Publication Records

HASSAN, Ahmed Adel Ibrahim Hassona, Matyáš PINKAS, Kosuke ITO, Toshio UCHIUMI and Gabriel DEMO. A novel archaeal ribosome anti-association factor promoting a distinctive 30S-30S dimerization. In RNA society meeting 2024. 2024.

FORINOVÁ, Michala, Alina PILIPENCO, N. Scott LYNN, Radka OBOŘILOVÁ, Hana ŠIMEČKOVÁ, Markéta VRABCOVÁ, Monika SPASOVOVÁ, Rachael JACK, Petr HORÁK, Milan HOUSKA, Petr SKLÁDAL, Petr ŠEDIVÁK, Zdeněk FARKA and Hana VAISOCHEROVÁ-LÍSALOVÁ. A reusable QCM biosensor with stable antifouling nano-coating for on-site reagent-free rapid detection of E. coli O157:H7 in food products. Food Control. Elsevier, 2024, vol. 165, November 2024, p. 1-10. ISSN 0956-7135. Available from: https://dx.doi.org/10.1016/j.foodcont.2024.110695.

LUO, Yu, Martina LENARČIČ ŽIVKOVIC, Jiawei WANG, Jan RYNEŠ, Silvie TRANTÍRKOVÁ, Lukáš TRANTÍREK, Daniela VERGA and Jean-Louis MERGNY. A sodium/potassium switch for G4-prone G/C-rich sequences. Nucleic acids research. Oxford: Oxford University Press, 2024, vol. 52, No 1, p. 448-461. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1073.

VRANA, Šimon, Kanako SUZUKI, Michaela VOJNÍKOVÁ, Daniela Katja BRENNER and Jan PŘIBYL. Advanced Imaging and Mechanical Profiling of Biological Samples with Confocal and Atomic Force Microscopy. In NanoBio and Med 2024, Barcelona. 2024.

OBOŘILOVÁ, Radka, Jakub HRUŠKA, Rahul DEB, Robert VÁCHA and Jan PŘIBYL. AFM Spectroscopy for the Study of Lipid Bilayer Stability and Morphology. In NanoBio and Med 2024, Barcelona. 2024.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jakub ČILLÍK, Lucie NOVOTNÁ and Adrián ROŠINEC. AlphaFind. 2024. Available from: https://dx.doi.org/10.5281/zenodo.11085862.

SLANINÁKOVÁ, Terézia, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Jakub ČILLÍK, Miriama JÁNOŠOVÁ, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In Elixir All-Hands 2024. 2024. Available from: https://dx.doi.org/10.7490/f1000research.1119872.1.

GREŠOVÁ, Katarína, Pavlína ŠPRINGEROVÁ, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Jaroslav OĽHA, Adrián ROŠINEC, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind — discover structure similarity across the proteome in AlphaFold DB. In ECCB2024. 2024.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome. bioRxiv, 2024.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Katarína GREŠOVÁ, Jaroslav OĽHA, Vlastislav DOHNAL, Adrián ROŠINEC and Matej ANTOL. AlphaFind: Discover structure similarity across the entire known proteome – data and model. 2024. Available from: https://dx.doi.org/10.48700/datst.d35zf-1ja47.

PROCHÁZKA, David, Terézia SLANINÁKOVÁ, Jaroslav OĽHA, Adrián ROŠINEC, Katarína GREŠOVÁ, Miriama JÁNOŠOVÁ, Jakub ČILLÍK, Jana PORUBSKÁ, Radka SVOBODOVÁ, Vlastislav DOHNAL and Matej ANTOL. AlphaFind: discover structure similarity across the proteome in AlphaFold DB. Nucleic acids research. Oxford: Oxford University Press, 2024, vol. 52, July 5, p. W182-W186, 5 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae397.

PAJTINKA, Peter and Robert VÁCHA. Amphipathic Helices Can Sense Both Positive and Negative Curvatures of Lipid Membranes. Journal of physical chemistry letters. Washington DC: AMER CHEMICAL SOC1155 16TH ST, NW, WASHINGTON, DC 20036, 2024, vol. 15, No 1, p. 175-179. ISSN 1948-7185. Available from: https://dx.doi.org/10.1021/acs.jpclett.3c02785.

JANKOVSKÁ, Dagmar, Nikol JURČOVÁ, Renata KUBÍNOVÁ, Jiří VÁCLAVÍK, Emil ŠVAJDLENKA, Anna MASCELLANI, Petr MARSIK, Kateřina BOUZKOVÁ and Milan MALANÍK. Anticholinesterase Activity of Methanolic Extract of Amorpha fruticosa Flowers and Isolation of Rotenoids and Putrescine and Spermidine Derivatives. PLANTS-BASEL. BASEL: MDPI, 2024, vol. 13, No 9, p. Neuvedeno, 10 pp. ISSN 2223-7747. Available from: https://dx.doi.org/10.3390/plants13091181.

YURENKO, Yevgen, Jan NOVOTNÝ, Radek MAREK and Jiří KOZELKA. Catalytic Mechanism of Formate Dehydrogenase: Does Rotation of Formate Provide the Impetus for Surmounting the Activation Energy Barrier? ChemistrySelect. Wiley-VCH, 2024, vol. 9, No 39, p. e202402979, 11 pp. ISSN 2365-6549. Available from: https://dx.doi.org/10.1002/slct.202402979.

HOŠKOVÁ, Kateřina, Šárka FAJTLOVÁ, Pavel PLEVKA, Michal MIKL, Milan EŠNER, Radka SVOBODOVÁ and Boris TICHÝ. CF Day 2023. 2024.

FARKA, Zdeněk, Karolína VYTISKOVÁ, Ekaterina MAKHNEVA, Eva ZIKMUNDOVÁ, Daniel HOLUB, Jakub BUDAY, David PROCHAZKA, Karel NOVOTNÝ, Petr SKLÁDAL, Pavel POŘÍZKA and Jozef KAISER. Comparison of single and double pulse laser-induced breakdown spectroscopy for the detection of biomolecules tagged with photon-upconversion nanoparticles. Analytica Chimica Acta. Elsevier, 2024, vol. 1299, April 2024, p. 1-8. ISSN 0003-2670. Available from: https://dx.doi.org/10.1016/j.aca.2024.342418.

DEB, Rahul, Marcelo D T TORRES, Miroslav BOUDNÝ, Marketa KOBERSKA, Floriana CAPPIELLO, Miroslav POPPER, Katerina DVORAKOVA BENDOVA, Martina DRABINOVÁ, Adelheid HANACKOVA, Katy JEANNOT, Milos PETRIK, Maria Luisa MANGONI, Gabriela BALIKOVA NOVOTNA, Marek MRÁZ, Cesar DE LA FUENTE-NUNEZ and Robert VÁCHA. Computational Design of Pore-Forming Peptides with Potent Antimicrobial and Anticancer Activities. Journal of Medicinal Chemistry. Washington: American Chemical Society, 2024, vol. 67, No 16, p. 14040-14061. ISSN 0022-2623. Available from: https://dx.doi.org/10.1021/acs.jmedchem.4c00912.

CARREIRA, Raquel, Tomas LAMA-DIAZ, Maria CRUGEIRAS, F Javier AGUADO, Marek ŠEBESTA, Lumír KREJČÍ and Miguel G BLANCO. Concurrent D-loop cleavage by Mus81 and Yen1 yields half-crossover precursors. Nucleic Acids Research. OXFORD: OXFORD UNIV PRESS, 2024. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae453.

ŠIMEČKOVÁ, Hana, Pavel PAYNE, Zdeněk FARKA, Roman PANTŮČEK, Pavel PLEVKA and Ivana MAŠLAŇOVÁ. CRISPR-Cas10 Engineering of Staphylococcus aureus bacteriophages for biosensing applications. In Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora 2024. 2024. ISSN 2336-7210.

SVOBODA, Tomáš, Jakub ČILLÍK, Michal MIKL, Tomáš SLAVÍČEK and Radka SVOBODOVÁ. Data Management and FAIRification in MAFIL. In Czech‐BioImaging Annual Scientific Conference 2024: Imaging Principles of Life. 2024.

SVOBODA, Tomáš, Adrián ROŠINEC, Tomáš RAČEK and Radka SVOBODOVÁ. Data Management of Biological Imaging Data. In ELIXIR CZ Annual Conference 2024: Data management. 2024.

SVOBODA, Tomáš and Adrián ROŠINEC. Data workflows at CEITEC MU. In Setkání OS metodiků MU. 2024.

PŘIBYL, Jan, Radka OBOŘILOVÁ, Jakub HRUŠKA, Lucie VÁLKOVÁ, Jan KOLÁČEK, Ondřej POKORA, Jan SLOVÁK and Monika PÁVKOVÁ GOLDBERGOVÁ. Destructive nanoindentation techniques to study biological membranes. Online. In Proceedings 15th International Conference on Nanomaterials - Research & Application. Ostrava: TANGER Ltd., 2024, p. 347-352. ISBN 978-80-88365-15-0. Available from: https://dx.doi.org/10.37904/nanocon.2023.4764.

KITOKA, Kristine, Alons LENDS, Gytis KUČINSKAS, Anna Lina BULA, Lukas KRASAUSKAS, Vytautas SMIRNOVAS, Monika ZILKOVA, Branislav KOVACECH, Rostislav SKRABANA, Jozef HRITZ and Kristaps JAUDZEMS. dGAE(297-391) Tau Fragment Promotes Formation of Chronic Traumatic Encephalopathy-Like Tau Filaments. Angewandte Chemie International Edition. WEINHEIM (GERMANY): Verlag Chemie, 2024, 8 pp. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202407821.

HASSAN, Ahmed Adel Ibrahim Hassona, Matyáš PINKAS, Kosuke ITO, Toshio UCHIUMI and Gabriel DEMO. Distinct 30S subunit dimerization architecture facilitated by a novel ribosome dimerization factor in archaea. In XX Discussions in Structural Molecular Biology. 2024. ISSN 1805-4382.

SLANINÁKOVÁ, Terézia, Katarína GREŠOVÁ, David PROCHÁZKA, Viktória SPIŠAKOVÁ, Adrián ROŠINEC, Jakub ČILLÍK, Pavlína ŠPRINGEROVÁ, Aleš KŘENEK, Vlastislav DOHNAL, Radka SVOBODOVÁ and Matej ANTOL. Fast, structure-based searching in a large-scale protein data repository. In ELIXIR CZ Annual Conference. 2024. Available from: https://dx.doi.org/10.13140/RG.2.2.31355.53281.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. GraSR: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.br8aq-db495.

SVOBODA, Tomáš, Adrián ROŠINEC and Ondřej FILIP. Hands-on experience with big data transfer via iRODS and Onedata. In e-INFRA CZ CONFERENCE 2024. 2024.

