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    2024

    1. A sodium/potassium switch for G4-prone G/C-rich sequences
      LUO, Yu, Martina LENARČIČ ŽIVKOVIC, Jiawei WANG, Jan RYNEŠ, Silvie TRANTÍRKOVÁ, Lukáš TRANTÍREK, Daniela VERGA and Jean-Louis MERGNY. A sodium/potassium switch for G4-prone G/C-rich sequences. Nucleic acids research. Oxford: Oxford University Press, 2024, vol. 52, No 1, p. 448-461. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1073.
      More: https://is.muni.cz/publication/2372118/en
    2. In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells
      VÍŠKOVÁ, Pavlína, Eva IŠTVÁNKOVÁ, Jan RYNEŠ, Šimon DŽATKO, Tomáš LOJA, Martina LENARČIČ ŽIVKOVIC, Riccardo RIGO, Roberto EL-KHOURY, Israel SERRANO-CHACON, Masad J DAMHA, Carlos GONZALEZ, Jean-Louis MERGNY, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells. Nature Communications. Berlin: Nature, 2024, vol. 15, No 1, 12 pp. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-024-46221-y.
      More: https://is.muni.cz/publication/2409818/en
    3. Structural Optimization of Azacryptands for Targeting Three-Way DNA Junctions
      PIPIER, Angélique, Titouan CHETOT, Apollonia KALAMATIANOU, Nicolas MARTIN, Maëlle CAROFF, Sébastien BRITTON, Nicolas CHÉRON, Lukáš TRANTÍREK, Anton GRANZHAN and David MONCHAUD. Structural Optimization of Azacryptands for Targeting Three-Way DNA Junctions. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. WEINHEIM: WILEY-V C H VERLAG GMBH, 2024. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202409780.
      More: https://is.muni.cz/publication/2414757/en

    2023

    1. A thermosensitive gel matrix for bioreactor-assisted in-cell NMR of nucleic acids and proteins
      DZUROV, Matej, Šárka POSPÍŠILOVÁ, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, Lucy VOJTOVÁ and Jan RYNEŠ. A thermosensitive gel matrix for bioreactor-assisted in-cell NMR of nucleic acids and proteins. Journal of biomolecular NMR. Dordrecht: Springer, 2023, vol. 77, 5-6, p. 203-215. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-023-00422-7.
      More: https://is.muni.cz/publication/2339524/en
    2. Acute myeloid leukemia suppression by palbociclib and ponatinib in patient-derived xenograft.
      BUŠA, Daniel, Martin ČULEN, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, Alois FOLTA and Jiří MAYER. Acute myeloid leukemia suppression by palbociclib and ponatinib in patient-derived xenograft. In 23. Pražské hematologické dny, Praha. 2023.
      More: https://is.muni.cz/publication/2251881/en
    3. Biomaterial selection does not affect AML engraftment in humanized ossicles. (Biomaterial selection does not affect AML engraftment in humanized ossicles - conference abstract.)
      ČULEN, Martin, Tomáš LOJA, Daniel BUŠA, Zdeňka HERUDKOVÁ, Jan HÝL, Jakub VLAŽNÝ, K. LIŠKOVÁ, Martin REPKO, Lucy VOJTOVÁ and Jiří MAYER. Biomaterial selection does not affect AML engraftment in humanized ossicles. (Biomaterial selection does not affect AML engraftment in humanized ossicles - conference abstract.). In 12th International Conference Analytical Cytometry, Praha. 2023.
      More: https://is.muni.cz/publication/2309658/en
    4. CCL2/MCP-1, interleukin-8, and fractalkine/CXC3CL1: Potential biomarkers of epileptogenesis and pharmacoresistance in childhood epilepsy
      ČESKÁ, Katarína, Jan PAPEŽ, Hana OŠLEJŠKOVÁ, Ondřej SLABÝ, Lenka RADOVÁ, Tomáš LOJA, Zuzana LIBÁ, Anna SVĚRÁKOVÁ, Milan BRÁZDIL and Štefánia AULICKÁ. CCL2/MCP-1, interleukin-8, and fractalkine/CXC3CL1: Potential biomarkers of epileptogenesis and pharmacoresistance in childhood epilepsy. EUROPEAN JOURNAL OF PAEDIATRIC NEUROLOGY. OXON: ELSEVIER, 2023, vol. 46, September 2023, p. 48-54. ISSN 1090-3798. Available from: https://dx.doi.org/10.1016/j.ejpn.2023.06.001.
      More: https://is.muni.cz/publication/2298457/en
    5. Coculture model with CD40L, IL4 and IL21 for study chronic lymphocytic leukemia proliferation.
      HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Jan VERNER, Miroslav BOUDNÝ, Gabriela MLADONICKÁ PAVLASOVÁ, Tomáš LOJA, Daniel FILIP, Josef VEČEŘA, Květoslava MATULOVÁ, Hana SKUHROVÁ FRANCOVÁ, Sonali SHARMA, Laura ONDRIŠOVÁ, Veronika PALUŠOVÁ, Lucy VOJTOVÁ, Leoš KŘEN, Michael DOUBEK and Marek MRÁZ. Coculture model with CD40L, IL4 and IL21 for study chronic lymphocytic leukemia proliferation. In CEITEC PhD Conference 2023, Brno. 2023.
      More: https://is.muni.cz/publication/2360009/en
    6. Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry
      KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Nicola SALVI, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE and Fabien FERRAGE. Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry. In IDP Community F2F/hybrid meeting. 2023.
      More: https://is.muni.cz/publication/2386899/en
    7. Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry
      ZAPLETAL, Vojtěch, Nicola SALVI, Andrea FLAMM, Zuzana JASEŇÁKOVÁ, Dennis KURZBACH, Mateos BORJA, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Jozef HRITZ, Robert KONRAT, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry. 2023.
      More: https://is.muni.cz/publication/2386900/en
    8. DNA i-motif formation at neutral pH is driven by kinetic partitioning
      ŠKOLÁKOVÁ, Petra, Martin GAJARSKÝ, Jan PALACKÝ, Denis ŠUBERT, Daniel RENČIUK, Lukáš TRANTÍREK, Jean-Louis MERGNY and Michaela VORLICKOVA. DNA i-motif formation at neutral pH is driven by kinetic partitioning. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2950-2962. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad119.
      More: https://is.muni.cz/publication/2302402/en
    9. Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation
      TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation. In Inaugural Biochemistry Symposium Puzzles of (Bio)molecular Structure and Dynamics: NMR spectroscopy and complementary approaches. 2023.
      More: https://is.muni.cz/publication/2291213/en
    10. Functional analysis of LDLR variants using flow cytometry
      KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry. In ASHG Annual Meeting 2023. 2023.
      More: https://is.muni.cz/publication/2379177/en
    11. Functional analysis of LDLR variants using flow cytometry and western blot
      KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry and western blot. In XXII. setkání biochemiků a molekulárních biologů. 2023.
      More: https://is.muni.cz/publication/2379179/en
    12. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation.
      DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.
      More: https://is.muni.cz/publication/2356319/en
    13. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation in rituximab-resistant cells.
      DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation in rituximab-resistant cells. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.
      More: https://is.muni.cz/publication/2357980/en
    14. Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis
      TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis. In 19th European Magnetic Resonance Congress, EUROMAR 2023. 2023.
      More: https://is.muni.cz/publication/2303698/en
    15. Characterisation of Macrophage Response to Nickel Nanoparticles and Ions Released from Biomaterials
      NAVRÁTILOVÁ, Polina, Jan EMMER, Tomáš LOJA and Monika PÁVKOVÁ GOLDBERGOVÁ. Characterisation of Macrophage Response to Nickel Nanoparticles and Ions Released from Biomaterials. In MATEDAS 2023, 17th INTERNATIONAL CONFERENCE ON MATERIALS AND TECHNOLOGIES FOR DEFENSE AND SECURITY. 2023.
      More: https://is.muni.cz/publication/2286997/en
    16. Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis
      TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžbeta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis. Proteins: Structure, Function and Bioinformatics. Wiley, 2023, vol. 91, No 9, p. 1276-1287. ISSN 0887-3585. Available from: https://dx.doi.org/10.1002/prot.26531.
      More: https://is.muni.cz/publication/2296078/en
    17. Identification of novel targets that upregulate CD20 expression in rituximab-resistant cells with the use of genomewide CRISPR screening.
      DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Identification of novel targets that upregulate CD20 expression in rituximab-resistant cells with the use of genomewide CRISPR screening. In XX. International Workshop on CLL (iwCLL 2023), Boston, USA. 2023.
      More: https://is.muni.cz/publication/2355945/en
    18. Inhibition of acute myeloid leukemia using palbociclib and ponatinib in a patient-derived xenograft model.
      BUŠA, Daniel, Martin ČULEN, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, Adam FOLTA and Jiří MAYER. Inhibition of acute myeloid leukemia using palbociclib and ponatinib in a patient-derived xenograft model. In Actual Problems of Medical Prevention, Baku, Azerbajdžán. 2023.
      More: https://is.muni.cz/publication/2360051/en
    19. Nanodiamonds as artificial proteins for regulation of a cell signalling system
      CÍGLER, Petr, Lukáš BÁLEK, Jan HAVLÍK, Pavel KREJČÍ, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. Nanodiamonds as artificial proteins for regulation of a cell signalling system. 2023.
      More: https://is.muni.cz/publication/2364737/en
    20. Nanodiamonds as artificial proteins for regulation of a cell signalling system
      CÍGLER, Petr, Lukáš BÁLEK, Jan HAVLÍK, Pavel KREJČÍ, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. Nanodiamonds as artificial proteins for regulation of a cell signalling system. 2023.
      More: https://is.muni.cz/publication/2302565/en
    21. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase
      PAPAGEORGIOU, Anna, Michaela POSPÍŠILOVÁ, Jakub CIBULKA, Raghib ASHRAF, Christopher WAUDBY, Pavel KADEŘÁVEK, Volha MAROZ, Karel KUBÍČEK, Zbyněk PROKOP, Lumír KREJČÍ and Konstantinos TRIPSIANES. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase. Nature Communications. Berlin: Nature, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-42503-z.
      More: https://is.muni.cz/publication/2344400/en
    22. Small RNA Sequencing Identifies a Six-MicroRNA Signature Enabling Classification of Brain Metastases According to their Origin
      ROŠKOVÁ, Ivana, Marek VEČEŘA, Lenka RADOVÁ, Karolína TRACHTOVÁ, František SIEGL, Markéta HERMANOVÁ, Michal HENDRYCH, Leoš KŘEN, Václav VYBÍHAL, Hana VALEKOVÁ, Petra KASPAROVA, Ivana KOLOUŠKOVÁ, Tomáš KAZDA, Ondřej SLABÝ, Radim JANČÁLEK, Jiří ŠÁNA and Martin SMRČKA. Small RNA Sequencing Identifies a Six-MicroRNA Signature Enabling Classification of Brain Metastases According to their Origin. CANCER GENOMICS & PROTEOMICS. ATHENS: INT INST ANTICANCER RESEARCH, 2023, vol. 20, No 1, p. 18-29. ISSN 1109-6535. Available from: https://dx.doi.org/10.21873/cgp.20361.
      More: https://is.muni.cz/publication/2293483/en
    23. Spinal Metastasis in a Patient with Supratentorial Glioblastoma with Primitive Neuronal Component: A Case Report with Clinical and Molecular Evaluation
      HENDRYCH, Michal, Peter SOLÁR, Markéta HERMANOVÁ, Ondřej SLABÝ, Hana VALEKOVÁ, Marek VEČEŘA, Alena KOPKOVÁ, Zdeněk MACKERLE, Tomáš KAZDA, Petr POSPÍŠIL, Radek LAKOMÝ, Jan CHRASTINA, Jiří ŠÁNA and Radim JANČÁLEK. Spinal Metastasis in a Patient with Supratentorial Glioblastoma with Primitive Neuronal Component: A Case Report with Clinical and Molecular Evaluation. Diagnostics. Basel: MDPI, 2023, vol. 13, No 2, p. 1-14. ISSN 2075-4418. Available from: https://dx.doi.org/10.3390/diagnostics13020181.
      More: https://is.muni.cz/publication/2246988/en
    24. Study of the Dynamics of Flexible Subunits of RNA Polymerase from Bacillus subtilis
      TUŽINČIN, Dávid, Nicola SALVI, Vojtěch ZAPLETAL, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Study of the Dynamics of Flexible Subunits of RNA Polymerase from Bacillus subtilis. 2023.
      More: https://is.muni.cz/publication/2386901/en
    25. The role of casein kinase 1 inhibition in treatment of chronic lymphocytic leukemia.
      MIKULOVÁ, Antónia, Pavlína JANOVSKÁ, Jan VERNER, Hana PLEŠINGEROVÁ, Olga VONDÁLOVÁ BLANÁŘOVÁ, Pavlína KEBKOVÁ, Kateřina SOTOLÁŘOVÁ, Jana BARTOŠÍKOVÁ, M. CHORVÁTOVÁ, Terézia KURUCOVÁ, Tomáš LOJA, Boris TICHÝ, Lukáš KUBALA and Vítězslav BRYJA. The role of casein kinase 1 inhibition in treatment of chronic lymphocytic leukemia. In 12th International Conference Analytical Cytometry, Praha. 2023.
      More: https://is.muni.cz/publication/2309657/en
    26. Tumor tissue and cerebrospinal fluid microRNA profiles enable the classification of brain metastasis accordingly to their origin
      AL TUKMACHI, Dagmar, Michaela RUČKOVÁ, Marek VEČEŘA, Táňa MACHÁČKOVÁ, Petra POKORNÁ, Markéta HERMANOVÁ, Michal HENDRYCH, Leoš KŘEN, Ivana ROŠKOVÁ, Václav VYBÍHAL, Hana VALEKOVÁ, Radim JANČÁLEK, Jiří ŠÁNA, Martin SMRČKA and Ondřej SLABÝ. Tumor tissue and cerebrospinal fluid microRNA profiles enable the classification of brain metastasis accordingly to their origin. In AACR Annual Meeting 2023; April 14-19, 2023; Orlando, FL. 2023. Available from: https://dx.doi.org/10.1158/1538-7445.AM2023-3758.
      More: https://is.muni.cz/publication/2420962/en

