor) -- Hernychová, Lenka (203 Czech Republic) -- Bouchal, Pavel (203 Czech Republic, belonging to the institution) -- Brožková, Kristýna (203 Czech Republic, belonging to the institution) -- Žaloudík, Jan (203 Czech Republic, belonging to the institution) -- Valík, Dalibor (203 Czech Republic, belonging to the institution) -- Nenutil, Rudolf (203 Czech Republic, belonging to the institution) -- Vojtěšek, Bořivoj (203 Czech Republic)
Keywords in English: alphaB-crystallin; biomarker; ProteinChip; renal cell carcionoma; SELDI-TOF MS
International impact: yes
Reviewed: yes
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 1/2/2012 09:53. -
BROŽKOVÁ, Kristýna, Eva BUDINSKÁ, Pavel BOUCHAL, Lenka HERNYCHOVÁ, Dana KNOFLÍČKOVÁ, Dalibor VALÍK, Rostislav VYZULA, Bořivoj VOJTĚŠEK and Rudolf NENUTIL. Surface-enhanced laser desorption/ionization time-of-flight proteomic profiling of breast carcinomas identifies clinicopathologically relevant groups of patients similar to previously defined clusters from cDNA expression. Breast Cancer Research. London, Great Britain: Biomed Central Ltd., 2008, vol. 10, No 3, p. R48, 11 pp. ISSN 1465-5411. Available from: https://dx.doi.org/10.1186/bcr2101.
Name in Czech: Proteinové profilování karcinomů prsu metodou SELDI-TOF MS odhaluje klinickopatologicky relevantní skupiny pacientů stejně jako dříve definované klastry na základě exprese cDNA
RIV/00216224:14310/08:00028249 Article in a journal. Oncology and haematology. English. United Kingdom of Great Britain and Northern Ireland.
Brožková, Kristýna (203 Czech Republic, belonging to the institution) -- Budinská, Eva (703 Slovakia, belonging to the institution) -- Bouchal, Pavel (203 Czech Republic, belonging to the institution) -- Hernychová, Lenka (203 Czech Republic) -- Knoflíčková, Dana (203 Czech Republic) -- Valík, Dalibor (203 Czech Republic, belonging to the institution) -- Vyzula, Rostislav (203 Czech Republic, belonging to the institution) -- Vojtěšek, Bořivoj (203 Czech Republic) -- Nenutil, Rudolf (203 Czech Republic, guarantor, belonging to the institution)
Keywords in English: breast cancer; SELDI-TOF MS; cDNA clusters
International impact: yes
Reviewed: yes
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 1/2/2012 09:55. -
BOUCHAL, Pavel, Lenka HERNYCHOVÁ, Monika MUDROCHOVÁ, Kristýna BROŽKOVÁ, Jarmila SOBOTKOVÁ, Spiros D. GARBIS, Petr NOVÁK, Rostislav VYZULA, Rudolf NENUTIL and Bořivoj VOJTĚŠEK. The ways leading to identification of potential biomarkers in SELDI-TOF MS based proteomic studies. In 8th Siena Meeting: From Genome To Proteome: Integration and Proteome Completion. Siena, Italy: The University of Siena, 2008, p. 153.
Name in Czech: Způsoby identifikace potenciálních biomarkerů detekovaných v proteomických studiích na bázi SELDI-TOF MS
Biochemistry. English. Italy.
Keywords in English: SELDI-TOF MS; biomarkers; protein isolation and identification; mass spectrometry
Type of proceedings: post-proceedings
Changed by: doc. Mgr. Pavel Bouchal, Ph.D., učo 8757. Changed: 13/11/2008 18:19. -
CARLTON, Jane, R.P. HIRT, J.C. SILVA, A.L. DELCHER, M. SCHATZ, Q. ZHAO, J.R. WORTMAN, S.L. BIDWELL, U.C. ALSMARK, S. BESTEIRO, T. SICHERITZ-PONTEN, C.J. NOEL, J.B. DACKS, P.G. FOSTER, C. SIMILLION, Y. VAN DE PEER, D. MIRANDA-SAAVEDRA, G.J. BARTON, G.D. WESTROP, S. MULLER, D. DESSI, P.L. FIORI, Q. REN, I. PAULSEN, H. ZHANG, F.D. BASTIDA-CORCUERA, A. SIMOES-BARBOSA, M.T. BROWN, R. HAYES, M. MUKHERJEE, C.Y. OKUMURA, R. SCHNEIDER, A.J. SMITH, Štěpánka VAŇÁČOVÁ, M. VILLALVAZO, B.J. HAAS, M. PERTEA, T. FELDBLYUM, T.R. UTTERBACK, Chung-Li SHU, K. OSOEGAWA, P.J. DE JONG, Ivan HRDY, Lenka HORVATHOVA, Zuzana ZUBACOVA, Pavel DOLEZAL, S.B. MALIK, J.Jr. LOGSDON, K. HENZE, A. GUPTA, C.C. WANG, R.L. DUNNE, J.A. UPCROFT, Peter UPCROFT, Owen WHITE, S.L. SALZBERG, P. TANG, Cheng-Hsun CHIU, Ying-Shiung LEE, T.M. EMBLEY, G.H. COOMBS, J.C. MOTTRAM, Jan TACHEZY, C. FRASER-LIGGETT and Patricia J. JOHNSON. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science. 2007, vol. 315, No 5809, p. 207-212. ISSN 0036-8075.