CRHA, Radek, Aneta KOZELEKOVÁ, Alena HOFROVÁ, Lucia IĽKOVIČOVÁ, Norbert GAŠPARIK, Pavel KADEŘÁVEK and Jozef HRITZ. Hiding in plain sight: Complex interaction patterns between Tau and 14-3-3zeta protein variants. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES. NETHERLANDS: ELSEVIER, 2024, vol. 266, Pt 2, p. 1-14. ISSN 0141-8130. Available from: https://dx.doi.org/10.1016/j.ijbiomac.2024.130802.

KOZELEKOVÁ, Aneta, Lucia IĽKOVIČOVÁ, Radek CRHA, Alena HOFROVÁ and Jozef HRITZ. How does phosphorylation affect interaction between 14-3-3ζ and Tau proteins? In XX Discussions in Structural Molecular Biology and 7th User Meeting of CIISB. 2024. ISSN 1211-5894.

MATĚJKOVÁ, Nikola, Lucie KORECKÁ, Petr ŠÁLEK, Olga KOČKOVÁ, Ewa PAVLOVA, Jitka KAŠPAROVÁ, Radka OBOŘILOVÁ, Zdeněk FARKA, Karel FROLICH, Martin ADAM, Anna CARRILLO, Zuzana ŠINKOROVÁ and Zuzana BÍLKOVÁ. Hyaluronic Acid Nanoparticles with Parameters Required for In Vivo Applications: From Synthesis to Parametrization. Biomacromolecules. Washington, DC: American Chemical Society, 2024, vol. 25, No 8, p. 4934-4945. ISSN 1525-7797. Available from: https://dx.doi.org/10.1021/acs.biomac.4c00370.

KLIMOVIČ, Šimon, Deborah BECKEROVÁ, Jakub VĚŽNÍK, Daniil KABANOV, Karel LACINA, Šárka JELÍNKOVÁ, Jaromír GUMULEC, Vladimír ROTREKL and Jan PŘIBYL. Hyaluronic acid-based hydrogels with tunable mechanics improved structural and contractile properties of cells. Biomaterials Advances. Elsevier B.V., 2024, vol. 159, May 2024, p. 213819-213830. ISSN 2772-9508. Available from: https://dx.doi.org/10.1016/j.bioadv.2024.213819.

FARKOVÁ, Veronika, Ludmila KŘÍŽOVÁ, Kateřina DADÁKOVÁ, Zdeněk FARKA, Steven MASCREZ, Damien EGGERMONT, Giorgia PURCARO and Tomáš KAŠPAROVSKÝ. Changes in the fatty acid profiles and health indexes of bovine colostrum during the first days of lactation and their impact on human health. Food Chemistry. Elsevier, 2024, vol. 448, August 2024, p. 1-9. ISSN 0308-8146. Available from: https://dx.doi.org/10.1016/j.foodchem.2024.139042.

ŠPAČKOVÁ, Anna, Ondřej VÁVRA, Tomáš RAČEK, Václav BAZGIER, David SEHNAL, Jiří DAMBORSKÝ, Radka SVOBODOVÁ, David BEDNÁŘ and Karel BERKA. ChannelsDB 2.0: a comprehensive database of protein tunnels and pores in AlphaFold era. Nucleic Acids Research. Oxford University Press, 2024, vol. 52, D1, p. "D413"-"D418", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1012.

VÍŠKOVÁ, Pavlína, Eva IŠTVÁNKOVÁ, Jan RYNEŠ, Šimon DŽATKO, Tomáš LOJA, Martina LENARČIČ ŽIVKOVIC, Riccardo RIGO, Roberto EL-KHOURY, Israel SERRANO-CHACON, Masad J DAMHA, Carlos GONZALEZ, Jean-Louis MERGNY, Silvie TRANTÍRKOVÁ and Lukáš TRANTÍREK. In-cell NMR suggests that DNA i-motif levels are strongly depleted in living human cells. Nature Communications. Berlin: Nature, 2024, vol. 15, No 1, 12 pp. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-024-46221-y.

BARTOŠ, Ladislav, Anant K. MENON and Robert VÁCHA. Insertases scramble lipids: Molecular simulations of MTCH2. Structure. 2024, vol. 2024, No 32, p. 505-510. Available from: https://dx.doi.org/10.1016/j.str.2024.01.012.

ŠÍSTKOVÁ, Jana, Tatiana FIALOVA, Emil SVOBODA, Kateřina VRCHOVECKÁ, Martin UHER, Kristyna CIHALOVA, Jan PŘIBYL, Antonin DLOUHY and Monika PÁVKOVÁ GOLDBERGOVÁ. Insight into antibacterial effect of titanium nanotubular surfaces with focus on Staphylococcus aureus and Pseudomonas aeruginosa. Scientific Reports. Berlin: NATURE RESEARCH, 2024, vol. 14, No 1, p. 1-20. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-024-68266-1.

LI, Xiaochun, Jan ČECHAL, Lubomír ŠPAŇHEL, Siro TOSCANI, Jakub MARTINÍK, Radka OBOŘILOVÁ and Libuše TRNKOVÁ. Intriguing properties of graphite/polysiloxane composite-based pencil electrodes. Electrochimica Acta. Oxford: Elsevier, 2024, vol. 475, January, p. 1-12. ISSN 0013-4686. Available from: https://dx.doi.org/10.1016/j.electacta.2023.143615.

ROŠINEC, Adrián. Introduction to the new generation EGI container execution platform. In EGI Webinar programme 2024. 2024. Available from: https://dx.doi.org/10.5281/zenodo.10566759.

MRÁČKOVÁ, Martina, Radek MAREČEK, Jiří MEKYSKA, Milena KOŠŤÁLOVÁ and Irena REKTOROVÁ. Levodopa may modulate specific speech impairment in Parkinson's disease: an fMRI study. Journal of Neural Transmission. Vienna: SPRINGER, 2024, vol. 131, No 2, p. 181-187. ISSN 0300-9564. Available from: https://dx.doi.org/10.1007/s00702-023-02715-5.

SMOLKO, Martin, Ondrej KOVÁČ, Anna VYHLÍDALOVÁ KOTRBOVÁ, Nina BÖHMEOVÁ, Anežka CELÁ, Jan KOTOUČEK, Karel SOUČEK, Vítězslav BRYJA and Vendula HLAVÁČKOVÁ POSPÍCHALOVÁ. Lipidomic analysis of tetraspanin-deficient extracellular vesicles. In XXVII. BIOLOGICKÉ DNY - TKÁŇOVÉ MIKROPROSTŘEDÍ. 2024.

SMOLKO, Martin, Ondrej KOVÁČ, Anna VYHLÍDALOVÁ KOTRBOVÁ, Nina BÖHMEOVÁ, Anežka CELÁ, Jan KOTOUČEK, Karel SOUČEK, Vítězslav BRYJA and Vendula HLAVÁČKOVÁ POSPÍCHALOVÁ. Lipidomic profiling of extracellular vesicles from tetraspanin-deficient cell lines. In ASEV-CzeSEV Joint Meeting on Extracellular Vesicles. 2024.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. LMI-10: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.t45hr-bcw17.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. LMI-30: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.kgb8j-r5f84.

SKLÁDAL, Petr and Zdeněk FARKA. Luminescent photon-upconversion nanoparticles with advanced functionalization for smart sensing and imaging. Microchimica Acta. Springer-Verlag GmbH Austria, 2024, vol. 191, No 9, p. 1-15. ISSN 0026-3672. Available from: https://dx.doi.org/10.1007/s00604-024-06615-7.

SVOBODA, Tomáš. MAFILDB - technická realizace (MAFILDB - technical implementation). In FAIR data pro uživatele CF MAFIL. 2024.

ZIKMUNDOVÁ, Eva, Dorota SKLENÁROVÁ, Eva KOČÍ, Terezie ZATLOUKALOVÁ, Tereza BAČOVÁ, Ekaterina MAKHNEVA, Daniel HOLUB, Eliška MACHÁČOVÁ, Hana KOPŘIVOVÁ, Karolína VYTISKOVÁ, Pavel POŘÍZKA, Karel NOVOTNÝ, Petr SKLÁDAL, Zdeněk FARKA and Jozef KAISER. Magnetic microbead-based upconversion immunoassay with laser-induced breakdown spectroscopy readout for the detection of prostate-specific antigen. Microchimica Acta. Vienna: Springer Nature, 2024, vol. 191, No 656, p. 1-10. ISSN 0026-3672. Available from: https://dx.doi.org/10.1007/s00604-024-06743-0.

AKITA, Masaki, Paul GIRVAN, Mário ŠPÍREK, Jiří NOVÁČEK, David RUEDA, Zbyněk PROKOP and Lumír KREJČÍ. Mechanism of BCDX2-mediated RAD51 nucleation on short ssDNA stretches and fork DNA. Nucleic acids research. Oxford: Oxford University Press, 2024, 15 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkae770.

NOVOTNÝ, Jan, Markéta MUNZAROVÁ and Radek MAREK. Mechanisms of Ligand Hyperfine Coupling in Transition-Metal Complexes: σ and π Transmission Pathways. Inorganic Chemistry. American Chemical Society, 2024, vol. 63, No 19, p. 8580-8592. ISSN 0020-1669. Available from: https://dx.doi.org/10.1021/acs.inorgchem.3c04425.

KHODAM HAZRATI, Mehrnoosh and Robert VÁCHA. Membrane Adsorption Enhances Translocation of Antimicrobial Peptide Buforin 2. Journal of Physical Chemistry B. WASHINGTON: American Chemical Society, 2024, vol. 128, No 35, p. 8469-8476. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.4c04338.

PEŠL, Martin, Filip SVĚRÁK, Daniil KABANOV, Šimon KLIMOVIČ, Deborah BECKEROVÁ, Vladimír ROTREKL and Jan PŘIBYL. Microphysiological Analysis of Cardiomyocyte Function in 3D Organoids. In Multimodal Microscopy Workshop: Probing the Triad of Structure, Mechanics, and Chemistry in Biological Systems2024. 2024. ISBN 978-80-280-0535-1.

OLEJKOVÁ, Tereza, Lucia VOJTĚCHOVÁ, Zuzana HAYEK, Hana JEDLIČKOVÁ and Iva SLANINOVÁ. Mucous membrane pemphigoid diagnostics with western blot analysis. In International Pemphigus & Pemphigoid Foundation Meeting. 2024.

PŘIBYL, Jan, Radka OBOŘILOVÁ and Šimon KLIMOVIČ. Multimodal Microscopy Workshop: Probing the Triad of Structure, Mechanics, and Chemistry in Biological Systems. 1., elektronické vyd. Brno: Masarykova univerzita, 2024. ISBN 978-80-280-0536-8.