    2022

    1. Bio-dekontaminačná komora na báze plazmou aktivovaného dekontaminačného média (Bio-decontamination chamber using plasma-activated decontamination media)
      KELAR TUČEKOVÁ, Zlata, Michal PAZDERKA, Lukáš VACEK, Filip RŮŽIČKA, Mirko ČERNÁK, Jakub KELAR, Jaromír HAŠANA, Dušan KOVÁČIK, Eliška KOSTRŮNKOVÁ and Lenka SMÍLKOVÁ. Bio-dekontaminačná komora na báze plazmou aktivovaného dekontaminačného média (Bio-decontamination chamber using plasma-activated decontamination media). 2022.
      More: https://is.muni.cz/publication/2239418/en
    2. Fluorine Labeling as a Versatile Tool for Probing Nucleic Acid Folding and Interactions by NMR Spectroscopy
      ZLÍNSKÁ, Vladimíra, Vaclav MATOUSEK, Lukáš TRANTÍREK and Riccardo RIGO. Fluorine Labeling as a Versatile Tool for Probing Nucleic Acid Folding and Interactions by NMR Spectroscopy. ALDRICHIMICA ACTA. UNITED STATES: ALDRICH CHEMICAL CO INC, 2022, vol. 55, No 2, p. 45-52. ISSN 0002-5100.
      More: https://is.muni.cz/publication/2264613/en
    3. GAB1 as novel therapeutic target in B lymphoid and myeloid malignancies
      ŠEDA, Václav, Eva VOJÁČKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Tomáš LOJA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, S. ZHANG, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. GAB1 as novel therapeutic target in B lymphoid and myeloid malignancies. In XXXIV. Olomoucké hematologické dny in Transfuze a hematologie dnes. 2022.
      More: https://is.muni.cz/publication/2239823/en
    4. Optimization of plasma-activated media generation for decontamination of thermally sensitive materials
      KELAR TUČEKOVÁ, Zlata, Lukáš VACEK, Michal PAZDERKA, Eliška KOSTRŮNKOVÁ, Lenka SMÍLKOVÁ, Jakub KELAR, Jaromír HAŠANA, Filip RŮŽIČKA and Mirko ČERNÁK. Optimization of plasma-activated media generation for decontamination of thermally sensitive materials. In 9th Central European Symposium on Plasma Chemistry (CESPC-9) joint with COST Action CA19110 Plasma Applications for Smart and Sustainable Agriculture (PlAgri). 2022. ISBN 978-80-8147-115-5.
      More: https://is.muni.cz/publication/2222658/en
    5. Polymorphic and Higher-Order G-Quadruplexes as Possible Transcription Regulators: Novel Perspectives for Future Anticancer Therapeutic Applications
      RIGO, Riccardo, Elisabetta GROAZ and Claudia SISSI. Polymorphic and Higher-Order G-Quadruplexes as Possible Transcription Regulators: Novel Perspectives for Future Anticancer Therapeutic Applications. PHARMACEUTICALS. BASEL, SWITZERLAND: MDPI, 2022, vol. 15, No 3, p. 373-385. ISSN 1424-8247. Available from: https://dx.doi.org/10.3390/ph15030373.
      More: https://is.muni.cz/publication/2240876/en
    6. Sekvenování dlouhých nekódujících RNA v exozomech u pacientů s kolorektálním karcinomem (Sequencing of long non-coding RNAs in exosomes of colorectal cancer patients)
      MĄDRZYK, Marie, Táňa MACHÁČKOVÁ, Karolína TRACHTOVÁ, Tina Catela IVKOVIĆ, Kamila SOUČKOVÁ, Jan KOTOUČEK, Josef MAŠEK, Tomáš LOJA, Milana ŠACHLOVÁ and Ondřej SLABÝ. Sekvenování dlouhých nekódujících RNA v exozomech u pacientů s kolorektálním karcinomem (Sequencing of long non-coding RNAs in exosomes of colorectal cancer patients). Klinická onkologie. Praha: Česká lékařská společnost J. E. Purkyně, 2022, vol. 35, Supplementum 1, p. "S138"-"S141", 3 pp. ISSN 0862-495X. Available from: https://dx.doi.org/10.48095/ccko20221S107.
      More: https://is.muni.cz/publication/2233296/en
    7. Versatile coculture systém to study chronic lymhocytic leukemia proliferation.
      HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Tomáš LOJA, Gabriela MLADONICKÁ PAVLASOVÁ, Jan VERNER, Václav CHOCHOLA, Josef JAROŠ, Květoslava LIŠKOVÁ, Daniel FILIP, Josef VEČEŘA, Pedro FARIA ZENI, Jana DORAZILOVÁ, Eva ONDROUŠKOVÁ, Laura ONDRIŠOVÁ, Miroslav BOUDNÝ, Leoš KŘEN, Lucy VOJTOVÁ, Jiří MAYER and Marek MRÁZ. Versatile coculture systém to study chronic lymhocytic leukemia proliferation. In CEITEC PhD Conference, Brno. 2022.
      More: https://is.muni.cz/publication/2233307/en