Name in Czech: Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
Name (in English): Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
RIV/00216224:14310/07:00036232 Article in a journal. Genetics and molecular biology. English. United States of America.
Carlton, Jane (826 United Kingdom of Great Britain and Northern Ireland) -- Hirt, R.P. (756 Switzerland) -- Silva, J.C. (620 Portugal) -- Delcher, A.L. (840 United States of America) -- Schatz, M. (276 Germany) -- Zhao, Q. (156 China) -- Wortman, J.R. (840 United States of America) -- Bidwell, S.L. (840 United States of America) -- Alsmark, U.C. (826 United Kingdom of Great Britain and Northern Ireland) -- Besteiro, S. (826 United Kingdom of Great Britain and Northern Ireland) -- Sicheritz-Ponten, T. (208 Denmark) -- Noel, C.J. (250 France) -- Dacks, J.B. (124 Canada) -- Foster, P.G. (826 United Kingdom of Great Britain and Northern Ireland) -- Simillion, C. (56 Belgium) -- Van de Peer, Y. (56 Belgium) -- Miranda-Saavedra, D. (826 United Kingdom of Great Britain and Northern Ireland) -- Barton, G.J. (826 United Kingdom of Great Britain and Northern Ireland) -- Westrop, G.D. (826 United Kingdom of Great Britain and Northern Ireland) -- Muller, S. (276 Germany) -- Dessi, D. (380 Italy) -- Fiori, P.L. (380 Italy) -- Ren, Q. (840 United States of America) -- Paulsen, I. (840 United States of America) -- Zhang, H. (840 United States of America) -- Bastida-Corcuera, F.D. (724 Spain) -- Simoes-Barbosa, A. (76 Brazil) -- Brown, M.T. (840 United States of America) -- Hayes, R. (840 United States of America) -- Mukherjee, M. (840 United States of America) -- Okumura, C.Y. (840 United States of America) -- Schneider, R. (840 United States of America) -- Smith, A.J. (840 United States of America) -- Vaňáčová, Štěpánka (203 Czech Republic, guarantor) -- Villalvazo, M. (840 United States of America) -- Haas, B.J. (840 United States of America) -- Pertea, M. (840 United States of America) -- Feldblyum, T. (840 United States of America) -- Utterback, T.R. (840 United States of America) -- Shu, Chung-Li (156 China) -- Osoegawa, K. (840 United States of America) -- de Jong, P.J. (840 United States of America) -- Hrdy, Ivan (203 Czech Republic) -- Horvathova, Lenka (203 Czech Republic) -- Zubacova, Zuzana (703 Slovakia) -- Dolezal, Pavel (203 Czech Republic) -- Malik, S.B. (840 United States of America) -- Logsdon, J.Jr. (840 United States of America) -- Henze, K. (276 Germany) -- Gupta, A. (840 United States of America) -- Wang, C.C. (840 United States of America) -- Dunne, R.L. (840 United States of America) -- Upcroft, J.A. (36 Australia) -- Upcroft, Peter (36 Australia) -- White, Owen (840 United States of America) -- Salzberg, S.L. (840 United States of America) -- Tang, P. (158 Taiwan) -- Chiu, Cheng-Hsun (158 Taiwan) -- Lee, Ying-Shiung (158 Taiwan) -- Embley, T.M. (826 United Kingdom of Great Britain and Northern Ireland) -- Coombs, G.H. (826 United Kingdom of Great Britain and Northern Ireland) -- Mottram, J.C. (826 United Kingdom of Great Britain and Northern Ireland) -- Tachezy, Jan (203 Czech Republic) -- Fraser-Liggett, C. (840 United States of America) -- Johnson, Patricia J. (840 United States of America)
Keywords in English: Trichomonas; genome; protozoa; transposon elements; hydrogenosome: mitochondria
International impact: yes
Reviewed: yes
Changed by: prof. Mgr. Štěpánka Vaňáčová, Ph.D., učo 105562. Changed: 29/3/2010 15:39.
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