PŘIBYL, Jan, Radka OBOŘILOVÁ and Šimon KLIMOVIČ. Multimodal Microscopy Workshop: Probing the Triad of Structure, Mechanics, and Chemistry in Biological Systems. 1st ed. Brno: Masarykova univerzita, 2024. ISBN 978-80-280-0535-1.

FAJTLOVÁ, Šárka, Eliška JANÍČKOVÁ, Barbora TRUKSOVÁ, Karolína ŠUPEJOVÁ, Jan PŘIBYL, Radka OBOŘILOVÁ and Šimon KLIMOVIČ. Multimodal Microscopy Workshop: Probing the Triad of Structure, Mechanics, and Chemistry in Biological Systems 2024. 2024.

KNIGHT, Andrea, Josef HOUSER, Tomáš OTAŠEVIČ, Vilém JURÁŇ, Václav VYBÍHAL, Martin SMRČKA and Martin PISKÁČEK. Myc 9aaTAD activation domain binds to mediator of transcription with superior high affinity. Molecular Medicine. New York: SPRINGER, 2024, vol. 30, No 1, p. 1-9. ISSN 1076-1551. Available from: https://dx.doi.org/10.1186/s10020-024-00896-7.

BLASCO, Sofia, Lukáš SUKENÍK and Robert VÁCHA. Nanoparticle induced fusion of lipid membranes. Nanoscale. CAMBRIDGE: Royal Society of Chemistry, 2024, vol. 16, No 21, p. 10221-10229. ISSN 2040-3364. Available from: https://dx.doi.org/10.1039/d4nr00591k.

FARKA, Zdeněk, Julian BRANDMEIER, Matthias Jürgen MICKERT, Matěj PASTUCHA, Karel LACINA, Petr SKLÁDAL, Tero SOUKKA and Hans-Heiner GORRIS. Nanoparticle-Based Bioaffinity Assays: From the Research Laboratory to the Market. Advanced Materials. Weinheim: Wiley-VCH, 2024, vol. 36, No 3, p. 1-23. ISSN 0935-9648. Available from: https://dx.doi.org/10.1002/adma.202307653.

HAVRÁNKOVÁ, Eva, Karolína ŠELIGOVÁ, Karin RAVASZOVÁ and Alena HOFROVÁ. NOVEL INHIBITORS OF HUMAN CARBONIC ANHYDRASE. In 52nd Conference Synthesis and Analysis of Drugs 2024. 2024.

BARTOŠ, Ladislav, Martina DRABINOVÁ and Robert VÁCHA. Optimizing properties of translocation-enhancing transmembrane proteins. Biophysical Journal. 2024, vol. 123, No 10, p. 1240-1252. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2024.04.009.

NOVOTNÝ, Jan, Stanislav KOMOROVSKY and Radek MAREK. Paramagnetic Effects in NMR Spectroscopy of Transition-Metal Complexes: Principles and Chemical Concepts. Accounts of Chemical Research. American Chemical Society, 2024, vol. 57, No 10, p. 1467-1477. ISSN 0001-4842. Available from: https://dx.doi.org/10.1021/acs.accounts.3c00786.

BIRIUKOV, Denys and Robert VÁCHA. Pathways to a Shiny Future: Building the Foundation for Computational Physical Chemistry and Biophysics in 2050. Online. ACS PHYSICAL CHEMISTRY AU. WASHINGTON: AMER CHEMICAL SOC, 2024, vol. 4, No 4, p. 302-313. Available from: https://dx.doi.org/10.1021/acsphyschemau.4c00003.

BARTOŠ, Ladislav and Robert VÁCHA. Peptide translocation across asymmetric phospholipid membranes. Biophysical Journal. Cell Press, 2024, vol. 123, No 6, p. 693-702. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2024.02.006.

POLÁK, Martin, Irena SELICHAROVA, Michal GRZYBEK, Uenal COSKUN, Jiri JIRACEK and Jiří NOVÁČEK. Peptidomimetics with full antagonistic effect stabilize insulin receptor in novel conformation. In Final iNEXT-discovery consortium meeting and 4 th symposium on recent advances in cryo-EM. 2024. ISBN 978-80-280-0560-3.

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PAUL, Shib Shankar, Jan NOVOTNÝ, Jakub JAKUBEC, Kateřina PETRLÁKOVÁ, Pia Yasmine JURČEK, Klára RAŠKOVÁ, Michaela KUCHYNKA, Michal MASAŘÍK, Petr KULHÁNEK and Radek MAREK. Revealing the Effect of Host-Guest Complementarity in Supramolecular Monofunctional Platinum(II) Drugs. Inorganic Chemistry Frontiers. Royal Society of Chemistry, 2024, vol. 11, No 23, p. 8510-8525. ISSN 2052-1553. Available from: https://dx.doi.org/10.1039/D4QI02012J.

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KEOWN, Jeremy, Alaa BAAZAOUI, Marek ŠEBESTA, Richard ŠTEFL, Loic CARRIQUE, Ervin FODOR and Jonathan M GRIMES. Structural and functional characterization of the interaction between the influenza A virus RNA polymerase and the CTD of host RNA polymerase II. Journal of Virology. WASHINGTON: American Society for Microbiology, 2024, vol. 98, No 5, p. 1-15. ISSN 0022-538X. Available from: https://dx.doi.org/10.1128/jvi.00138-24.

PIPIER, Angélique, Titouan CHETOT, Apollonia KALAMATIANOU, Nicolas MARTIN, Maëlle CAROFF, Sébastien BRITTON, Nicolas CHÉRON, Lukáš TRANTÍREK, Anton GRANZHAN and David MONCHAUD. Structural Optimization of Azacryptands for Targeting Three-Way DNA Junctions. ANGEWANDTE CHEMIE-INTERNATIONAL EDITION. WEINHEIM: WILEY-V C H VERLAG GMBH, 2024. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202409780.

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VALENTOVÁ, Lucie, Tibor FÜZIK, Jiří NOVÁČEK, Zuzana HLAVENKOVÁ, Jakub POSPÍŠIL and Pavel PLEVKA. Structure and replication of <i>Pseudomonas aeruginosa</i> phage JBD30. EMBO Journal. Hoboken (USA): WILEY-BLACKWELL, 2024, 22 pp. ISSN 0261-4189. Available from: https://dx.doi.org/10.1038/s44318-024-00195-1.

ČERNÝ, Martin, Viktor BARTOŠÍK, Markéta PETRŮJOVÁ, Hana ŠANDEROVÁ, Libor KRÁSNÝ and Lukáš ŽÍDEK. Tale of tails; structural comparison of the RNA polymerase δ-subunits. In XX Discussions in Structural Molecular Biology and 7th User Meeting of CIISB. 2024. ISSN 1211-5894.

IĽKOVIČOVÁ, Lucia, Thomas Peter FELLMETH and Jozef HRITZ. The effect of phosphoserine 324 on the paired helical filaments of tau protein. In Instruct Biennial Structural Biology Conference. 2024.

PARVEEN, Kumar, Rautiainen MIKKO, Jan NOVOTNÝ, Ward JAS S., Radek MAREK, Rissanen KARI and Puttreddy RAKESH. The impact of ortho-substituents on Bonding in Silver(I) and Halogen(I) complexes of 2-Mono- and 2,6-Disubstituted Pyridines: An In-depth Experimental and Theoretical Study. Chemistry - A European Journal. Wiley, 2024, vol. 30, No 13, p. 1-10. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.202303643.

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ANASTASINA, Maria, Tibor FÜZIK, Aušra DOMANSKA, Lauri Ilmari Aurelius PULKKINEN, Lenka ŠMERDOVÁ, Petra POKORNÁ FORMANOVÁ, Petra STRAKOVÁ, Jiří NOVÁČEK, Daniel RŮŽEK, Pavel PLEVKA and Sarah Jane BUTCHER. The structure of immature tick-borne encephalitis virussupports the collapse model of flavivirus maturation. 2024. Available from: https://dx.doi.org/10.1126/sciadv.adl1888.

MANCA, Gabriele, Francesco BARZAGLI, Jakub NAGY, Markéta MUNZAROVÁ, Maurizio PERUZZINI and Andrea IENCO. Unraveling the mechanism and the role of hydrogen bonds in CO₂ capture by diluent-free amine sorbents through a combination of experimental and theoretical methods. Fuel. THE BOULEVARD, LANGFORD LANE, KIDLINGTON: ELSEVIER SCI LTD, 2024, vol. 378, DEC, p. 132859-132868. ISSN 0016-2361. Available from: https://dx.doi.org/10.1016/j.fuel.2024.132859.

JURČEK, Ondřej, Subhasis CHATTOPADHYAY, Elina KALENIUS, Juha M. LINNANTO, Anniina KIESILÄ, Pia Yasmine JURČEK, Petr RADIMĚŘSKÝ and Radek MAREK. Unsymmetric Chiral Ligands for Large Metallo-Macrocycles: Selectivity of Orientational Self-Sorting. Angewandte Chemie International Edition. Wiley, 2024, vol. 63, No 36, p. e202409134, 8 pp. ISSN 1433-7851. Available from: https://dx.doi.org/10.1002/anie.202409134.

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MÁČALA, Jakub, Ekaterina MAKHNEVA, Antonín HLAVÁČEK, Martin KOPECKÝ, Hans-Heiner GORRIS, Petr SKLÁDAL and Zdeněk FARKA. Upconversion Nanoparticle-Based Dot-Blot Immunoassay for Quantitative Biomarker Detection. Analytical Chemistry. Washington, DC: American Chemical Society, 2024, vol. 96, No 25, p. 10237-10245. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.4c00837.

CASSANI, Marco, Soraia FERNANDES, Jorge Oliver-De La CRUZ, Helena DURIKOVA, Jan VRBSKY, Marek PATOČKA, Veronika HEGROVA, Šimon KLIMOVIČ, Jan PŘIBYL, Doriana DEBELLIS, Petr SKLÁDAL, Francesca CAVALIERI, Frank CARUSO and Giancarlo FORTE. YAP Signaling Regulates the Cellular Uptake and Therapeutic Effect of Nanoparticles. Advanced Science. Wiley-VCH GmbH, 2024, vol. 11, No 2, p. 1-16. ISSN 2198-3844. Available from: https://dx.doi.org/10.1002/advs.202302965.

BIELKOVA, Zuzana, Jan TITIS, Jaromír MAREK, Jan MONCOL, Alena KLOKOCIKOVA, Christoph WESEMANN, Franz RENZ and Cyril RAJNAK. Zero-field splitting in tetracoordinate Co(II) complexes containing heterocyclic aromatic ligands. Journal of Molecular Structure. Amsterdam: Elsevier, 2024, vol. 1295, Jan, p. 1-9. ISSN 0022-2860. Available from: https://dx.doi.org/10.1016/j.molstruc.2023.136667.