    2021

    1. Acute myeloid leukemia regression induced by palbociclib and ponatinib in patient –derived xenograft model.
      BUŠA, Daniel, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, A. FOLTA, Jiří MAYER and Martin ČULEN. Acute myeloid leukemia regression induced by palbociclib and ponatinib in patient –derived xenograft model. In Analytická cytometrie XI. 2021.
      More: https://is.muni.cz/publication/1830794/en
    2. Detekce transpozibilních elementů u hematologických malignit.
      PLEVOVÁ, Karla, Šárka PAVLOVÁ, Anastasiya VOLAKHAVA, Marcela KRZYŽÁNKOVÁ, Hana SYNÁČKOVÁ, Hana JELÍNKOVÁ, Marcela ŽENATOVÁ, Michaela BOHÚNOVÁ, Tomáš LOJA, Michael DOUBEK, Libor ČERVINEK, Jana KOTAŠKOVÁ, Jiří MAYER, Šárka POSPÍŠILOVÁ and Ilgar MAMEDOV. Detekce transpozibilních elementů u hematologických malignit. In II. Český hematologický a transfuziologický sjezd v Transfuze a Hematologie Dnes (2021). 2021.
      More: https://is.muni.cz/publication/1812427/en
    3. Disruption of NAP1 genes in Arabidopsis thaliana suppresses the fas1 mutant phenotype, enhances genome stability and changes chromatin compaction
      KOLÁŘOVÁ, Karolína, Martina NEŠPOR DADEJOVÁ, Tomáš LOJA, Gabriela LOCHMANOVÁ, Eva SÝKOROVÁ and Martina DVOŘÁČKOVÁ. Disruption of NAP1 genes in Arabidopsis thaliana suppresses the fas1 mutant phenotype, enhances genome stability and changes chromatin compaction. The Plant Journal. Blackwell Science, 2021, vol. 106, No 1, p. 56-73. ISSN 0960-7412. Available from: https://dx.doi.org/10.1111/tpj.15145.
      More: https://is.muni.cz/publication/1826514/en
    4. FoxO1-GAB1 axis regulates homing capacity and tonic AKT activity in chronic lymphocytic leukemia
      ŠEDA, Václav, Eva VOJÁČKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Sonali SHARMA, Tomáš LOJA, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel ZICHA, Marie KUDLIČKOVÁ PEŠKOVÁ, Jan KŘIVÁNEK, Květoslava MATULOVÁ, Leoš KŘEN, V. BENES, Markéta LITZMANOVÁ, Marek BORSKÝ, Jan OPPELT, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, Z. TAN, S.X. ZHANG, Michael DOUBEK, Kateřina AMRUZ ČERNÁ, Jiří MAYER and Marek MRÁZ. FoxO1-GAB1 axis regulates homing capacity and tonic AKT activity in chronic lymphocytic leukemia. Blood. Washington DC, USA: American Society of Hematology, 2021, vol. 138, No 9, p. 758-772. ISSN 0006-4971. Available from: https://dx.doi.org/10.1182/blood.2020008101.
      More: https://is.muni.cz/publication/1813384/en
    5. FoxO1-GAB1 Axis Regulates Homing Capacity and Tonic AKT Activity in Chronic Lymphocytic Leukemia: Novel Therapeutic Target.
      ŠEDA, Václav, E. VOJÁČKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Sonali SHARMA, Tomáš LOJA, Daniel ZICHA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, Zhuowen TAN, Shelley ZHANG, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. FoxO1-GAB1 Axis Regulates Homing Capacity and Tonic AKT Activity in Chronic Lymphocytic Leukemia: Novel Therapeutic Target. In 26th Congress of the European Hematology Association, červen 2021 in HemaSphere. 2021.
      More: https://is.muni.cz/publication/1830658/en
    6. GAB1 – novel regulator of migration capacity and tonic AKT activity in CLL: Implications for combinatorial therapy with BCR inhibitors.
      ŠEDA, Václav, Eva HOFERKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Sonali SHARMA, Tomáš LOJA, Daniel ZICHA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. GAB1 – novel regulator of migration capacity and tonic AKT activity in CLL: Implications for combinatorial therapy with BCR inhibitors. In XIX International Workshop on Chronic Lymphocytic Leukemia (iwCLL). 2021.
      More: https://is.muni.cz/publication/1830661/en
    7. GAB1 Regulates homing capacity and tonic AKT activity in chronic lymphocytic leukemia: novel therapeutic target
      MRÁZ, Marek, Václav ŠEDA, Eva HOFERKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Sonali SHARMA, Tomáš LOJA, Daniel ZICHA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, Michael DOUBEK and Jiří MAYER. GAB1 Regulates homing capacity and tonic AKT activity in chronic lymphocytic leukemia: novel therapeutic target. In XXVI. CSBMB 2021. 2021.
      More: https://is.muni.cz/publication/1811797/en
    8. GAB1 reguluje tonickou AKT signalizaci a migraci buněk chronické lymfatické leukémie: implikace pro kombinační léčbu s BCR inhibitory.
      ŠEDA, Václav, Eva VOJÁČKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Sonali SHARMA, Tomáš LOJA, D. ZICHA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, Zhuowen TAN, Shelley ZHANG, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. GAB1 reguluje tonickou AKT signalizaci a migraci buněk chronické lymfatické leukémie: implikace pro kombinační léčbu s BCR inhibitory. In II. Český hematologický a transfuziologický sjezd v Transfuze a Hematologie Dnes (2021). 2021.
      More: https://is.muni.cz/publication/1812461/en
    9. G-Quadruplex Formation by DNA Sequences Deficient in Guanines: Two Tetrad Parallel Quadruplexes Do Not Fold Intramolecularly
      KEJNOVSKA, I., P. STADLBAUER, Lukáš TRANTÍREK, D. RENCIUK, Martin GAJARSKÝ, Daniel KRAFČÍK, J. PALACKY, K. BEDNAROVA, J. SPONER, J.L. MERGNY and M. VORLICKOVA. G-Quadruplex Formation by DNA Sequences Deficient in Guanines: Two Tetrad Parallel Quadruplexes Do Not Fold Intramolecularly. Chemistry - A European Journal. WEINHEIM: Wiley, 2021, vol. 27, No 47, p. 12115-12125. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.202100895.
      More: https://is.muni.cz/publication/1831041/en
    10. Hierarchical distribution of somatic variants in newly diagnosed chronic myeloid leukaemia at diagnosis and early follow-up
      ROMŽOVÁ, Marianna, Dagmar SMITALOVÁ, Jakub HYNŠT, Nikola TOM, Tomáš LOJA, Zdeňka HERUDKOVÁ, Tomáš JURČEK, Lukas STEJSKAL, Daniela ŽÁČKOVÁ, Jiří MAYER, Zdeněk RÁČIL and Martin ČULEN. Hierarchical distribution of somatic variants in newly diagnosed chronic myeloid leukaemia at diagnosis and early follow-up. British journal of haematology. Hoboken: Wiley-Blackwell, 2021, vol. 194, No 3, p. 604-612. ISSN 0007-1048. Available from: https://dx.doi.org/10.1111/bjh.17659.
      More: https://is.muni.cz/publication/1786441/en
    11. Hypermethylation of CD19 promoter enables antigen-negative escape to CART-19 in vivo and in vitro
      LEDEREROVÁ, Aneta, Lenka DOSTÁLOVÁ, Veronika KOZLOVÁ, Helena PESCHELOVÁ, Adriana LADUNGOVÁ, Martin ČULEN, Tomáš LOJA, Jan VERNER, Šárka POSPÍŠILOVÁ, Michal ŠMÍDA and Veronika MANČÍKOVÁ. Hypermethylation of CD19 promoter enables antigen-negative escape to CART-19 in vivo and in vitro. Journal for ImmunoTherapy of Cancer. Switzerland: Springer International Publishing AG, 2021, vol. 9, No 8, p. 1-8. ISSN 2051-1426. Available from: https://dx.doi.org/10.1136/jitc-2021-002352.
      More: https://is.muni.cz/publication/1813004/en
    12. In vivo antigen-negative escape to CART-19 caused by CD19 promotor hypermethylation.
      DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Veronika KOZLOVÁ, Helena PESCHELOVÁ, Adriana LADUNGOVÁ, Tomáš LOJA, Jan VERNER, Šárka POSPÍŠILOVÁ, Veronika MANČÍKOVÁ and Michal ŠMÍDA. In vivo antigen-negative escape to CART-19 caused by CD19 promotor hypermethylation. In II. Český hematologický a transfuziologický sjezd v Transfuze a Hematologie Dnes (2021). 2021.
      More: https://is.muni.cz/publication/1811812/en
    13. In-Cell NMR Spectroscopy of Functional Riboswitch Aptamers in Eukaryotic Cells
      BROFT, P., Šimon DŽATKO, Michaela KRAFČÍKOVÁ, A. WACKER, Robert HANSEL-HERTSCH, Volker DOTSCH, Lukáš TRANTÍREK and Harald SCHWALBE. In-Cell NMR Spectroscopy of Functional Riboswitch Aptamers in Eukaryotic Cells. Angewandte Chemie International Edition. Weinheim: Wiley-VCH Verlag, 2021, vol. 60, No 2, p. 865-872. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202007184.
      More: https://is.muni.cz/publication/1726480/en
    14. Insight into formation propensity of pseudocircular DNA G-hairpins
      LENARČIČ ŽIVKOVIĆ, Martina, Martin GAJARSKÝ, Kateřina BEKOVÁ, P. STADLBAUER, Lukáš VICHEREK, M. PETROVA, Radovan FIALA, I. ROSENBERG, Jiří ŠPONER, J. PLAVEC and Lukáš TRANTÍREK. Insight into formation propensity of pseudocircular DNA G-hairpins. Nucleic acids research. Oxford: Oxford University Press, 2021, vol. 49, No 4, p. 2317-2332. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkab029.
      More: https://is.muni.cz/publication/1831038/en
    15. Palbociclib and ponatinib induce regression of acute myeloid leukemia in patient-derived xenograft model.
      BUŠA, Daniel, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, Adam FOLTA, Jiří MAYER and Martin ČULEN. Palbociclib and ponatinib induce regression of acute myeloid leukemia in patient-derived xenograft model. In II. Český hematologický a transfuziologický sjezd v Transfuze a Hematologie Dnes (2021). 2021.
      More: https://is.muni.cz/publication/1811840/en
    16. Patient-derived Xenograft Model of Chronic Lymphocytic Leukaemia Based on Mimicking Its Microenvironment.
      VOJÁČKOVÁ, E., Jan VERNER, K. LIŠKOVÁ, Václav ŠEDA, Tomáš LOJA, Gabriela MLADONICKÁ PAVLASOVÁ, Daniel FILIP, Sonali SHARMA, Jana DORAZILOVÁ, Hana SKUHROVÁ FRANCOVÁ, Josef VEČEŘA, Laura ONDRIŠOVÁ, Veronika ŠANDOVÁ, Pedro FARIA ZENI, Lenka KOŠŤÁLOVÁ, Miroslav BOUDNÝ, Michaela MEDKOVÁ, Lucy VOJTOVÁ, Leoš KŘEN, Jiří MAYER and Marek MRÁZ. Patient-derived Xenograft Model of Chronic Lymphocytic Leukaemia Based on Mimicking Its Microenvironment. In Ceitec PhD Conference. 2021.
      More: https://is.muni.cz/publication/1830664/en
    17. Thermal and pH stabilities of i‐DNA: confronting in vitro experiments with models and in‐cell NMR data
      CHENG, Mingpan, Dehui QIU, Liezel TAMON, Eva IŠTVÁNKOVÁ, Pavlína VÍŠKOVÁ, Samir AMRANE, Aurore GUÉDIN, Jielin CHEN, Laurent LACROIX, Huangxian JU, Lukáš TRANTÍREK, Aleksandr B. SAHAKYAN, Jun ZHOU and Jean-Louis MERGNY. Thermal and pH stabilities of i‐DNA: confronting in vitro experiments with models and in‐cell NMR data. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. Wiley-VCH Verlag GmbH, 2021, vol. 60, No 18, p. 10286-10294. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202016801.
      More: https://is.muni.cz/publication/1754819/en
    18. Towards Profiling of the G-Quadruplex Targeting Drugs in the Living Human Cells Using NMR Spectroscopy
      KRAFČÍK, Daniel, Eva IŠTVÁNKOVÁ, Šimon DŽATKO, Pavlína VÍŠKOVÁ, S. FOLDYNOVA-TRANTIRKOVA and Lukáš TRANTÍREK. Towards Profiling of the G-Quadruplex Targeting Drugs in the Living Human Cells Using NMR Spectroscopy. International Journal of Molecular Sciences. Basel: Multidisciplinary Digital Publishing Institute, 2021, vol. 22, No 11, p. 6042-6055. ISSN 1422-0067. Available from: https://dx.doi.org/10.3390/ijms22116042.
      More: https://is.muni.cz/publication/1838631/en