NOVOTNÁ, Lucie, Terézia SLANINÁKOVÁ, David PROCHÁZKA, Lukáš HEJTMÁNEK, Adrián ROŠINEC, Jaroslav OĽHA, Katarína GREŠOVÁ, Vlastislav DOHNAL and Matej ANTOL. 3D-af-Surfer: Protein structural embeddings of AlphaFold DB. 2024. Available from: https://dx.doi.org/10.48700/datst.tbws0-hj147.

NOVOTNÝ, Jan and Radek MAREK. 37th Central European NMR Meeting, NMR Valtice 2024. 2024.

FORINOVÁ, Michala, Anna SEIDLOVÁ, Alina PILIPENCO, Nicholas SCOTT LYNN JR., Radka OBOŘILOVÁ, Zdeněk FARKA, Petr SKLÁDAL, Alena SALÁKOVÁ, Monika SPASOVOVÁ, Milan HOUSKA, Libor KALHOTKA and Hana VAISOCHEROVÁ-LÍSALOVÁ. A comparative assessment of a piezoelectric biosensor based on a new antifouling nanolayer and cultivation methods: Enhancing S. aureus detection in fresh dairy products. Current Research in Biotechnology. Elsevier, 2023, vol. 6, November, p. 1-6. ISSN 2590-2628. Available from: https://dx.doi.org/10.1016/j.crbiot.2023.100166.

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BUŠA, Daniel, Martin ČULEN, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, Alois FOLTA and Jiří MAYER. Acute myeloid leukemia suppression by palbociclib and ponatinib in patient-derived xenograft. In 23. Pražské hematologické dny, Praha. 2023.

ŠIMEČKOVÁ, Hana, Radka OBOŘILOVÁ, Matěj PASTUCHA, Jan PŘIBYL, Petr SKLÁDAL, Roman PANTŮČEK, Zdeněk FARKA and Ivana MAŠLAŇOVÁ. Advanced Microscopic and Biosensing Approaches for Monitoring Bacteriophage-Mediated Lysis of Bacteria. In 6th World Congress on Targeting Phage Therapy. 2023.

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LAMOTHE, Lucie, Jennifer R B JENSEN, Hans IENASESCU, Ove J R GUSTAFSSON, Alban GAIGNARD, Dmitry REPCHEVSKY, Radka SVOBODOVÁ, Tomáš RAČEK, Adrián ROŠINEC, Matej ANTOL and Hervé MÉNAGER. An Evaluation of EDAM Coverage in the Tools Ecosystem and Prototype Integration of Galaxy and Workflowhub Systems. BioHackrXiv. 2023, p. 1-10. Available from: https://dx.doi.org/10.37044/osf.io/79kje.

HEJRET, Václav, Nandan Mysore VARADARAJAN, Eva KLIMENTOVÁ, Katarína GREŠOVÁ, Ilektra-Chara GIASSA, Štěpánka VAŇÁČOVÁ and Panagiotis ALEXIOU. Analysis of chimeric reads characterises the diverse targetome of AGO2-mediated regulation. Scientific Reports. Nature Research, 2023, vol. 13, No 1, p. 1-9. ISSN 2045-2322. Available from: https://dx.doi.org/10.1038/s41598-023-49757-z.

APPASAMY, Sri Devan, John BERRISFORD, Romana GÁBOROVÁ, Sreenath NAIR, Stephen ANYANGO, Sergei GRUDININ, Mandar DESHPANDE, David ARMSTRONG, Ivanna PIDRUCHNA, Joseph I. J. ELLAWAY, Grisell Díaz LEINES, Deepti GUPTA, Deborah HARRUS, Mihaly VARADI and Sameer VELANKAR. Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data. Scientific Data. Nature Portfolio, 2023, vol. 10, No 1, p. 1-13. ISSN 2052-4463. Available from: https://dx.doi.org/10.1038/s41597-023-02778-9.

HOUSER, Josef. ARBRE – Association of Resources for Biophysical Research in Europe. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of CIISB. 2023.

HOUSER, Josef. ARBRE–Association of Resources for Biophysical Research in Europe. In Konference Českého biofyzikálního sdružení. 2023.

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ZLATOHURSKA, Maryna, Michaela PROCHÁZKOVÁ, Tibor FÜZIK and Pavel PLEVKA. BACTERIOPHAGE PHI812 HEAD ASSEMBLY IN THE CELLS OF STAPHYLOCOCCUS AUREUS. In NIVB Meeting 2023. 2023.

HOUSER, Josef. Benchmarking in biophysics: Insight from the ARBRE society. In Good Laboratory Practices in Molecular-Scale Biophysics: an ARBRE Symposium. 2023.

MARVANOVÁ, Soňa, Kateřina PĚNČÍKOVÁ, Lenka PÁLKOVÁ, Miroslav CIGANEK, Jiří PETRÁŠ, Anna LNĚNIČKOVÁ, Jan VONDRÁČEK and Miroslav MACHALA. Benzo[b]naphtho[d]thiophenes and naphthylbenzo[b]thiophenes: Their aryl hydrocarbon receptor-mediated activities and environmental presence. Science of The Total Environment. Elsevier, 2023, vol. 879, June 2023, p. 1-12. ISSN 0048-9697. Available from: https://dx.doi.org/10.1016/j.scitotenv.2023.162924.

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ČULEN, Martin, Tomáš LOJA, Daniel BUŠA, Zdeňka HERUDKOVÁ, Jan HÝL, Jakub VLAŽNÝ, K. LIŠKOVÁ, Martin REPKO, Lucy VOJTOVÁ and Jiří MAYER. Biomaterial selection does not affect AML engraftment in humanized ossicles. (Biomaterial selection does not affect AML engraftment in humanized ossicles - conference abstract.). In 12th International Conference Analytical Cytometry, Praha. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. Biophysical Screening Workshop & Dianthus hands-on. 2023.

HOUSER, Josef and Tomáš KLUMPLER. Bio-SAXS Practical Course 2023. 2023.

DROZDOWSKI, Adrian, Natalia JURGA, Dominika PRZYBYLSKA, Julian BRANDMEIER, Zdeněk FARKA, Hans-Heiner GORRIS and Tomasz GRZYB. Bright photon upconversion in LiYbF4:Tm3+@LiYF4 nanoparticles and their application for singlet oxygen generation and in immunoassay for SARS-CoV-2 nucleoprotein. Journal of Colloid and Interface Science. Elsevier, 2023, vol. 649, November 2023, p. 49-57. ISSN 0021-9797. Available from: https://dx.doi.org/10.1016/j.jcis.2023.06.034.

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HOUSER, Josef, Michaela WIMMEROVÁ and Kristýna HROMÁDKOVÁ. CalScreener Workshop: Calorimetric instrument to measure the metabolic response in biological systems. 2023.

PEŠL, Martin, Jan PŘIBYL, Petr DVOŘÁK, Zdeněk STÁREK, Petr SKLÁDAL, Kristián BRAT and Vladimír ROTREKL. Cardiovascular Diseases. Online. In Malgorzata Lekka, Daniel Navajas, Manfred Radmacher and Alessandro Podestà. Mechanics in Diseased Cells and Tissues, Volume 2 Biomedical Applications. Berlin/Boston: Walter de Gruyter GmbH, 2023, p. 137-162. De Gruyter STEM. ISBN 978-3-11-099972-3. Available from: https://dx.doi.org/10.1515/9783110989380-011.

VALENTOVÁ, Lucie, Tibor FÜZIK, Pavel PLEVKA and Jakub POSPÍŠIL. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XXVIII Biennial Conference on Phage/Virus Assembly. 2023.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Carpe pili! Hunting strategy of phage JBD30 revealed by combination of cryo-electron and fluorescent microscopy. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB. 2023.

KOZELKA, Jiří, Yevgen YURENKO, Jan NOVOTNÝ and Radek MAREK. Catalytic Mechanism of Formate Dehydrogenase: Computational Studies. In 14th EBSA Congress. 2023. ISSN 0175-7571.

ČESKÁ, Katarína, Jan PAPEŽ, Hana OŠLEJŠKOVÁ, Ondřej SLABÝ, Lenka RADOVÁ, Tomáš LOJA, Zuzana LIBÁ, Anna SVĚRÁKOVÁ, Milan BRÁZDIL and Štefánia AULICKÁ. CCL2/MCP-1, interleukin-8, and fractalkine/CXC3CL1: Potential biomarkers of epileptogenesis and pharmacoresistance in childhood epilepsy. EUROPEAN JOURNAL OF PAEDIATRIC NEUROLOGY. OXON: ELSEVIER, 2023, vol. 46, September 2023, p. 48-54. ISSN 1090-3798. Available from: https://dx.doi.org/10.1016/j.ejpn.2023.06.001.

HOUSER, Josef and Kateřina HOŠKOVÁ. CEITEC: project-based financing of core facilities. In 2023 Core Technologies for Life Sciences. 2023.

KLIMOVIČ, Šimon, Martin ŠČUREK, Martin PEŠL, Deborah BECKEROVÁ, Šárka JELÍNKOVÁ, Tomáš URBAN, Daniil KABANOV, Zdeněk STÁREK, Markéta BÉBAROVÁ, Jan PŘIBYL, Vladimír ROTREKL and Kristián BRAT. CENA VÝBORU ČESKÉ PNEUMOLOGICKÉ A FTIZEOLOGICKÉ SPOLEČNOSTI ČLS JEP ZA 1. NEJLEPŠÍ PUBLIKOVANOU PRÁCI V KATEGORII PUBLIKACE S IMPAKT FAKTOREM POD 35 LET V ROCE 2022: Aminophylline Induces Two Types of Arrhythmic Events in Human Pluripotent Stem Cell–Derived Cardiomyocytes. VÝBOR ČESKÉ PNEUMOLOGICKÉ A FTIZEOLOGICKÉ SPOLEČNOSTI ČLS JEP, 2023.

PLEVKA, Pavel, Jan PŘIBYL and Šimon KLIMOVIČ. CF Nanobio User Meeting. 2023.

PŘIBYL, Jan. CF Nanobiotechnology - Laboratory tour 2023 - 2024. 2023.

SVOBODA, Tomáš, Aleš KŘENEK, Łukasz OPIOŁA, Andrea MANZI and Josef HANDL. Cloudification of scientific experimental data using Onedata. In EGI Conference 2023. 2023.

HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Jan VERNER, Miroslav BOUDNÝ, Gabriela MLADONICKÁ PAVLASOVÁ, Tomáš LOJA, Daniel FILIP, Josef VEČEŘA, Květoslava MATULOVÁ, Hana SKUHROVÁ FRANCOVÁ, Sonali SHARMA, Laura ONDRIŠOVÁ, Veronika PALUŠOVÁ, Lucy VOJTOVÁ, Leoš KŘEN, Michael DOUBEK and Marek MRÁZ. Coculture model with CD40L, IL4 and IL21 for study chronic lymphocytic leukemia proliferation. In CEITEC PhD Conference 2023, Brno. 2023.

LACINA, Karel, Jakub VĚŽNÍK, Jakub SOPOUŠEK, Zdeněk FARKA, Veronika LACINOVÁ and Petr SKLÁDAL. Concentration and diffusion of the redox probe as key parameters for label-free impedimetric immunosensing. Bioelectrochemistry. Elsevier, 2023, vol. 149, February 2023, p. 1-6. ISSN 1567-5394. Available from: https://dx.doi.org/10.1016/j.bioelechem.2022.108308.

LASORSA, Alessia, Krishnendu BERA, Idir MALKI, Elian DUPRE, Francois-Xavier CANTRELLE, Hamida MERZOUGUI, Davy SINNAEVE, Xavier HANOULLE, Jozef HRITZ and Isabelle LANDRIEU. Conformation and Affinity Modulations by Multiple Phosphorylation Occurring in the BIN1 SH3 Domain Binding Site of the Tau Protein Proline-Rich Region. Biochemistry. Washington: American Chemical Society, 2023, vol. 62, No 11, p. 1631-1642. ISSN 0006-2960. Available from: https://dx.doi.org/10.1021/acs.biochem.2c00717.

BÍŇOVSKÝ, Ján, Marta ŠIBOROVÁ, Jiří NOVÁČEK, Karel ŠKUBNÍK, Tibor BOTKA, Martin BENEŠÍK, Roman PANTŮČEK, MARK VAN RAAIJ and Pavel PLEVKA. Conformational changes in baseplate required for genome delivery of S. aureus phage phi812. In 2nd Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora, Czech Chemical Society Symposium Series vol. 21, no. 5, s. 177-256. 2023. ISSN 2336-7210.

BERA, Krishnendu, Isabelle LANDRIEU and Jozef HRITZ. Conformational changes upon phosphorylation of proline rich region of tau(210-240) peptide using molecular dynamic simulation. In XIX Discussions in Structural Molecular Biology and 6th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology), Nove Hrady, South Bohemia, 23-25 March 2023. 2023.

BUČEKOVÁ, Gabriela, Viktoriia DOSHCHENKO, Vladimír HORSKÝ and Radka SVOBODOVÁ. Conformational study of small carbon rings in ligands. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

PŘIBYL, Jan and Kristýna HROMÁDKOVÁ. Core Facility Nanobiotechnology: Where we are and where to go next…. Brno. 2023.

SMOLKO, Martin, Anna VYHLÍDALOVÁ KOTRBOVÁ, Anežka CELÁ, Jan KOTOUČEK, Karel SOUČEK, Vítězslav BRYJA and Vendula HLAVÁČKOVÁ POSPÍCHALOVÁ. CRISPR CAS9 ENGINEERED TETRASPANIN DEFICIENT CELL LINES FOR THE ANALYSIS OF EXTRACELLULAR VESICLES. In 12th International Conference Analytical Cytometry. 2023.

HOUSER, Josef. Crystallography Loops: Handling and Maintenance. 2023.

PŘIBYL, Jan and Eliška JANÍČKOVÁ. Cytoplasmic biopsies for the temporal profiling of single cells by Fluidic Force Microscopy. 2023.

DEB, Rahul, Ivo KABELKA, Jan PŘIBYL and Robert VÁCHA. De novo design of peptides that form transmembrane barrel pores killing antibiotic resistant bacteria. In BPS Annual Meeting 2023. 2023.

ZAFAR, Hassan, Ludmila VESELÁ, Ahmed Adel Ibrahim Hassona HASSAN, Xueliang GE, Suparna SANYAL and Gabriel DEMO. DECIPHERING THE FUNCTIONALITY OF THE UNSTRUCTURED N-TERMINAL DOMAIN OF THE BACTERIAL INITIATION FACTOR 2. In NIVB meeting 2023. 2023. ISSN 2336-7210.

., Indu, Jozef HRITZ, Václav BRÁZDA, Rajesh KUMAR and Krishnendu BERA. Designing of Insecticides Against Bemisia tabaci targeting ecdysone receptor. In BERA, Krishnendu. 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

BLASCO, Sofia, Lukáš SUKENÍK and Robert VÁCHA. Designing spheroidal nanoparticles to induce membrane fusion of liposomes. In EMBO Workshop Mechanisms of membrane fusion 2023. 2023.

KADEŘÁVEK, Pavel, Vojtěch ZAPLETAL, Nicola SALVI, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Lukáš ŽÍDEK, Martin BLACKLEDGE and Fabien FERRAGE. Detailed insight into dynamics of C-terminal domain of δ subunit of RNA polymerase from Bacillus subtilis using high-resolution relaxometry. In IDP Community F2F/hybrid meeting. 2023.

ZAPLETAL, Vojtěch, Nicola SALVI, Andrea FLAMM, Zuzana JASEŇÁKOVÁ, Dennis KURZBACH, Mateos BORJA, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Jozef HRITZ, Robert KONRAT, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Detailed insight into dynamics of intrinsically disordered proteins using high-resolution relaxometry. 2023.

SKLENÁROVÁ, Dorota, Ekaterina MAKHNEVA, Julian BRANDMEIER, Hans-Heiner GORRIS and Zdeněk FARKA. Detection of prostate-specific antigen utilizing immunomagnetic assay with upconversion nanoparticles. In 23rd Joint meeting of Biophysical Chemists and Electrochemists 2023. 2023.

MACHÁČOVÁ, Eliška, Julian BRANDMEIER, Ekaterina MAKHNEVA, Antonín HLAVÁČEK, Hans-Heiner GORRIS and Zdeněk FARKA. Detection of protein biomarkers using lateral flow immunoassays based on photon-upconversion nanoparticles. In CECE 2023. 2023.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylations of proteins and cells. In XXIInd Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

ZAPLETAL, David, Karel KUBÍČEK, Petr SVOBODA and Richard ŠTEFL. Dicer structure and function: conserved and evolving features. EMBO reports. Wiley, 2023, vol. 24, No 7, p. 1-13. ISSN 1469-221X. Available from: https://dx.doi.org/10.15252/embr.202357215.

BRANDMEIER, Julian, Natalia JURGA, Tomasz GRZYB, Antonín HLAVÁČEK, Radka OBOŘILOVÁ, Petr SKLÁDAL, Zdeněk FARKA and Hans-Heiner GORRIS. Digital and Analog Detection of SARS-CoV-2 Nucleocapsid Protein via an Upconversion-Linked Immunosorbent Assay. Analytical Chemistry. Washington, DC: American Chemical Society, 2023, vol. 95, No 10, p. 4753-4759. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.2c05670.

KUNTOVÁ, Lucie, Radka OBOŘILOVÁ, Vilém SVOJANOVSKÝ, Zdeněk FARKA, Jan PREISLER, Roman PANTŮČEK and Ivana MAŠLAŇOVÁ. Direct detection methods for monitoring of therapeutic staphylococcal bacteriophages in clinical samples. In 2nd Meeting of the National Institute of Virology and Bacteriology (NIVB) in Kutná Hora, Czech Chemical Society Symposium Series vol. 21, no. 5, s. 177-256. 2023. ISSN 2336-7210.

MAŠLAŇOVÁ, Ivana, Lucie KUNTOVÁ, Radka OBOŘILOVÁ, Vilém SVOJANOVSKÝ, Zdeněk FARKA, Jan PREISLER and Roman PANTŮČEK. Direct detection methods for monitoring of therapeutic Staphylococcus bacteriophages in clinical samples. In Viruses of Microbes 2023, 2-7 July 2023 Tbilisi, Georgia. International Society for Viruses of Microorganisms. 2023.

MACEDO, Diego H, Danyil GRYBCHUK, Jana REZNAROVA, Jan VOTYPKA, Donnamae KLOCEK, Tatiana YURCHENKO, Jan SEVCIK, Alice MAGRI, Michaela Urda DOLINSKA, Kristina ZAHONOVA, Julius LUKES, Elena SERVIENE, Alexandra JASZAYOVA, Saulius SERVA, Marina N MALYSHEVA, Alexander O FROLOV, Vyacheslav YURCHENKO and Alexei Yu KOSTYGOV. Diversity of RNA viruses in the cosmopolitan monoxenous trypanosomatid Leptomonas pyrrhocoris. BMC Biology. London: BMC, 2023, vol. 21, No 1, p. 1-18. ISSN 1741-7007. Available from: https://dx.doi.org/10.1186/s12915-023-01687-y.

ŠKOLÁKOVÁ, Petra, Martin GAJARSKÝ, Jan PALACKÝ, Denis ŠUBERT, Daniel RENČIUK, Lukáš TRANTÍREK, Jean-Louis MERGNY and Michaela VORLICKOVA. DNA i-motif formation at neutral pH is driven by kinetic partitioning. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2950-2962. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad119.

FOJTOVÁ, Lucie, Šárka FAJTLOVÁ and Jiří NOVÁČEK. Dny elektronové mikroskopie 2023 (Days of Electron Microscopy 2023). 2023.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis beyond its major state conformation. In Inaugural Biochemistry Symposium Puzzles of (Bio)molecular Structure and Dynamics: NMR spectroscopy and complementary approaches. 2023.

PEŠL, Martin, Roberto PIVATO, Šimon KLIMOVIČ, Daniil KABANOV, Filip SVĚRÁK, Jan PŘIBYL, Zdeněk STÁREK and Vladimír ROTREKL. DUAL CARDIOMYOCYTE CLUSTER DETECTION OF THE DIFFERENT TYPES OF ARRHYTHMOGENIC POTENTIAL OF DRUGS. In XXXI. sjezd ČKS 2023. 2023.

PAULENOVÁ, Eva, Josef HOUSER, Filip MELICHER and Michaela WIMMEROVÁ. Dual specificity of PLL2 lectin. 2023. ISSN 1211-5894.

HEJTMÁNEK, Lukáš, Adrián ROŠINEC and Sebastian LUNA-VALERO. Easy Deployment of Dask and Jupyter Notebooks on Managed Kubernetes. In EGI Conference 2023. 2023.

VRCHOVECKÁ, Kateřina, Jan KUTA, Martin UHER, Jan PŘIBYL and Monika PÁVKOVÁ GOLDBERGOVÁ. Effect of titanium nanostructured surface on fibroblast behavior. Journal of Biomedical Materials Research Part A. HOBOKEN: WILEY111, 2023, vol. 111, No 9, p. 1333-1343. ISSN 1549-3296. Available from: https://dx.doi.org/10.1002/jbm.a.37531.

BIRIUKOV, Denys and Matti JAVANAINEN. Efficient Simulations of Solvent Asymmetry Across Lipid Membranes Using Flat-Bottom Restraints. Journal of Chemical Theory and Computation. Washington DC: American Chemical Society, 2023, vol. 19, No 18, p. 6332-6341. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/acs.jctc.3c00614.