    2020

    1. Clonal hierarchy of main molecular lesions in acute myeloid leukaemia
      HERUDKOVÁ, Zdeňka, Martin ČULEN, Adam FOLTA, Ivana JEŽÍŠKOVÁ, Jana CERNA, Tomáš LOJA, Nikola TOM, Jiri SMEJKAL, Lukáš SEMERÁD, Dana DVOŘÁKOVÁ, Jiří MAYER and Zdeněk RÁČIL. Clonal hierarchy of main molecular lesions in acute myeloid leukaemia. British journal of haematology. Hoboken: Wiley-Blackwell, 2020, vol. 190, No 4, p. 562-572. ISSN 0007-1048. Available from: https://dx.doi.org/10.1111/bjh.16341.
      More: https://is.muni.cz/publication/1660276/en
    2. Composite 5-methylations of cytosines modulate i-motif stability in a sequence-specific manner: Implications for DNA nanotechnology and epigenetic regulation of plant telomeric DNA
      ŠKOLÁKOVÁ, Petra, Zahra BADRI, Silvie TRANTÍRKOVÁ, Jan RYNEŠ, Jiří ŠPONER, Miloslava FOJTOVÁ, Jiří FAJKUS, Radek MAREK, Michaela VORLÍČKOVÁ, Jean-Louis MERGNY and Lukáš TRANTÍREK. Composite 5-methylations of cytosines modulate i-motif stability in a sequence-specific manner: Implications for DNA nanotechnology and epigenetic regulation of plant telomeric DNA. BBA - General Subjects. Elsevier B.V., 2020, vol. 1864, No 9, p. 129651-129659. ISSN 0304-4165. Available from: https://dx.doi.org/10.1016/j.bbagen.2020.129651.
      More: https://is.muni.cz/publication/1663196/en
    3. Development of novel patient-derived xenograft model of chronic lymphocytic leukemia.
      VOJÁČKOVÁ, Eva, Jan VERNER, Květoslava LIŠKOVÁ, Jana DORAZILOVÁ, Hana SKUHROVÁ FRANCOVÁ, Tomáš LOJA, Václav ŠEDA, Veronika ŠANDOVÁ, Gabriela MLADONICKÁ PAVLASOVÁ, Sonali SHARMA, Pedro FARIA ZENI, Daniel FILIP, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Lucy VOJTOVÁ, Leoš KŘEN and Marek MRÁZ. Development of novel patient-derived xenograft model of chronic lymphocytic leukemia. In CEITEC PhD Conference, Brno, únor 2020. 2020.
      More: https://is.muni.cz/publication/1730978/en
    4. Dual Targeting of BRAF and mTOR Signaling in Melanoma Cells with Pyridinyl Imidazole Compounds
      PALUŠOVÁ, Veronika, Tereza RENZOVÁ, Amandine VERLANDE, Tereza VACLOVÁ, Michaela MEDKOVÁ, Linda CETLOVÁ, Miroslava SEDLÁČKOVÁ, Hana HŘÍBKOVÁ, Iva SLANINOVÁ, Miriama KRUTÁ, Vladimír ROTREKL, Hana UHLIROVA, Aneta KRIZOVA, Radim CHMELIK, Pavel VESELY, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, Kay Oliver SCHINK and Stjepan ULDRIJAN. Dual Targeting of BRAF and mTOR Signaling in Melanoma Cells with Pyridinyl Imidazole Compounds. Cancers. BASEL: MDPI, 2020, vol. 12, No 6, p. 1-24. ISSN 2072-6694. Available from: https://dx.doi.org/10.3390/cancers12061516.
      More: https://is.muni.cz/publication/1673179/en
    5. Elucidation of protein interactions necessary for the maintenance of the BCR-ABL signaling complex
      GREGOR, Tomáš, Michaela BOSÁKOVÁ, Alexandru NITĂ, Sara POOVAKULATHU ABRAHAM, Bohumil FAFÍLEK, Nicole ČERNOHORSKÁ, Jan RYNEŠ, Silvie TRANTÍRKOVÁ, Daniela ŽÁČKOVÁ, Jiří MAYER, Lukáš TRANTÍREK and Pavel KREJČÍ. Elucidation of protein interactions necessary for the maintenance of the BCR-ABL signaling complex. Cellular and molecular life sciences. BASEL: SPRINGER BASEL AG, 2020, vol. 77, No 19, p. 3885-3903. ISSN 1420-682X. Available from: https://dx.doi.org/10.1007/s00018-019-03397-7.
      More: https://is.muni.cz/publication/1681537/en
    6. HCN Channel Activity Balances Quiescence and Proliferation in Neural Stem Cells and Is a Selective Target for Neuroprotection During Cancer Treatment
      JOHARD, H., A. OMELYANENKO, G. FEI, M. ZILBERTER, Z. DAVE, R. ABU-YOUSSEF, L. SCHMIDT, A. HARISANKAR, C.T. VINCENT, J. WALFRIDSSON, S. NELANDER, T. HARKANY, K. BLOMGREN and Michael ANDÄNG. HCN Channel Activity Balances Quiescence and Proliferation in Neural Stem Cells and Is a Selective Target for Neuroprotection During Cancer Treatment. MOLECULAR CANCER RESEARCH. PHILADELPHIA: AMER ASSOC CANCER RESEARCH, 2020, vol. 18, No 10, p. 1522-1533. ISSN 1541-7786. Available from: https://dx.doi.org/10.1158/1541-7786.MCR-20-0292.
      More: https://is.muni.cz/publication/1748362/en
    7. HERMES - A Software Tool for the Prediction and Analysis of Magnetic-Field-Induced Residual Dipolar Couplings in Nucleic Acids
      GIASSA, Ilektra-Chara, Andrea VAVRINSKÁ, Jiří ZELINKA, Jakub ŠEBERA, Vladimír SYCHROVSKÝ, Rolf BOELENS, Radovan FIALA and Lukáš TRANTÍREK. HERMES - A Software Tool for the Prediction and Analysis of Magnetic-Field-Induced Residual Dipolar Couplings in Nucleic Acids. ChemPlusChem. Weinheim: Wiley - Verlag Chemie, 2020, vol. 85, No 9, p. 2177-2185. ISSN 2192-6506. Available from: https://dx.doi.org/10.1002/cplu.202000505.
      More: https://is.muni.cz/publication/1729960/en
    8. In-cell NMR Spectroscopy of Nucleic Acids
      DŽATKO, Šimon, Radovan FIALA, R. HANSEL-HERTSCH, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. In-cell NMR Spectroscopy of Nucleic Acids. IN-CELL NMR SPECTROSCOPY: FROM MOLECULAR SCIENCES TO CELL BIOLOGY. CAMBRIDGE: ROYAL SOC CHEMISTRY, 2020, vol. 21, No 2020, p. 272-297. ISSN 2044-253X. Available from: https://dx.doi.org/10.1039/9781788013079.
      More: https://is.muni.cz/publication/1752481/en
    9. Low Density Lipoprotein Receptor Variants in the Beta-Propeller Subdomain and Their Functional Impact
      DUŠKOVÁ, Lucie, Lucie NOHELOVÁ, Tomáš LOJA, Jana FIALOVÁ, Petra ZAPLETALOVÁ, Kamila RÉBLOVÁ, Lukáš TICHÝ, Tomáš FREIBERGER and Lenka FAJKUSOVÁ. Low Density Lipoprotein Receptor Variants in the Beta-Propeller Subdomain and Their Functional Impact. Frontiers in Genetics. Laussane: FRONTIERS MEDIA SA, 2020, vol. 11, JUN 2020, p. 1-10. ISSN 1664-8021. Available from: https://dx.doi.org/10.3389/fgene.2020.00691.
      More: https://is.muni.cz/publication/1677117/en
    10. miR-183/96/182 cluster is an important morphogenetic factor targetingPAX6expression in differentiating human retinal organoids
      PEŠKOVÁ, Lucie, Denisa JURČÍKOVÁ, Tereza VÁŇOVÁ, Jan KŘIVÁNEK, Michaela CAPANDOVÁ, Zuzana ŠRÁMKOVÁ, Jana ŠEBESTÍKOVÁ, Magdaléna KOLOUŠKOVÁ, Hana KOTASOVÁ, Libor STREIT and Tomáš BÁRTA. miR-183/96/182 cluster is an important morphogenetic factor targetingPAX6expression in differentiating human retinal organoids. Stem Cells. Hoboken: Wiley-Blackwell, 2020, vol. 38, No 12, p. 1557-1567. ISSN 1066-5099. Available from: https://dx.doi.org/10.1002/stem.3272.
      More: https://is.muni.cz/publication/1682016/en
    11. Možnosti imunomodulační terapie epilepsií.
      AULICKÁ, Štefánia, Zuzana LIBÁ, Katarína ČESKÁ, Jiří ŠÁNA, Tomáš LOJA, Elleni PONECHAL MICHU, Ondřej SLABÝ and Hana OŠLEJŠKOVÁ. Možnosti imunomodulační terapie epilepsií. In Český a slovenský epileptologický sjezd, Ostravice. 2020.
      More: https://is.muni.cz/publication/1744502/en
    12. Multicolor immuno-phenotyping of candidate leukemic stem cell markers in CD34+CD38- chronic myeloid leukemia stem cells.
      ČULEN, Martin, Dagmar SMITALOVÁ, Tomáš LOJA, Jiří MAYER and Marianna ROMŽOVÁ. Multicolor immuno-phenotyping of candidate leukemic stem cell markers in CD34+CD38- chronic myeloid leukemia stem cells. In 20. Pražské hematologické dny (Hematologie 2020), Praha. 2020.
      More: https://is.muni.cz/publication/1689893/en
    13. Performance of anti-CD19 chimeric antigen receptor T cells in genetically defined classes of chronic lymphocytic leukemia
      MANČÍKOVÁ, Veronika, Helena PESCHELOVÁ, Veronika KOZLOVÁ, Aneta LEDEREROVÁ, Adriana LADUNGOVÁ, Jan VERNER, Tomáš LOJA, František FOLBER, Jiří MAYER, Šárka POSPÍŠILOVÁ and Michal ŠMÍDA. Performance of anti-CD19 chimeric antigen receptor T cells in genetically defined classes of chronic lymphocytic leukemia. Journal for ImmunoTherapy of Cancer. Switzerland: Springer International Publishing AG, 2020, vol. 8, No 1, p. 000471-481. ISSN 2051-1426. Available from: https://dx.doi.org/10.1136/jitc-2019-000471.
      More: https://is.muni.cz/publication/1662457/en
    14. Role of folding kinetics of secondary structures in telomeric G-overhangs in the regulation of telomere maintenance inSaccharomyces cerevisiae
      JURIKOVA, K., Martin GAJARSKÝ, M. HAJIKAZEMI, J. NOSEK, K. PROCHAZKOVA, K. PAESCHKE, Lukáš TRANTÍREK and L. TOMASKA. Role of folding kinetics of secondary structures in telomeric G-overhangs in the regulation of telomere maintenance inSaccharomyces cerevisiae. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2020, vol. 295, No 27, p. 8958-8971. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.RA120.012914.
      More: https://is.muni.cz/publication/1724876/en
    15. Role zánětu v etiopatogenezi farmakorezistentní epilepsie a refrakterního status epilepticus. (The role of inflammation in etiopathogenesis of pharmacoresistant epilepsy and refractory status epilepticus)
      AULICKÁ, Štefánia, Katarína ČESKÁ, Jiří ŠÁNA, Tomáš LOJA, Petr JABANDŽIEV, Jan PAPEŽ, Pavlína DANHOFER, Hana VINOHRADSKÁ, Irena DOLEŽALOVÁ, Milan BRÁZDIL, Petr ŠTOURAČ, Hana OŠLEJŠKOVÁ and Ondřej SLABÝ. Role zánětu v etiopatogenezi farmakorezistentní epilepsie a refrakterního status epilepticus. (The role of inflammation in etiopathogenesis of pharmacoresistant epilepsy and refractory status epilepticus). Česká a slovenská neurologie a neurochirurgie. Praha: CZECH MEDICAL SOC, 2020, vol. 83, No 1, p. 8-13. ISSN 1210-7859. Available from: https://dx.doi.org/10.14735/amcsnn20208.
      More: https://is.muni.cz/publication/1629539/en
    16. Structure of a DNA G-Quadruplex Related to Osteoporosis with a G-A Bulge Forming a Pseudo-loop
      LENARČIČ ŽIVKOVIĆ, Martina, J. ROZMAN and J. PLAVEC. Structure of a DNA G-Quadruplex Related to Osteoporosis with a G-A Bulge Forming a Pseudo-loop. MOLECULES. Orlando, Florida: Academic Press, 2020, vol. 25, No 20, p. 4867-4882. ISSN 1420-3049. Available from: https://dx.doi.org/10.3390/molecules25204867.
      More: https://is.muni.cz/publication/1750656/en