PEŠL, Martin, Deborah BECKEROVÁ, Filip SVĚRÁK, Jan PŘIBYL, Šimon KLIMOVIČ, Daniil KABANOV and Vladimír ROTREKL. Electromechanical cell-based biosensors for drug and disease of 3D cardiac models. In Organoids: modelling organ development and disease in 3D culture, EMBO | EMBL Symposium. 2023.

VEVERKA, Pavel, Tomáš BROM, Tomáš JANOVIČ, Martin STOJASPAL, Matyáš PINKAS, Jiří NOVÁČEK and Ctirad HOFR. Electron microscopy reveals toroidal shape of master neuronal cell differentiator REST – RE1-silencing transcription factor. Computational and Structural Biotechnology Journal. Elsevier, 2023, vol. 21, Dec, p. 731-741. ISSN 2001-0370. Available from: https://dx.doi.org/10.1016/j.csbj.2022.12.026.

SUKENÍK, Lukáš, Liya MUKHAMEDOVA, Michaela PROCHÁZKOVÁ, Karel ŠKUBNÍK, Pavel PLEVKA and Robert VÁCHA. Elucidating the Mechanisms of Genome Release in Picornaviruses using Cryo-EM and Coarse-Grained Simulations. In EBSA Congress 2023. 2023.

VAŇÁČOVÁ, Štěpánka and Šárka FAJTLOVÁ. EMBO workshop - Eukaryotic RNA turnover and viral biology. 2023.

TURNER, Jack, Sanja ABBOTT, Neli FONSECA, Lucas CARRIJO, Amudha Kumari DURAISAMY, Osman SALIH, Zhe WANG, Gerard J KLEYWEGT, Kyle L MORRIS, Ardan PATWARDHAN, Stephen K BURLEY, Gregg CRICHLOW, Zukang FENG, Justin W FLATT, Sutapa GHOSH, Brian P HUDSON, Catherine L LAWSON, Yuhe LIANG, Ezra PEISACH, Irina PERSIKOVA, Monica SEKHARAN, Chenghua SHAO, Jasmine YOUNG, Sameer VELANKAR, David ARMSTRONG, Marcus BAGE, Wesley Morellato BUENO, Genevieve EVANS, Romana GÁBOROVÁ, Sudakshina GANGULY, Deepti GUPTA, Deborah HARRUS, Ahsan TANWEER, Manju BANSAL, Vetriselvi RANGANNAN, Genji KURISU, Hasumi CHO, Yasuyo IKEGAWA, Yumiko KENGAKU, Ju Yaen KIM, Satomi NIWA, Junko SATO, Ayako TAKUWA, Jian YU, Jeffrey C HOCH, Kumaran BASKARAN, Wenqing XU, Weizhe ZHANG and Xiaodan MA. EMDB-the Electron Microscopy Data Bank. Nucleic acids research. Oxford: Oxford University Press, 2023, vol. 52, Jan, p. 456-465. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad1019.

HOFROVÁ, Alena, Karin RAVASZOVÁ, Radek CRHA, Adela FEJFAROVÁ, Pavel SRB, Jiri BRYNDA, Pavlína MALOY ŘEZÁČOVÁ and Jozef HRITZ. Employment of 5D non-uniform sampling NMR assignment strategy to assign disordered protein regions with repetitive motifs. In EUROMAR conference. 2023.

ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Aleš KŘENEK and Radka SVOBODOVÁ. Enhancing Data Accessibility: Strategies and Tools for Effective Metadata Management. In IBERGRID 2023. 2023.

KLOCEK, Donnamae, Danyil GRYBCHUK, Lucie TICHA, Jan VOTYPKA, Petr VOLF, Alexei Yu KOSTYGOV and Vyacheslav YURCHENKO. Evolution of RNA viruses in trypanosomatids: new insights from the analysis of Sauroleishmania. Parasitology research. NEW YORK: Springer Berlin Heidelberg, 2023, vol. 122, No 10, p. 2279-2286. ISSN 0932-0113. Available from: https://dx.doi.org/10.1007/s00436-023-07928-x.

EVIC, Valentina, Ruzica SOIC, Marko MOCIBOB, Mario KEKEZ, Josef HOUSER, Michaela WIMMEROVÁ, Dubravka MATKOVIĆ-ČALOGOVIĆ, Ita GRUIC-SOVULJ, Ivana KEKEZ and Jasmina ROKOV-PLAVEC. Evolutionarily conserved cysteines in plant cytosolic seryl-tRNA synthetase are important for its resistance to oxidation. FEBS Letters. Amsterdam: Elsevier Science, 2023, vol. 597, No 23, p. 2975-2992. ISSN 0014-5793. Available from: https://dx.doi.org/10.1002/1873-3468.14748.

PLEVKA, Pavel, Jaromír LITERÁK and Ester JAROUR. Excursion for Slovak high school students. Brno, 2023.

PLEVKA, Pavel and Eliška HANDLÍŘOVÁ. Exkurze Gymnázia Tišnov (Guided tour for students of high school Tišnov). Brno, 2023.

PLEVKA, Pavel and Milan MICHL. Exkurze studentů Univerzity Palackého v Olomouci (Guided tour for students of Palacký University Olomouc). 2023.

PLEVKA, Pavel. Exkurze studujících z Biskupského gymnázia Žďár nad Sázavou (Excursion of students from Bishop's High School Žďár nad Sázavou). 2023.

PLEVKA, Pavel, Eliška HANDLÍŘOVÁ and Eliška JANÍČKOVÁ. Exkurze studujících z Gymnázia Škrobárova, Košice (Guided tour of students from high School Škrobárova, Košice). 2023.

PORUBSKÁ, Jana, Veronika HORSKÁ, Vladimír HORSKÝ and Radka SVOBODOVÁ. Exploring the relationship between structural quality and journal impact factor. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

ČERNÁ, Eva, Jana BRTNÍKOVÁ, Lukáš VACEK, Filip RŮŽIČKA, Břetislav LIPOVÝ, Marie KOMÁRKOVÁ, Pavel PLEVKA, Roman PANTŮČEK and Lucy VOJTOVÁ. Flexible and transparent Gum Karaya-based hydrogel film as a matrix for wound healing enriched with antibacterial bacteriophages and antiseptics to suppress and eliminate non-healing bacterial infections. In 19th International Conference on Polysaccharides-Glycoscience. Ústav sacharidů a cereálií VŠCHT a Česká chemická společnost, Praha. 2023.

NOVOTNÝ, Jan, Jan CHYBA, Anna HRUZÍKOVÁ, Petra PIKULOVÁ, Aliaksandra KURSIT, Michal KNOR, Kateřina MARKOVÁ, Jaromír MAREK, Pia Yasmine JURČEK, Ondřej JURČEK and Radek MAREK. Flipping hosts in hyperfine fields of paramagnetic guests. Cell Reports Physical Science. Cell Press, 2023, vol. 4, No 7, p. 101461-101475. ISSN 2666-3864. Available from: https://dx.doi.org/10.1016/j.xcrp.2023.101461.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry. In ASHG Annual Meeting 2023. 2023.

KONEČNÁ, Kateřina, Lukáš TICHÝ, Tomáš LOJA, Tereza PŘEROVSKÁ and Lenka FAJKUSOVÁ. Functional analysis of LDLR variants using flow cytometry and western blot. In XXII. setkání biochemiků a molekulárních biologů. 2023.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation. In CRISPR as a research tool in cancer and regenerative medicine, Stockholm, Švédsko. 2023.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Genome-wide CRISPR/Cas9 knockout screening revealed genes involved in CD20 regulation in rituximab-resistant cells. In PhD and PostDoc RETREAT, Sněžné, Milovy. 2023.

HAŠANOVÁ, Zdenka, Veronika KLÁPŠŤOVÁ, Odil PORRUA, Richard ŠTEFL and Marek ŠEBESTA. Human senataxin is a bona fide R-loop resolving enzyme and transcription termination factor. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, No 6, p. 2818-2837. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad092.

ŠPAČKOVÁ, Anna, Ondřej VÁVRA, Tomáš RAČEK, Václav BAZGIER, David SEHNAL, Jiří DAMBORSKÝ, Radka SVOBODOVÁ and Karel BERKA. ChannelsDB 2.0: A Comprehensive Database of Protein Tunnels and Pores in AlphaFold Era. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

KOMÁRKOVÁ, Marie, Martin BENEŠÍK, Kateřina ROSÍKOVÁ, Tibor BOTKA, Lucie VALENTOVÁ, Pavel PLEVKA, Milada DVOŘÁČKOVÁ, Filip RŮŽIČKA and Roman PANTŮČEK. Characterisation of bacteriophages with therapeutic potential against healthcare-associated and multidrug-resistant Pseudomonas aeruginosa. In Studentská vědecká konference MUNI PHARM 2023. Masarykova univerzita, Brno. 2023.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterisation of invisible conformation of domain 1.1 of σA factor of RNA polymerase from Bacillus subtilis. In 19th European Magnetic Resonance Congress, EUROMAR 2023. 2023.

NAVRÁTILOVÁ, Polina, Jan EMMER, Tomáš LOJA and Monika PÁVKOVÁ GOLDBERGOVÁ. Characterisation of Macrophage Response to Nickel Nanoparticles and Ions Released from Biomaterials. In MATEDAS 2023, 17th INTERNATIONAL CONFERENCE ON MATERIALS AND TECHNOLOGIES FOR DEFENSE AND SECURITY. 2023.

TUŽINČIN, Dávid, Petr PADRTA, Hana ŠANDEROVÁ, Alžbeta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK and Pavel KADEŘÁVEK. Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of σ A factor of RNA polymerase from Bacillus subtilis. Proteins: Structure, Function and Bioinformatics. Wiley, 2023, vol. 91, No 9, p. 1276-1287. ISSN 0887-3585. Available from: https://dx.doi.org/10.1002/prot.26531.

SCHINDLER, Ondřej, Karel BERKA, Alessio CANTARA, Aleš KŘENEK, Dominik TICHÝ, Tomáš RAČEK and Radka SVOBODOVÁ. αCharges: partial atomic charges for AlphaFold structures in high quality. Nucleic Acids Research. Oxford: Oxford University Press, 2023, vol. 51, W1, p. "W11"-"W16", 6 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad349.

DOSTÁLOVÁ, Lenka, Aneta LEDEREROVÁ, Helena PESCHELOVÁ, Tomáš LOJA and Michal ŠMÍDA. Identification of novel targets that upregulate CD20 expression in rituximab-resistant cells with the use of genomewide CRISPR screening. In XX. International Workshop on CLL (iwCLL 2023), Boston, USA. 2023.

SILVERI, Filippo, Radka OBOŘILOVÁ, Jakub MÁČALA, Dario COMPAGNONE and Petr SKLÁDAL. Impedimetric immunosensor for microalbuminuria based on a WS2/Au water-phase assembled nanocomposite. Microchimica Acta. Wien: Springer, 2023, vol. 190, No 8, p. 1-12. ISSN 0026-3672. Available from: https://dx.doi.org/10.1007/s00604-023-05873-1.

WILLIEM, Ereny S., Ahmed B. M. IBRAHIM, S. ABD ELKHALIK, Jaromír MAREK and S. M. ABBAS. In vitro biological activity of cobalt(II) complexes with salicylaldimine ligands in microbial and cancer cells. Future Medicinal Chemistry. Newlands Press Ltd, 2023, vol. 15, No 15, p. 1415-1426. ISSN 1756-8919. Available from: https://dx.doi.org/10.4155/fmc-2023-0190.

BUŠA, Daniel, Martin ČULEN, Tomáš LOJA, Ivana JEŽÍŠKOVÁ, Adam FOLTA and Jiří MAYER. Inhibition of acute myeloid leukemia using palbociclib and ponatinib in a patient-derived xenograft model. In Actual Problems of Medical Prevention, Baku, Azerbajdžán. 2023.

TREBICHALSKÁ, Zuzana, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In-situ cryo-electron tomography of Enterovirus replication. In In situ structural biology: from cryo-EM to multi-scale modelling. 2023.

NOVÁČEK, Jiří and Barbora TRUKSOVÁ. Instruct-ERIC Best Practices in CryoEM Workshop. 2023.

BERA, Krishnendu and Jozef HRITZ. Interaction of selected drugs at dimer interface of human 14-3-3ζ protein. In 6th Advanced in Silico Drug Design workshop/challenge, 30st January – 3rd February 2023, Faculty of Science, Palacky University, Olomouc, Czech Republic. 2023.

DAS, Amiyaranjan, Julia BARTULI, Clemens GRIMM, Utz FISCHER and Gabriel DEMO. INTERPLAY BETWEEN VIRAL TRANSCRIPTION AND HOST TRANSLATION. In NIVB meeting 2023. 2023. ISSN 2336-7210.

SVOBODA, Tomáš, Radka SVOBODOVÁ, David ANTOŠ, Adrián ROŠINEC and Aleš KŘENEK. Introduction to Onedata at CEITEC MU and in Czech National Repository Platform. In MATECHat meeting. 2023.

BUČEKOVÁ, Gabriela, Viktoriia DOSHCHENKO, Vladimír HORSKÝ and Radka SVOBODOVÁ. Invesigating the rare conformation of small rings in ligands. In XXII. Meeting of Biochemists and Molecular Biologists. 2023.

RODRIGUEZ-GALAN, Ana, Sara G DOSIL, Anna VLČKOVÁ, Lola FERNANDEZ-MESSINA, Zuzana FEKETOVÁ, Julie POKORNÁ, Irene FERNANDEZ-DELGADO, Emilio CAMAFEITA, Manuel Jose GOMEZ, Marta RAMIREZ-HUESCA, Cristina GUTIERREZ-VAZQUEZ, Fatima SANCHEZ-CABO, Jesus VAZQUEZ, Štěpánka VAŇÁČOVÁ and Francisco SANCHEZ-MADRID. ISG20L2: an RNA nuclease regulating T cell activation. Cellular and molecular life sciences. BASEL: BIRKHAUSER VERLAG AG, 2023, vol. 80, No 9, p. 1-19. ISSN 1420-682X. Available from: https://dx.doi.org/10.1007/s00018-023-04925-2.

PORUBSKÁ, Jana, Veronika HORSKÁ, Vladimír HORSKÝ and Radka SVOBODOVÁ. Journal metrics and structures: A dynamic interplay. In XXII. Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

ZAFAR, Hassan and Gabriel DEMO. Liquid-liquid phase separation of a bacterial translation factor. In XXVIIth Biochemistry congress of Czech Society for Biochemistry and Molecular Biology. 2023. ISBN 978-80-8240-047-5.

RAČEK, Tomáš, Tomáš SVOBODA and Radka SVOBODOVÁ. Management of life-science data and their metadata. In XXII. setkání biochemiků a molekulárních biologů. 2023.

KHODAM HAZRATI, Mehrnoosh and Robert VÁCHA. Membrane adsorption enhances translocation of antimicrobial peptide buforin 2. In EBSA Congress 2023. 2023.

HOUSER, Josef and Kristýna HROMÁDKOVÁ. Methods for Characterization of Biomolecular Interactions. 2023.

VONDRASEK, David, Daniel HADRABA, Jan PŘIBYL, Adam ECKHARDT, Martin OSTADAL, Frantisek LOPOT, Karel JELEN, Martina DOUBKOVA, Jarmila KNITLOVA, Tomas NOVOTNY and Jiri JANACEK. Microstructural Analysis of Collagenous Structures in Relapsed Clubfoot Tissue. Microscopy and Microanalysis. Saarbrücken: Cambridge University Press, 2023, vol. 29, No 1, p. 265-272. ISSN 1431-9276. Available from: https://dx.doi.org/10.1093/micmic/ozac012.

PLEVKA, Pavel, Barbora TRUKSOVÁ and Kristýna HOŘAVOVÁ. Mjuni exkurze (Mjuni guided tour). 2023.

BIRIUKOV, Denys, Riopedre Fernández MIGUEL and Martinez-Seara HECTOR. Model Sugars Right: Improved Interactions of Glycans in All-Atom Molecular Dynamics Simulations. In GGMM 2023 – Young Modellers Conference. 2023.

CHARESHNEU, Aliaksei, Adam MIDLIK, Crina-Maria IONESCU, Alexander ROSE, Vladimír HORSKÝ, Alessio CANTARA, Radka SVOBODOVÁ, Karel BERKA and David SEHNAL. Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations. Nucleic Acids Research. Oxford University Press, 2023, vol. 51, W1, p. "W326"-"W330", 5 pp. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad411.

TĚŠINA, Petr. Molecular basis of eIF5A-dependent CAT tailing in eukaryotic ribosome-associated quality control. In Protein synthesis and translational control. 2023.

BERA, Krishnendu, Isabelle LANDRIEU, Lasorsa ALESSIA and Jozef HRITZ. Molecular dynamic simulation study of multiple phosphorylations at the proline rich region of tau(210-240) peptide. In ALESSIA, Lasorsa and Jozef HRITZ. Prague Protein Spring 2023, Prague, 4-7 May 2023. 2023. ISBN 978-80-86241-70-8.

CHMELOVÁ, Klaudia, Tadeja GAO, Martin POLÁK, Andrea SMITH, Tristan I. CROLL, Tanvir SHAIKH, Jana ŠKAŘUPOVÁ, Radka CHALOUPKOVÁ, Kay DIEDERICHS, Randy J. READ, Jiří DAMBORSKÝ, Jiří NOVÁČEK and Martin MAREK. Multimeric structure of a subfamily III haloalkane dehalogenase-like enzyme solved by combination of cryo-EM and x-ray crystallography. Protein Science. Hoboken: Wiley, 2023, vol. 32, No 10, p. 1-22. ISSN 0961-8368. Available from: https://dx.doi.org/10.1002/pro.4751.

BIRIUKOV, Denys, Timothée Emmanuel J. RIVEL and Robert VÁCHA. Multiple factors modulating the formation of toroidal membrane pores. In NIVB MEETING 2023. 2023. ISSN 2336-7202.

KOUTNA, Eliska, Vanda LUX, Tomas KOUBA, Jana SKERLOVA, Jiří NOVÁČEK, Pavel SRB, Rozalie HEXNEROVA, Hana SVACHOVA, Zdenek KUKACKA, Petr NOVAK, Milan FABRY, Simon POEPSEL and Vaclav VEVERKA. Multivalency of nucleosome recognition by LEDGF. Nucleic acids research. Oxford: Oxford University Press, 2023, vol. 51, No 18, p. 10011-10025. ISSN 0305-1048. Available from: https://dx.doi.org/10.1093/nar/gkad674.

CÍGLER, Petr, Lukáš BÁLEK, Jan HAVLÍK, Pavel KREJČÍ, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. Nanodiamonds as artificial proteins for regulation of a cell signalling system. 2023.

CÍGLER, Petr, Lukáš BÁLEK, Jan HAVLÍK, Pavel KREJČÍ, Lukáš TRANTÍREK and Silvie TRANTÍRKOVÁ. Nanodiamonds as artificial proteins for regulation of a cell signalling system. 2023.

PŘIBYL, Jan and Barbora TRUKSOVÁ. Nanosurf DriveAFM Workshop. 2023.

CHYBA, Jan, Anna HRUZÍKOVÁ, Michal KNOR, Petra PIKULOVÁ, Kateřina MARKOVÁ, Jan NOVOTNÝ and Radek MAREK. Nature of NMR Shifts in Paramagnetic Octahedral Ru(III) Complexes with Axial Pyridine-Based Ligands. Inorganic Chemistry. American Chemical Society, 2023, vol. 62, No 8, p. 3381-3394. ISSN 0020-1669. Available from: https://dx.doi.org/10.1021/acs.inorgchem.2c03282.

BYTESNIKOVA, Zuzana, Martina KOLACKOVA, Marketa DOBESOVA, Pavel SVEC, Andrea RIDOSKOVA, Jana PEKARKOVA, Jan PŘIBYL, Petr CAPAL, Dalibor HUSKA, Vojtech ADAM and Lukas RICHTERA. New insight into the biocompatibility/toxicity of graphene oxides and their reduced forms on Chlamydomonas reinhardtii. NANOIMPACT. NETHERLANDS: ELSEVIER, 2023, vol. 31, July, p. 1-12. ISSN 2452-0748. Available from: https://dx.doi.org/10.1016/j.impact.2023.100468.

SVOBODOVÁ, Radka, Karel BERKA, Ivana HUTAŘOVÁ VAŘEKOVÁ, Tomáš RAČEK and Ondřej SCHINDLER. New ways of protein family visualization in AlphaFold era. In 3D-BioInfo | ICSB 3D-SIG | ELIXIR Czech Republic Community Meeting in Structural Bioinformatics. 2023.

RIEVAJOVÁ, Martina, Kateryna KOTSARENKO, Lenka MALINOVSKÁ, Ján ŠTĚRBA and Michaela WIMMEROVÁ. Novel C-type lectin from Ixodes ricinus: a three-domain mystery. In XXII. setkání biochemiků a molekulárních biologů. 2023. ISBN 978-80-280-0409-5.

HOUSER, Josef and Barbora TRUKSOVÁ. Novel Drug Discovery & Delivery systems: Malvern Panalytical Biophysical Characterisation Seminar. 2023.