    2019

    1. Analysis of gene expression in CD26+ CML leukemic stem cell population.
      SMITALOVÁ, Dagmar, Tomáš LOJA, Martin ČULEN, Zdeňka HERUDKOVÁ, Eva BUDINSKÁ, Jiří MAYER, Zdeněk RÁČIL and Marianna ROMŽOVÁ. Analysis of gene expression in CD26+ CML leukemic stem cell population. In 10th International Conference Analytical Cytometry, Hotel Jizerka, Seč-Ústupky. 2019.
      More: https://is.muni.cz/publication/1613276/en
    2. CdS quantum dots-based immunoassay combined with particle imprinted polymer technology and laser ablation ICP-MS as a versatile tool for protein detection
      VANECKOVA, T., J. BEZDEKOVA, Michaela TVRDOŇOVÁ, M. VLCNOVSKA, V. NOVOTNA, J. NEUMAN, Aneta ŠTOSSOVÁ, Viktor KANICKÝ, V. ADAM, M. VACULOVICOVA and Tomáš VACULOVIČ. CdS quantum dots-based immunoassay combined with particle imprinted polymer technology and laser ablation ICP-MS as a versatile tool for protein detection. Scientific reports. LONDON: NATURE PUBLISHING GROUP, 2019, vol. 9, AUG, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-019-48290-2.
      More: https://is.muni.cz/publication/1636928/en
    3. Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1
      HARNOŠ, Jakub, M.C.A. CANIZAL, Miroslav JURÁSEK, Jitender KUMAR, Cornelia HOLLER, Alexandra SCHAMBONY, Kateřina HANÁKOVÁ, Ondřej BERNATÍK, Zbyněk ZDRÁHAL, Kristína GÖMÖRYOVÁ, Tomáš GYBEĽ, Tomasz Witold RADASZKIEWICZ, Marek KRAVEC, Lukáš TRANTÍREK, Jan RYNEŠ, Zankruti DAVE, Ana Iris FERNANDEZ-LLAMAZARES, Robert VÁCHA, Konstantinos TRIPSIANES, Carsten HOFFMANN and Vítězslav BRYJA. Dishevelled-3 conformation dynamics analyzed by FRET-based biosensors reveals a key role of casein kinase 1. Nature Communications. London: Nature Publishing Group, 2019, vol. 10, APR 18 2019, p. 1-18. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-019-09651-7.
      More: https://is.muni.cz/publication/1529116/en
    4. Electrochemical and Spectral Analysis of Cytosine-rich Nonamers
      TŘÍSKOVÁ, Iveta, Libuše TRNKOVÁ, Iva KEJNOVSKÁ and Michaela VORLÍČKOVÁ. Electrochemical and Spectral Analysis of Cytosine-rich Nonamers. In Tomáš Navrátil, Miroslav Fojta a Karolina Schwarzová. XXXIX. Moderní elektrochemické metody-sborník přednášek. 1st ed. Ústí nad Labem: Srsenová Lenka-Best servis Ústí nad Labem, 2019, p. 209-212. ISBN 978-80-905221-7-6.
      More: https://is.muni.cz/publication/1548577/en
    5. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase
      BOSÁKOVÁ, Michaela, Alexandru NITĂ, Tomáš GREGOR, Miroslav VAŘECHA, Iva GUDERNOVÁ, Bohumil FAFÍLEK, Tomáš BÁRTA, Neha BASHEER, Sara POOVAKULATHU ABRAHAM, Lukáš BÁLEK, Markéta TOMANOVÁ, Jana FIALOVÁ KUČEROVÁ, Juraj BOSÁK, David POTĚŠIL, Jennifer ZIEBA, Jieun SONG, Peter KONIK, Sohyun PARK, Ivan DURAN, Zbyněk ZDRÁHAL, David ŠMAJS, Gert JANSEN, Zheng FU, Hyuk Wan KO, Aleš HAMPL, Lukáš TRANTÍREK, Deborah KRAKOW and Pavel KREJČÍ. Fibroblast growth factor receptor influences primary cilium length through an interaction with intestinal cell kinase. Proceedings of the National Academy of Sciences of the United States of America. WASHINGTON: NATL ACAD SCIENCES, 2019, vol. 116, No 10, p. 4316-4325. ISSN 0027-8424. Available from: https://dx.doi.org/10.1073/pnas.1800338116.
      More: https://is.muni.cz/publication/1531598/en
    6. Gold nanoparticles as labels for immunochemical analysis using laser ablation inductively coupled plasma mass spectrometry
      TVRDOŇOVÁ, Michaela, Marcela VLČNOVSKÁ, Lucie VANICKOVA, Viktor KANICKÝ, Vojtěch ADAM, Lena ASCHER, Norbert JAKUBOWSKI, Markéta VACULOVIČOVÁ and Tomáš VACULOVIČ. Gold nanoparticles as labels for immunochemical analysis using laser ablation inductively coupled plasma mass spectrometry. Analytical and Bioanalytical chemistry. HEIDELBERG: SPRINGER HEIDELBERG, 2019, vol. 411, No 3, p. 559-564. ISSN 1618-2642. Available from: https://dx.doi.org/10.1007/s00216-018-1300-7.
      More: https://is.muni.cz/publication/1512417/en
    7. Human retinal organoids as a tool for investigation of circadian rhythms.
      ŠEBESTÍKOVÁ, Jana, Tereza VÁŇOVÁ, Lucie PEŠKOVÁ, Kateřina KONEČNÁ, Martin VÁCHA, Michael ANDÄNG and Tomáš BÁRTA. Human retinal organoids as a tool for investigation of circadian rhythms. In 8. ročník Stem Cells and Cell Therapy: From Research to Modern Clinical Applications. 2019.
      More: https://is.muni.cz/publication/1609025/en
    8. In Cell NMR Spectroscopy: Investigation of G-Quadruplex Structures Inside Living Xenopus laevis Oocytes
      KRAFČÍKOVÁ, Michaela, R. HANSEL-HERTSCH, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. In Cell NMR Spectroscopy: Investigation of G-Quadruplex Structures Inside Living Xenopus laevis Oocytes. G-QUADRUPLEX NUCLEIC ACIDS: METHODS AND PROTOCOLS. TOTOWA: HUMANA PRESS INC, 2019, vol. 2035, No 2019, p. 397-405. ISSN 1064-3745. Available from: https://dx.doi.org/10.1007/978-1-4939-9666-7_25.
      More: https://is.muni.cz/publication/1643296/en
    9. In-Cell NMR Spectroscopy of Nucleic Acids in Human Cells
      VÍŠKOVÁ, Pavlína, Daniel KRAFČÍK, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. In-Cell NMR Spectroscopy of Nucleic Acids in Human Cells. Current Protocols in Nucleic Acid Chemistry. United States: Wiley-Liss Inc, 2019, vol. 76, No 1, p. 1-14. ISSN 1934-9270. Available from: https://dx.doi.org/10.1002/cpnc.71.
      More: https://is.muni.cz/publication/1643298/en
    10. LA-ICP-MS as a sensitive method for detection of nanoparticle-antibody conjugates in immunochemistry analysis
      VLČNOVSKÁ, Marcela, Michaela KUCHYNKA, Aneta ŠTOSSOVÁ, Hana HOLCOVÁ POLANSKÁ, Marketa VACULOVICOVA, Tomáš VACULOVIČ and Michal MASAŘÍK. LA-ICP-MS as a sensitive method for detection of nanoparticle-antibody conjugates in immunochemistry analysis. Online. In Cerkal, R Belcredi, NB Prokesova, L Pilatova, A. MENDELNET 2019: PROCEEDINGS OF 26TH INTERNATIONAL PHD STUDENTS CONFERENCE. Brno: MENDEL UNIV BRNO, 2019, p. 682-686. ISBN 978-80-7509-688-3.
      More: https://is.muni.cz/publication/1729998/en
    11. Molecularly imprinted polymers coupled to mass spectrometric detection for metallothionein sensing
      VANECKOVA, T., L. VANICKOVA, Michaela TVRDOŇOVÁ, A. POMORSKI, A. KREZEL, Tomáš VACULOVIČ, Viktor KANICKÝ, M. VACULOVICOVA and V. ADAM. Molecularly imprinted polymers coupled to mass spectrometric detection for metallothionein sensing. Talanta. AMSTERDAM: Elsevier, 2019, vol. 198, JUN, p. 224-229. ISSN 0039-9140. Available from: https://dx.doi.org/10.1016/j.talanta.2019.01.089.
      More: https://is.muni.cz/publication/1636956/en
    12. Monitoring DNA-Ligand Interactions in Living Human Cells Using NMR Spectroscopy
      KRAFČÍKOVÁ, Michaela, Šimon DŽATKO, C. CARON, A. GRANZHAN, Radovan FIALA, Tomáš LOJA, M.P. TEULADE-FICHOU, T. FESSL, R. HANSEL-HERTSCH, J.L. MERGNY, S. FOLDYNOVA-TRANTIRKOVA and Lukáš TRANTÍREK. Monitoring DNA-Ligand Interactions in Living Human Cells Using NMR Spectroscopy. Journal of the American Chemical Society. Washington: American Chemical Society, 2019, vol. 141, No 34, p. 13281-13285. ISSN 0002-7863. Available from: https://dx.doi.org/10.1021/jacs.9b03031.
      More: https://is.muni.cz/publication/1576499/en
    13. Multicolor Immunophenotyping of Candidate Leukemic Stem Cell Markers in CD34+CD38- Chronic Myeloid Leukemia Stem Cells.
      ČULEN, Martin, Marianna ROMŽOVÁ, Dagmar SMITALOVÁ, Tomáš LOJA and Jiří MAYER. Multicolor Immunophenotyping of Candidate Leukemic Stem Cell Markers in CD34+CD38- Chronic Myeloid Leukemia Stem Cells. In 61st ASH Annual Meeting and Exposition, Orlando, Florida, USA. 2019.
      More: https://is.muni.cz/publication/1609522/en
    14. Nanoparticles as tags for protein tissue analysis using laser ablation inductively coupled plasma and mass spectrometry
      KUCHYNKA, Michaela, Michal MASAŘÍK, Marcela VLČNOVSKÁ, Viktor KANICKÝ and Tomáš VACULOVIČ. Nanoparticles as tags for protein tissue analysis using laser ablation inductively coupled plasma and mass spectrometry. 2019.
      More: https://is.muni.cz/publication/2226236/en
    15. Parallel G-triplexes and G-hairpins as potential transitory ensembles in the folding of parallel-stranded DNA G-Quadruplexes
      STADLBAUER, P., P. KUHROVA, Lukáš VICHEREK, P. BANAS, M. OTYEPKA, Lukáš TRANTÍREK and Jiří ŠPONER. Parallel G-triplexes and G-hairpins as potential transitory ensembles in the folding of parallel-stranded DNA G-Quadruplexes. Nucleic acids research. Oxford: Oxford University Press, 2019, vol. 47, No 14, p. 7276-7293. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz610.
      More: https://is.muni.cz/publication/1616857/en
    16. Selectively Oxidized Cellulose with Adjustable Molecular Weight for Controlled Release of Platinum Anticancer Drugs
      MUNSTER, Lukas, Michaela FOJTŮ, Zdenka CAPAKOVA, Tomáš VACULOVIČ, Michaela TVRDOŇOVÁ, Ivo KURITKA, Michal MASAŘÍK and Jan VICHA. Selectively Oxidized Cellulose with Adjustable Molecular Weight for Controlled Release of Platinum Anticancer Drugs. Biomacromolecules. Washington: American Chemical Society, 2019, vol. 20, No 4, p. 1623-1634. ISSN 1525-7797. Available from: https://dx.doi.org/10.1021/acs.biomac.8b01807.
      More: https://is.muni.cz/publication/1582276/en
    17. Systematic investigation of sequence requirements for DNA i-motif formation
      SKOLAKOVA, P., D. RENCIUK, J. PALACKY, Daniel KRAFČÍK, Z. DVORAKOVA, I. KEJNOVSKA, K. BEDNAROVA and M. VORLICKOVA. Systematic investigation of sequence requirements for DNA i-motif formation. Nucleic acids research. Oxford: Oxford University Press, 2019, vol. 47, No 5, p. 2177-2189. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkz046.
      More: https://is.muni.cz/publication/1635177/en

    2018

    1. Advances in the cellular structural biology of nucleic acids
      GIASSA, Ilektra-Chara, Jan RYNEŠ, T. FESSL, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. Advances in the cellular structural biology of nucleic acids. FEBS LETTERS. HOBOKEN: WILEY, 2018, vol. 592, No 12, p. 1997-2011. ISSN 1873-3468. Available from: https://dx.doi.org/10.1002/1873-3468.13054.
      More: https://is.muni.cz/publication/1503022/en
    2. Analysis of binding interfaces of the human scaffold protein AXIN1 by peptide microarrays
      HARNOŠ, Jakub, Jan RYNEŠ, Pavlína VÍŠKOVÁ, Silvie TRANTÍRKOVÁ, Lola Murielle BAJARD ÉP.ESNER, Lukáš TRANTÍREK and Vítězslav BRYJA. Analysis of binding interfaces of the human scaffold protein AXIN1 by peptide microarrays. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2018, vol. 293, No 42, p. 16337-16347. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.RA118.005127.
      More: https://is.muni.cz/publication/1495637/en
    3. Evaluation of the Stability of DNA i-Motifs in the Nuclei of Living Mammalian Cells
      DŽATKO, Šimon, Michaela KRAFČÍKOVÁ, R. HANSEL-HERTSCH, T. FESSL, Radovan FIALA, Tomáš LOJA, Daniel KRAFČÍK, J.L. MERGNY, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. Evaluation of the Stability of DNA i-Motifs in the Nuclei of Living Mammalian Cells. Angewandte Chemie International Edition. WEINHEIM (GERMANY): Verlag Chemie, 2018, vol. 57, No 8, p. 2165-2169. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.201712284.
      More: https://is.muni.cz/publication/1409989/en
    4. i-Motif of cytosine-rich human telomere DNA fragments containing natural base lesions
      DVOŘÁKOVÁ, Zuzana, Daniel RENČIUK, Iva KEJNOVSKÁ, Petra ŠKOLÁKOVÁ, Klára BEDNÁŘOVÁ, J SAGI and Michaela VORLÍČKOVÁ. i-Motif of cytosine-rich human telomere DNA fragments containing natural base lesions. Nucleic Acids Research. Oxford: Oxford University Press, 2018, vol. 46, No 4, p. 1624-1634. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gky035.
      More: https://is.muni.cz/publication/1413677/en
    5. Metabolic stress regulates ERK activity by controlling KSR-RAF heterodimerization
      VERLANDE, Amandine, Michaela KRAFČÍKOVÁ, David POTĚŠIL, Lukáš TRANTÍREK, Zbyněk ZDRÁHAL, M. ELKALAF, J. TRNKA, Karel SOUČEK, N. RAUCH, J. RAUCH, W. KOLCH and Stjepan ULDRIJAN. Metabolic stress regulates ERK activity by controlling KSR-RAF heterodimerization. EMBO reports. Hoboken: Wiley-Blackwell, 2018, vol. 19, No 2, p. 320-336. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.201744524.
      More: https://is.muni.cz/publication/1409120/en
    6. Multivalency regulates activity in an intrinsically disordered transcription factor
      CLARK, S., J.B. MYERS, A. KING, Radovan FIALA, Jiří NOVÁČEK, G. PEARCE, J. HEIERHORST, S.L. REICHOW and E.J. BARBAR. Multivalency regulates activity in an intrinsically disordered transcription factor. elife. CAMBRIDGE: ELIFE SCIENCES PUBLICATIONS LTD, 2018, vol. 7, MAY, p. 1-28. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.36258.
      More: https://is.muni.cz/publication/1507897/en
    7. Nanodiamonds as "artificial proteins": Regulation of a cell signalling system using low nanomolar solutions of inorganic nanocrystals
      BÁLEK, Lukáš, Marcela BUCHTOVÁ, Michaela BOSÁKOVÁ, Miroslav VAŘECHA, Silvie TRANTÍRKOVÁ, Iva GUDERNOVÁ, Iva VESELÁ, Jan HAVLIK, Jitka NEBURKOVA, Stuart TURNER, Mateusz Adam KRZYSCIK, Malgorzata ZAKRZEWSKA, Lars KLIMASCHEWSKI, Peter CLAUS, Lukáš TRANTÍREK, Petr CIGLER and Pavel KREJČÍ. Nanodiamonds as "artificial proteins": Regulation of a cell signalling system using low nanomolar solutions of inorganic nanocrystals. Biomaterials. OXFORD: ELSEVIER SCI LTD, 2018, vol. 176, SEP 2018, p. 106-121. ISSN 0142-9612. Available from: https://dx.doi.org/10.1016/j.biomaterials.2018.05.030.
      More: https://is.muni.cz/publication/1490507/en
    8. NMR spectroscopy of nucleic acids in human cells
      TRANTÍREK, Lukáš. NMR spectroscopy of nucleic acids in human cells. In 43rd FEBS Congress Prague. 2018. ISSN 2211-5463.
      More: https://is.muni.cz/publication/1503859/en
    9. Protonation of nucleobases in single- and double-stranded DNA
      GONZÁLEZ-OLVERA, Julio C., Matúš DUREC, Radek MAREK, Radovan FIALA, María del Rosario J. MORALES-GARCÍA, Eva GONZÁLEZ-JASSO and Reynaldo Carlos PLESS. Protonation of nucleobases in single- and double-stranded DNA. ChemBioChem. Weinheim: WILEY-VCH, 2018, vol. 19, No 19, p. 2088-2098. ISSN 1439-4227. Available from: https://dx.doi.org/10.1002/cbic.201800310.
      More: https://is.muni.cz/publication/1426160/en
    10. The inositol phosphatase SHIP2 enables sustained ERK activation downstream of FGF receptors by recruiting Src kinases
      FAFÍLEK, Bohumil, Lukáš BÁLEK, Michaela BOSÁKOVÁ, Miroslav VAŘECHA, Alexandru NITĂ, Tomáš GREGOR, Iva GUDERNOVÁ, Jitka KŘENOVÁ, S. GHOSH, Martin PISKÁČEK, Lucie JONATOVA, Nicole ČERNOHORSKÁ, J.T. ZIEBA, M. KOSTAS, E.M. HAUGSTEN, J. WESCHE, C. ERNEUX, Lukáš TRANTÍREK, D. KRAKOW and Pavel KREJČÍ. The inositol phosphatase SHIP2 enables sustained ERK activation downstream of FGF receptors by recruiting Src kinases. SCIENCE SIGNALING. WASHINGTON: AMER ASSOC ADVANCEMENT SCIENCE, 2018, vol. 11, No 548, p. 1-14. ISSN 1945-0877. Available from: https://dx.doi.org/10.1126/scisignal.aap8608.
      More: https://is.muni.cz/publication/1490481/en
    11. The PTH/PTHrP-SIK3 pathway affects skeletogenesis through altered mTOR signaling
      CSUKASI, F., I. DURAN, M. BARAD, Tomáš BÁRTA, Iva GUDERNOVÁ, Lukáš TRANTÍREK, J.H. MARTIN, C.Y. KUO, J. WOODS, H. LEE, D.H. COHN, Pavel KREJČÍ and D. KRAKOW. The PTH/PTHrP-SIK3 pathway affects skeletogenesis through altered mTOR signaling. Science Translational Medicine. Washington: American Association for the Advancement of Science, 2018, vol. 10, No 459, p. 1-11. ISSN 1946-6234. Available from: https://dx.doi.org/10.1126/scitranslmed.aat9356.
      More: https://is.muni.cz/publication/1490193/en

    2017

    1. Cellular structural biology of nucleic acids
      DŽATKO, Šimon, Michaela KRAFČÍKOVÁ, Radovan FIALA, Tomáš FESSL, Tomáš LOJA, C. CARON, A. GRANZHAN, M.P. TEULADE FICHOU, J.L. MERGNY, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. Cellular structural biology of nucleic acids. In 42nd FEBS Congress, Jerusalem, Izrael, září 2017 in The FEBS Journal (2017). 2017. ISSN 1742-464X.
      More: https://is.muni.cz/publication/1400696/en
    2. Clustered abasic lesions profoundly change the structure and stability of human telomeric G-quadruplexes
      KEJNOVSKÁ, Iva, Klára BEDNÁŘOVÁ, Daniel RENČIUK, Zuzana DVOŘÁKOVÁ, Petra ŠKOLÁKOVÁ, Lukáš TRANTÍREK, Radovan FIALA, Michaela VORLÍČKOVÁ and J. SAGI. Clustered abasic lesions profoundly change the structure and stability of human telomeric G-quadruplexes. Nucleic Acids Research. Oxford: Oxford University Press, 2017, vol. 45, No 8, p. 4294-4305. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkx191.
      More: https://is.muni.cz/publication/1392894/en
    3. Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells
      BOSTROM, Johan, Zuzana ŠRÁMKOVÁ, Alena SALAŠOVÁ, Helena Anna Dagmar JOHARD, Diana MAHDESSIAN, Radek FEDR, Carolyn MARKS, Jiřina MEDALOVÁ, Karel SOUČEK, Emma LUNDBERG, Sten LINNARSON, Vítězslav BRYJA, Petra SEKYROVÁ, Mikael ALTUN and Michael ANDÄNG. Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells. PLOS ONE. Public Library of Science, 2017, vol. 12, No 12, p. 0188772-188795. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0188772.
      More: https://is.muni.cz/publication/1405981/en
    4. G-quadruplex formation in the Oct4 promoter positively regulates Oct4 expression
      RENCIUK, D., Jan RYNEŠ, I. KEJNOVSKA, Silvie TRANTÍRKOVÁ, Michael ANDÄNG, Lukáš TRANTÍREK and M. VORLICKOVA. G-quadruplex formation in the Oct4 promoter positively regulates Oct4 expression. BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. AMSTERDAM: ELSEVIER SCIENCE BV, 2017, vol. 1860, No 2, p. 175-183. ISSN 1874-9399. Available from: https://dx.doi.org/10.1016/j.bbagrm.2016.11.002.
      More: https://is.muni.cz/publication/1409993/en
    5. Characterization of Non-B DNA structures in complex environment of mammalian cells by in cell NMR spectroscopy
      DŽATKO, Šimon, Michaela KRAFČÍKOVÁ, Radovan FIALA, Tomáš FESSL, Tomáš LOJA, JL. MERGNY, Silvie TRANTÍRKOVÁ and TRANTÍREK. Characterization of Non-B DNA structures in complex environment of mammalian cells by in cell NMR spectroscopy. In G4thering - 6th International Meeting on Quadruplex Nucleic Acids, Praha. 2017.
      More: https://is.muni.cz/publication/1400692/en
    6. Inhibitor repurposing reveals ALK, LTK, FGFR, RET and TRK kinases as the targets of AZD1480
      GUDERNOVÁ, Iva, Lukáš BÁLEK, Miroslav VAŘECHA, Jana FIALOVÁ KUČEROVÁ, Michaela BOSÁKOVÁ, Bohumil FAFÍLEK, Veronika PALUŠOVÁ, Stjepan ULDRIJAN, Lukáš TRANTÍREK and Pavel KREJČÍ. Inhibitor repurposing reveals ALK, LTK, FGFR, RET and TRK kinases as the targets of AZD1480. Oncotarget. New York: Impact Journals LLC, 2017, vol. 8, No 65, p. 109319-109331. ISSN 1949-2553. Available from: https://dx.doi.org/10.18632/oncotarget.22674.
      More: https://is.muni.cz/publication/1404487/en
    7. Membrane-Depolarizing Channel Blockers Induce Selective Glioma Cell Death by Impairing Nutrient Transport and Unfolded Protein/Amino Acid Responses
      NIKLASSON, M., G. MADDALO, Zuzana ŠRÁMKOVÁ, E. MUTLU, S. WEE, Petra SEKYROVÁ, L. SCHMIDT, N. FRITZ, I. DEHNISCH, G. KYRIATZIS, Michaela KRAFČÍKOVÁ, B.B. CARSON, J.M. FEENSTRA, V.D. MARINESCU, A. SEGERMAN, M. HARALDSSON, A.L. GUSTAVSSON, L.G.J. HAMMARSTROM, A.J. JENSEN, L. UHRBOM, A.F.M. ALTELAAR, S. LINNARSSON, P. UHLEN, Lukáš TRANTÍREK, C.T. VINCENT, S. NELANDER, P.O. ENGER and Michael ANDÄNG. Membrane-Depolarizing Channel Blockers Induce Selective Glioma Cell Death by Impairing Nutrient Transport and Unfolded Protein/Amino Acid Responses. Cancer Research. PHILADELPHIA: AMER ASSOC CANCER RESEARCH, 2017, vol. 77, No 7, p. 1741-1752. ISSN 0008-5472. Available from: https://dx.doi.org/10.1158/0008-5472.CAN-16-2274.
      More: https://is.muni.cz/publication/1406729/en
    8. Microenvironmental interactions between endothelial and lymphoma cells: a role for the canonical WNT pathway in Hodgkin lymphoma
      LINKE, F., M. HARENBERG, M.M. NIETERT, S. ZAUNIG, von Bonin F., A. ARLT, M. SZCZEPANOWSKI, HA WEICH, S. LUTZ, C. DULLIN, Pavlína JANOVSKÁ, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, Petra OVESNÁ, W. KLAPPER, T. BEISSBARTH, F. ALVES, Vítězslav BRYJA, L. TRÜMPER, J. WILTING and Dieter KUBE. Microenvironmental interactions between endothelial and lymphoma cells: a role for the canonical WNT pathway in Hodgkin lymphoma. Leukemia. London: Nature Publishing Group, 2017, vol. 31, No 2, p. 361-372. ISSN 0887-6924. Available from: https://dx.doi.org/10.1038/leu.2016.232.
      More: https://is.muni.cz/publication/1365014/en
    9. Monitoring DNA-ligand interactions using in cell NMR spectroscopy
      KRAFČÍKOVÁ, Michaela, Šimon DŽATKO, Tomáš LOJA, Radovan FIALA, A GRANZHAN, MP. TEULADE-FICHOU, C. CARON, Silvie TRANTÍRKOVÁ and TRANTÍREK. Monitoring DNA-ligand interactions using in cell NMR spectroscopy. In G4thering - 6th International Meeting on Quadruplex Nucleic Acids, Praha. 2017.
      More: https://is.muni.cz/publication/1400695/en
    10. NMR STUDY OF d(CCCGAGA) i-MOTIF STRUCTURE
      NOVOTNÝ, Aleš, Jan NOVOTNÝ, Radovan FIALA and Radek MAREK. NMR STUDY OF d(CCCGAGA) i-MOTIF STRUCTURE. In 32nd NMR VALTICE. 2017. ISBN 978-80-86441-49-8.
      More: https://is.muni.cz/publication/1643456/en
    11. One reporter for in-cell activity profiling of majority of protein kinase oncogenes
      GUDERNOVÁ, Iva, Silvie TRANTÍRKOVÁ, Barbora EL GHANNAMOVÁ, Bohumil FAFÍLEK, Miroslav VAŘECHA, Lukáš BÁLEK, Eva HRUBÁ, Lucie JONÁTOVÁ, Iva JELÍNKOVÁ, Michaela BOSÁKOVÁ, Lukáš TRANTÍREK, Jiří MAYER and Pavel KREJČÍ. One reporter for in-cell activity profiling of majority of protein kinase oncogenes. eLife. Cambridge: eLife Sciences Publications Ltd., 2017, vol. 6, "e21536", p. 1-14. ISSN 2050-084X. Available from: https://dx.doi.org/10.7554/eLife.21536.
      More: https://is.muni.cz/publication/1380705/en
    12. Structure of a Stable G-Hairpin
      GAJARSKÝ, Martin, Martina Lenarcic ZIVKOVIC, Petr STADLBAUER, Bruno PAGANO, Radovan FIALA, Jussara AMATO, L´ubomir TOMASKA, Jiří ŠPONER, Janez PLAVEC and Lukáš TRANTÍREK. Structure of a Stable G-Hairpin. Journal of the American Chemical Society. WASHINGTON: American Chemical Society, 2017, vol. 139, No 10, p. 3591-3594. ISSN 0002-7863. Available from: https://dx.doi.org/10.1021/jacs.6b10786.
      More: https://is.muni.cz/publication/1383183/en
    13. Structure-activity relationships in polymorphic G-quadruplex forming segment of c-MYC promoter
      RYNEŠ, Jan, T. FESSL, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. Structure-activity relationships in polymorphic G-quadruplex forming segment of c-MYC promoter. In 42nd Congress of the Federation-of-European-Biochemical-Societies (FEBS) on From Molecules to Cells and Back. 2017. ISSN 1742-464X.
      More: https://is.muni.cz/publication/1411820/en
    14. Systematic analysis of BCR-ABL interactome in chronic myeloid leukemia
      GREGOR, Tomáš, Jan RYNEŠ, Silvie TRANTÍRKOVÁ, Jiří MAYER, Pavel KREJČÍ and Lukáš TRANTÍREK. Systematic analysis of BCR-ABL interactome in chronic myeloid leukemia. In 42nd Congress of the Federation-of-European-Biochemical-Societies (FEBS) on From Molecules to Cells and Back. 2017. ISSN 1742-464X.
      More: https://is.muni.cz/publication/1411821/en

    2016

    1. An inactivating mutation in intestinal cell kinase, ICK, impairs hedgehog signalling and causes short rib-polydactyly syndrome
      TAYLOR, S. Paige, Michaela BOSÁKOVÁ, Miroslav VAŘECHA, Lukáš BÁLEK, Tomáš BÁRTA, Lukáš TRANTÍREK, Iva JELÍNKOVÁ, Ivan DURAN, Iva VESELÁ, Kimberly N. FORLENZA, Jorge H. MARTIN, Aleš HAMPL, Michael BAMSHAD, Deborah NICKERSON, Margie L. JAWORSKI, Jieun SONG, Hyuk WAN KO, Daniel H. COHN, Deborah KRAKOW and Pavel KREJČÍ. An inactivating mutation in intestinal cell kinase, ICK, impairs hedgehog signalling and causes short rib-polydactyly syndrome. Human Molecular Genetics. Oxford: Oxford University Press, 2016, vol. 25, No 18, p. 3998-4011. ISSN 0964-6906. Available from: https://dx.doi.org/10.1093/hmg/ddw240.
      More: https://is.muni.cz/publication/1362765/en
    2. Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin–spin interactions
      VAVRINSKÁ, Andrea, Jiří ZELINKA, Jakub ŠEBERA, Vladimír SYCHROVSKÝ, Radovan FIALA, Rolf BOELENS, Vladimír SKLENÁŘ and Lukáš TRANTÍREK. Impact of nucleic acid self-alignment in a strong magnetic field on the interpretation of indirect spin–spin interactions. Journal of biomolecular NMR. Dordrecht: Springer, 2016, vol. 64, No 1, p. 53-62. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-015-0005-x.
      More: https://is.muni.cz/publication/1324105/en
    3. Impaired mitophagy in Fanconi anemia is dependent on mitochondrial fission
      SHYAMSUNDER, Pavithra, Milan EŠNER, Maunish BARVALIA, Yu Jun WU, Tomáš LOJA, Huat Bay BOON, Matilde E. LLEONART, Rama S VERMA, Lumír KREJČÍ and Alex LYAKHOVICH. Impaired mitophagy in Fanconi anemia is dependent on mitochondrial fission. Oncotarget. New York: Impact Journals, 2016, vol. 7, No 36, p. 58065-58074. ISSN 1949-2553. Available from: https://dx.doi.org/10.18632/oncotarget.11161.
      More: https://is.muni.cz/publication/1357230/en
    4. KSR proteins link metabolic changes to the MAPK/ERK pathway
      VERLANDE, Amandine, David POTĚŠIL, Zbyněk ZDRÁHAL, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, Karel SOUČEK, Jan TRNKA, W KOLCH and M ELKALAF. KSR proteins link metabolic changes to the MAPK/ERK pathway. In EACR 24: from basic research to precision medicine, Central Convention Complex, Manchester, UK, July 9-12, 2016, poster presentation. 2016.
      More: https://is.muni.cz/publication/1399930/en
    5. Notch stimulates growth by direct regulation of genes involved in the control of glycolysis and the tricarboxylic acid cycle
      SLANINOVA, Vera, Michaela KRAFČÍKOVÁ, Raquel PEREZ-GOMEZ, Pavel STEFFAL, Lukáš TRANTÍREK, Sarah J. BRAY and Alena KREJCI. Notch stimulates growth by direct regulation of genes involved in the control of glycolysis and the tricarboxylic acid cycle. OPEN BIOLOGY. LONDON: ROYAL SOC, 2016, vol. 6, No 2, p. nestránkováno, 14 pp. ISSN 2046-2441. Available from: https://dx.doi.org/10.1098/rsob.150155.
      More: https://is.muni.cz/publication/1375509/en
    6. Redox Processes of Guanine Moieties in DNA Heptamers Related to Hydrogen Evolution
      TŘÍSKOVÁ, Iveta, Radovan FIALA and Libuše TRNKOVÁ. Redox Processes of Guanine Moieties in DNA Heptamers Related to Hydrogen Evolution. Electroanalysis. 2016, vol. 28, No 11, p. 2841-2848. ISSN 1040-0397. Available from: https://dx.doi.org/10.1002/elan.201600321.
      More: https://is.muni.cz/publication/1373345/en
    7. Spectral density mapping at multiple magnetic fields suitable for C-13 NMR relaxation studies
      KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Radovan FIALA, Pavel SRB, Petr PADRTA, Jana PAVLÍKOVÁ PŘECECHTĚLOVÁ, Mária ŠOLTÉSOVÁ, Jozef KOWALEWSKI, Göran WIDMALM, Josef CHMELÍK, Vladimír SKLENÁŘ and Lukáš ŽÍDEK. Spectral density mapping at multiple magnetic fields suitable for C-13 NMR relaxation studies. Journal of Magnetic Resonance. San Diego: Academic Press Inc. Elsevier Science, 2016, vol. 266, May, p. 23-40. ISSN 1090-7807. Available from: https://dx.doi.org/10.1016/j.jmr.2016.02.016.
      More: https://is.muni.cz/publication/1350870/en
    8. ZD7288, a blocker of the HCN channel family, increases doubling time of mouse embryonic stem cells and modulates differentiation outcomes in a context-dependent manner
      OMELYANENKO, Anna, Petra SEKYROVÁ and Michael ANDÄNG. ZD7288, a blocker of the HCN channel family, increases doubling time of mouse embryonic stem cells and modulates differentiation outcomes in a context-dependent manner. SpringerPlus. Cham: Springer International Publishing, 2016, vol. 5, January, p. nestránkováno, 10 pp. ISSN 2193-1801. Available from: https://dx.doi.org/10.1186/s40064-016-1678-7.
      More: https://is.muni.cz/publication/1375514/en

    2015

    1. A novel variant of FGFR3 causes proportionate short stature
      KANT, Sarina G., Iveta ČERVENKOVÁ, Lukáš BÁLEK, Lukáš TRANTÍREK, Gijs W. E. SANTEN, Martine C. de VRIES, Hermine A. van DUYVENVOORDE, Michiel J. R. van der WIELEN, Annemieke J. M. H. VERKERK, André G. UITTERLINDEN, Sabine E. HANNEMA, Jan M. WIT, Wilma OOSTDIJK, Pavel KREJČÍ and Monique LOSEKOOT. A novel variant of FGFR3 causes proportionate short stature. European Journal od Endocrinology. Bristol: Bioscientifica LTD, 2015, vol. 172, No 6, p. 763-770. ISSN 0804-4643. Available from: https://dx.doi.org/10.1530/EJE-14-0945.
      More: https://is.muni.cz/publication/1306875/en
    2. Diverse effects of naturally occurring base lesions on the structure and stability of the human telomere DNA quadruplex
      KAŠPAROVÁ, Helena, Zuzana DVOŘÁKOVÁ, Daniel RENČIUK, Klára BEDNÁŘOVÁ, Iva KEJNOVSKÁ, Lukáš TRANTÍREK, Michaela VORLÍČKOVÁ and Janos SAGI. Diverse effects of naturally occurring base lesions on the structure and stability of the human telomere DNA quadruplex. Biochimie. Paris: Elsevier France- editions Scientifiques Medicales Elsevier, 2015, vol. 118, Nov, p. 15-25. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2015.07.013.
      More: https://is.muni.cz/publication/1321779/en
    3. Expression and Subcellular Distribution of GFP-Tagged Human Tetraspanin Proteins in Saccharomyces cerevisiae
      SKAAR, Karin, Henryj J. KORZA, Michael TARRY, Petra SEKYROVÁ and Martin HOGBOM. Expression and Subcellular Distribution of GFP-Tagged Human Tetraspanin Proteins in Saccharomyces cerevisiae. Plos one. San Francisco: Public Library of Science, 2015, vol. 10, No 7, p. nestránkováno, 19 pp. ISSN 1932-6203. Available from: https://dx.doi.org/10.1371/journal.pone.0134041.
      More: https://is.muni.cz/publication/1342269/en
    4. Hairpins participating in folding of human telomeric sequence quadruplexes studied by standard and T-REMD simulations
      STADLBAUER, Petr, Petra KUHROVÁ, Pavel BANÁŠ, Jaroslav KOČA, Giovanni BUSSI, Lukáš TRANTÍREK, Michal OTYEPKA and Jiří ŠPONER. Hairpins participating in folding of human telomeric sequence quadruplexes studied by standard and T-REMD simulations. Nucleic Acids Research. Oxford: Oxford University Press, 2015, vol. 43, No 20, p. 9626-9644. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv994.
      More: https://is.muni.cz/publication/1335876/en
    5. Instability restricts signaling of multiple fibroblast growth factors
      BUCHTOVÁ, marcela, Radka CHALOUPKOVÁ, Malgorzata ZAKRZEWSKA, Iva VESELÁ, Petra CELÁ, Jana BARÁTHOVÁ, Iva GUDERNOVÁ, Renata ZAJICKOVA, Lukáš TRANTÍREK, Jorge MARTIN, Martin KOSTAS, Jacek OTLEWSKI, Jiří DAMBORSKÝ, Alois KOZUBÍK, Antoni WIEDLOCHA and Pavel KREJČÍ. Instability restricts signaling of multiple fibroblast growth factors. Cellular and Molecular Life Sciences. Basel: Springer, 2015, vol. 72, No 12, p. 2445-2459. ISSN 1420-682X. Available from: https://dx.doi.org/10.1007/s00018-015-1856-8.
      More: https://is.muni.cz/publication/1306872/en
    6. Lithium increases proliferation of hippocampal neural stem/progenitor cells and rescues irradiation-induced cell cycle arrest in vitro
      ZANNI, Giulia, Elena DI MARTINO, Anna OMELYANENKO, Michael ANDÄNG, Ulla DELLE, Kecke ELMROTH and Klas BLOMGREN. Lithium increases proliferation of hippocampal neural stem/progenitor cells and rescues irradiation-induced cell cycle arrest in vitro. Oncotarget. Albany: Impact Journals, 2015, vol. 6, No 35, p. 37083-37097. ISSN 1949-2553.
      More: https://is.muni.cz/publication/1342213/en
    7. Unique C. elegans telomeric overhang structures reveal the evolutionarily conserved properties of telomeric DNA
      ŠKOLÁKOVÁ, Petra, Silvie TRANTÍRKOVÁ, Klára BEDNÁŘOVÁ, Radovan FIALA, Michaela VORLÍČKOVÁ and Lukáš TRANTÍREK. Unique C. elegans telomeric overhang structures reveal the evolutionarily conserved properties of telomeric DNA. Nucleic Acids Research. Oxford, UK: Oxford Press, 2015, vol. 43, No 9, p. 4733-4745. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkv296.
      More: https://is.muni.cz/publication/1305254/en

    2014

    1. FGF19/BETA-KLOTHO REGULATE PHYSIOLOGY AND DIFFERENTIATION OF HUMAN PLURIPOTENT STEM CELLS
      BOSÁKOVÁ, Michaela, Pavel KREJČÍ, Lukáš TRANTÍREK and Petr DVOŘÁK. FGF19/BETA-KLOTHO REGULATE PHYSIOLOGY AND DIFFERENTIATION OF HUMAN PLURIPOTENT STEM CELLS. In ISSCR 12th Annual Meeting, Vancouver, Canada, June 18-21 2014. 2014.
      More: https://is.muni.cz/publication/1339565/en
    2. Functional Analysis of Dishevelled-3 Phosphorylation Identifies Distinct Mechanisms Driven by Casein Kinase 1 epsilon and Frizzled5
      BERNATÍK, Ondřej, Kateřina ŠEDOVÁ, Carolin SCHILLE, Sri Ranjani GANJI, Igor ČERVENKA, Lukáš TRANTÍREK, Alexandra SCHAMBONY, Zbyněk ZDRÁHAL and Vítězslav BRYJA. Functional Analysis of Dishevelled-3 Phosphorylation Identifies Distinct Mechanisms Driven by Casein Kinase 1 epsilon and Frizzled5. Journal of Biological Chemistry. Bethesda, USA: Amer. Soc. Biochem. Mol. Biol., 2014, vol. 289, No 34, p. 23520-23533. ISSN 0021-9258. Available from: https://dx.doi.org/10.1074/jbc.M114.590638.
      More: https://is.muni.cz/publication/1209992/en
    3. In-Cell NMR and EPR Spectroscopy of Biomacromolecules
      HANSEL, Robert, Laura M. LUH, Ivan CORBERSKI, Lukáš TRANTÍREK and Volker DOTSCH. In-Cell NMR and EPR Spectroscopy of Biomacromolecules. Angewandte Chemie International Edition. Weinheim, Germany: Wiley-VCH Verlag GmbH & Co., 2014, vol. 53, No 39, p. 10300-10314. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.201311320.
      More: https://is.muni.cz/publication/1209991/en
    4. Loss of loop adenines alters human telomere d(AG3(TTAG3)3) quadruplex folding
      BABINSKÝ, Martin, Radovan FIALA, Iva KEJNOVSKÁ, Klára BEDNÁŘOVÁ, Radek MAREK, Janos SAGI, Vladimír SKLENÁŘ and Michaela VORLÍČKOVÁ. Loss of loop adenines alters human telomere d(AG3(TTAG3)3) quadruplex folding. Nucleic Acids Research. UK: Oxford University Press, 2014, vol. 42, No 22, p. 14031-14041. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gku1245.
      More: https://is.muni.cz/publication/1215331/en
    5. MECHANISM OF BASE EXCISION WITH THE hOGG1 DNA REPAIR ENZYME
      ŠEBERA, Jakub, Lukáš TRANTÍREK, Jiří FUKAL, Yoshiyuki TANAKA and Vladimír SYCHROVSKÝ. MECHANISM OF BASE EXCISION WITH THE hOGG1 DNA REPAIR ENZYME. Chemické listy. Praha: Česká společnost chemická, 2014, vol. 108, No 4, p. 364-367. ISSN 0009-2770.
      More: https://is.muni.cz/publication/1209994/en
    6. Modulation of melanoma metabolism and viability with hexokinase and mitochondrial complex I inhibitors
      VERLANDE, Amandine, Michaela KRAFČÍKOVÁ, Lukáš TRANTÍREK, I JELÍNKOVÁ, Alena HYRŠLOVÁ VACULOVÁ and Stjepan ULDRIJAN. Modulation of melanoma metabolism and viability with hexokinase and mitochondrial complex I inhibitors. In EMBO conference: Cellular signaling and cancer therapy, Hotel Croatia, Cavtat, Croatia, May 23-27, 2014, poster presentation. 2014.
      More: https://is.muni.cz/publication/1399931/en
    7. The activation of N-glycosidic bond cleavage performed by base-excision repair enzyme hOGG1; theoretical study of the role of Lys 249 residue in activation of G, OxoG and FapyG
      ŠEBERA, Jakub, Lukáš TRANTÍREK, Y. TANAKA, R. NENCKA, J. FUKAL and V. SYCHROVSKÝ. The activation of N-glycosidic bond cleavage performed by base-excision repair enzyme hOGG1; theoretical study of the role of Lys 249 residue in activation of G, OxoG and FapyG. RSC Advances. Cambridge: Royal Society of Chemistry, 2014, vol. 4, No 83, p. 44043-44051. ISSN 2046-2069. Available from: https://dx.doi.org/10.1039/c4ra08278h.
      More: https://is.muni.cz/publication/1231762/en
    8. Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations
      STADLBAUER, Petr, Lukáš TRANTÍREK, Thomas E. CHEATHAM III., Jaroslav KOČA and Jiří ŠPONER. Triplex intermediates in folding of human telomeric quadruplexes probed by microsecond-scale molecular dynamics simulations. Biochimie. Paris: ELSEVIER FRANCE-EDITIONS SCIENTIFIQUES MEDICALES ELSEVIER, 2014, 105c, October, p. 22-35. ISSN 0300-9084. Available from: https://dx.doi.org/10.1016/j.biochi.2014.07.009.
      More: https://is.muni.cz/publication/1205389/en

    2013

    1. Ceremonial inauguration of the "Josef Dadok National NMR Centre"
      SKLENÁŘ, Vladimír and Radovan FIALA. Ceremonial inauguration of the "Josef Dadok National NMR Centre". 2013.
      More: https://is.muni.cz/publication/1341646/en
    2. Expression of FGF19 in Human Embryonic Stem Cells
      KREJČÍ, Pavel, Michaela KUNOVÁ, Iva KUBÍKOVÁ, Lukáš TRANTÍREK, Alois KOZUBÍK and Petr DVOŘÁK. Expression of FGF19 in Human Embryonic Stem Cells. STEM CELLS. HOBOKEN: WILEY-BLACKWELL, 2013, vol. 31, No 11, p. 2582-2584. ISSN 1066-5099. Available from: https://dx.doi.org/10.1002/stem.1493.
      More: https://is.muni.cz/publication/1126953/en
    3. High-Resolution Insight into G-Overhang Architecture
      HAENSEL, Robert, Frank LOEHR, Lukáš TRANTÍREK and Volker DOETSCH. High-Resolution Insight into G-Overhang Architecture. Journal of the American Chemical Society. Washington: American Chemical Society, 2013, vol. 135, No 7, p. 2816-2824. ISSN 0002-7863. Available from: https://dx.doi.org/10.1021/ja312403b.
      More: https://is.muni.cz/publication/1169515/en
    4. Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic N-15 chemical shielding anisotropy tensors
      EMMER, Jiří, Andrea VAVRINSKÁ, Vladimír SYCHROVSKÝ, Ladislav BENDA, Zdeněk KŘÍŽ, Jaroslav KOČA, Rolf BOELENS, Vladimír SKLENÁŘ and Lukáš TRANTÍREK. Influence of the O-phosphorylation of serine, threonine and tyrosine in proteins on the amidic N-15 chemical shielding anisotropy tensors. Journal of biomolecular NMR. Dordrecht: Springer, 2013, vol. 55, No 1, p. 59-70. ISSN 0925-2738. Available from: https://dx.doi.org/10.1007/s10858-012-9686-6.
      More: https://is.muni.cz/publication/1110023/en

    2012

    1. Accurate Reduced Spectral Density Mapping for Analysis of 13C Relaxation Rates
      KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Radovan FIALA, Vladimír SKLENÁŘ and Lukáš ŽÍDEK. Accurate Reduced Spectral Density Mapping for Analysis of 13C Relaxation Rates. In 53rd Experimental Nuclear Magnetic Resonance Conference. 2012.
      More: https://is.muni.cz/publication/1069054/en
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