PROCHÁZKOVÁ, Markéta, Eliška KUCHOVSKÁ, Michael KILLINGER and Karel KLEPÁRNÍK. Novel Förster Resonance Energy Transfer probe with quantum dot for a long-time imaging of active caspases inside individual cells. Analytica Chimica Acta. Elsevier B.V., 2023, vol. 1267, August, p. 1-9. ISSN 0003-2670. Available from: https://dx.doi.org/10.1016/j.aca.2023.341334.

BURÁŇOVÁ, Tereza, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Novel two-domain lectin from bacterium Photorhabdus laumondii. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-047-5.

ROŠINEC, Adrián, Tomáš SVOBODA, Tomáš RAČEK, Josef HANDL, Jozef SABO, Aleš KŘENEK and Radka SVOBODOVÁ. Onedata4Sci: Life-science experimental datasets management system. In 3D-BioInfo | ISCB 3D-SIG | ELIXIR Czech Republic Structural Bioinformatics. 2023.

KUČINSKAS, Gytis, Hana NEDOZRÁLOVÁ and Tomi GREŇA. Pathological tau protein fibrils – structure and cellular context. In The XIX Discussions in Structural Molecular Biology and the 6th User meeting of CIISB. 2023.

JAHN, Helene, Ladislav BARTOŠ, Grace I. DEARDEN, Jeremy S. DITTMAN, Joost C. M HOLTHUIS, Robert VÁCHA and Anant K. MENON. Phospholipids are imported into mitochondria by VDAC, a dimeric beta barrel scramblase. Nature Communications. Heidelberger: Nature Research, 2023, vol. 14, No 1, p. 1-16. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-43570-y.

LIRUSSI, Frederic, Kyrylo PYRSHEV, Semen YESYLEVSKYY, Timothée Emmanuel Jonathan RIVEL, Tatiana LOPEZ, Eleonore COPPENS, Simona MURA, Patrick COUVREUR and Christophe RAMSEYER. Plasma membrane lipid bilayer is druggable: Selective delivery of gemcitabine-squalene nano-medicine to cancer cells. Biochimica et Biophysica Acta - Molecular Basis of Disease. Amsterdam: ELSEVIER SCIENCE BV, 2023, vol. 1869, No 2, p. 1-12. ISSN 0925-4439. Available from: https://dx.doi.org/10.1016/j.bbadis.2022.166614.

BURÁŇOVÁ, Tereza, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Production and characterization of two-domain lectins from Photorhabdus spp. In XXII. Setkání biochemiků a molekulárních biologů. 2023. ISBN 978-80-280-0409-5.

ROBOTKOVÁ, Kateřina, Václav PECŮCH, Jan KOMÁREK and Michaela WIMMEROVÁ. Production of lectins for lectin arrays. In XXIInd Meeting of Biochemists and Molecular Biologists. 2023. ISBN 978-80-280-0409-5.

KORSÁK, Marek, Josef HOUSER, Juliette DEVOS, Lukáš GAJDOŠ, Pavel DOBEŠ and Michaela WIMMEROVÁ. Production of recombinant lectin PluLec from Photorhabdus luminescens for neutron crystallography and its structure-functional characterization. In XXVIIth Biochemistry Congress of Slovak and Czech Societies for Biochemistry and Molecular Biology with cooperation of Hungarian and Ukrainian Biochemical Societies. 2023. ISBN 978-80-8240-047-5.

SADZAK, Anja, Zlatko BRKLJACA, Mihael ERAKOVIC, Manfred KRIECHBAUM, Nadica MALTAR-STRMECKI, Jan PŘIBYL and Suzana SEGOTA. Puncturing lipid membranes: onset of pore formation and the role of hydrogen bonding in the presence of flavonoids. JOURNAL OF LIPID RESEARCH. UNITED STATES: ELSEVIER, 2023, vol. 64, No 10, p. 1-14. ISSN 0022-2275. Available from: https://dx.doi.org/10.1016/j.jlr.2023.100430.

PIKULOVÁ, Petra, Debora MISENKOVA, Radek MAREK, Stanislav KOMOROVSKY and Jan NOVOTNÝ. Quadratic Spin–Orbit Mechanism of the Electronic g-Tensor. Journal of Chemical Theory and Computation. American Chemical Society, 2023, vol. 19, No 6, p. 1765-1776. ISSN 1549-9618. Available from: https://dx.doi.org/10.1021/acs.jctc.2c01213.

KULÍŠKOVÁ, Petra, Lucie VAŠÁTKOVÁ and Iva SLANINOVÁ. Quaternary Benzophenanthridine Alkaloids Act as Smac Mimetics and Overcome Resistance to Apoptosis. International Journal of Molecular Sciences. BASEL: MDPI, 2023, vol. 24, No 20, p. 1-16. ISSN 1661-6596. Available from: https://dx.doi.org/10.3390/ijms242015405.

PAPAGEORGIOU, Anna, Michaela POSPÍŠILOVÁ, Jakub CIBULKA, Raghib ASHRAF, Christopher WAUDBY, Pavel KADEŘÁVEK, Volha MAROZ, Karel KUBÍČEK, Zbyněk PROKOP, Lumír KREJČÍ and Konstantinos TRIPSIANES. Recognition and coacervation of G-quadruplexes by a multifunctional disordered region in RECQ4 helicase. Nature Communications. Berlin: Nature, 2023, vol. 14, No 1, p. 1-19. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-023-42503-z.

HASSAN, Ahmed Adel I. H., Kosuke ITO, Toshio UCHIUMI and Gabriel DEMO. Ribosome hibernation in archaea. In XXVIIth Biochemistry congress of Czech Society for Biochemistry and Molecular Biology. 2023. ISBN 978-80-8240-047-5.

HASSAN, Ahmed Adel I. H., Yuko NAKANO, Gregor BLAHA, Ya-Ming HOU and Gabriel DEMO. RimM and RsfS ribosomal factors regulate the translation in bacteria. In XIX Discussions in Structural Molecular Biology. 2023.

LUKAVSKY, Peter, Dalibor BLAŽEK, Vojtěch BYSTRÝ, Anna HELÁNOVÁ and Barbora TRUKSOVÁ. RNA Summer School 2023. 2023.

KLOCEK, Donnamae, Danyil GRYBCHUK, Diego H MACEDO, Arnau GALAN, Jan VOTYPKA, Regula SCHMID-HEMPEL, Paul SCHMID-HEMPEL, Vyacheslav YURCHENKO and Alexei Yu KOSTYGOV. RNA viruses of<i> Crithidia</i><i> bombi,</i> a of bumblebees. Journal of invertebrate pathology. New York: Academic Press, 2023, vol. 201, Nov, p. 1-6. ISSN 0022-2011. Available from: https://dx.doi.org/10.1016/j.jip.2023.107991.

VEVERKA, Radek and Jiří NOVÁČEK. Scientific data integration and management platform. 2023.

SVOJANOVSKÝ, Vilém, Jakub MÁČALA, Ivana MAŠLAŇOVÁ, Zdeněk FARKA, Jiří KROUPA, Viktor KANICKÝ, Pavel HOUŠKA and Jan PREISLER. Single nanoparticle tag detection in immunoassay by LA ICP MS. In 24. Škola hmotnostní spektrometrie. 2023.

ROŠKOVÁ, Ivana, Marek VEČEŘA, Lenka RADOVÁ, Karolína TRACHTOVÁ, František SIEGL, Markéta HERMANOVÁ, Michal HENDRYCH, Leoš KŘEN, Václav VYBÍHAL, Hana VALEKOVÁ, Petra KASPAROVA, Ivana KOLOUŠKOVÁ, Tomáš KAZDA, Ondřej SLABÝ, Radim JANČÁLEK, Jiří ŠÁNA and Martin SMRČKA. Small RNA Sequencing Identifies a Six-MicroRNA Signature Enabling Classification of Brain Metastases According to their Origin. CANCER GENOMICS & PROTEOMICS. ATHENS: INT INST ANTICANCER RESEARCH, 2023, vol. 20, No 1, p. 18-29. ISSN 1109-6535. Available from: https://dx.doi.org/10.21873/cgp.20361.

HENDRYCH, Michal, Peter SOLÁR, Markéta HERMANOVÁ, Ondřej SLABÝ, Hana VALEKOVÁ, Marek VEČEŘA, Alena KOPKOVÁ, Zdeněk MACKERLE, Tomáš KAZDA, Petr POSPÍŠIL, Radek LAKOMÝ, Jan CHRASTINA, Jiří ŠÁNA and Radim JANČÁLEK. Spinal Metastasis in a Patient with Supratentorial Glioblastoma with Primitive Neuronal Component: A Case Report with Clinical and Molecular Evaluation. Diagnostics. Basel: MDPI, 2023, vol. 13, No 2, p. 1-14. ISSN 2075-4418. Available from: https://dx.doi.org/10.3390/diagnostics13020181.

KUNTOVÁ, Lucie, Ivana MAŠLAŇOVÁ, Radka OBOŘILOVÁ, Hana ŠIMEČKOVÁ, Adéla FINSTRLOVÁ, Pavol BÁRDY, Marta ŠIBOROVÁ, Liudmyla TROIANOVSKA, Tibor BOTKA, Petr GINTAR, Ondrej ŠEDO, Zdeněk FARKA, Jiří DOŠKAŘ and Roman PANTŮČEK. Staphylococcus aureus Prophage-Encoded Protein Causes Abortive Infection and Provides Population Immunity against Kayviruses. mBio. Washington, DC, USA: American Society for Microbiology, 2023, vol. 14, No 2, p. 1-15. ISSN 2150-7511. Available from: https://dx.doi.org/10.1128/mbio.02490-22.

VAZDAR, K., C. TEMPRA, A. OLŻYŃSKA, Denys BIRIUKOV, L. CWIKLIK and M. VAZDAR. Stealthy Player in Lipid Experiments? EDTA Binding to Phosphatidylcholine Membranes Probed by Simulations and Monolayer Experiments. Journal of Physical Chemistry B. WASHINGTON: American Chemical Society, 2023, vol. 127, No 24, p. 5462-5469. ISSN 1520-6106. Available from: https://dx.doi.org/10.1021/acs.jpcb.3c03207.

SAH-TELI, Shiv K, Matyáš PINKAS, Mikko J HYNONEN, Sarah J BUTCHER, Rik K WIERENGA, Jiří NOVÁČEK and Rajaram VENKATESAN. Structural basis for different membrane-binding properties of<i> E.</i><i> coli</i> anaerobic and human mitochondrial 8-oxidation trifunctional enzymes. Structure. CAMBRIDGE: CELL PRESS, 2023, vol. 31, No 7, p. 812-832. ISSN 0969-2126. Available from: https://dx.doi.org/10.1016/j.str.2023.04.011.

PATERNOGA, Helge, Caillan CROWE-MCAULIFFE, Lars V BOCK, Timm O KOLLER, Martino MORICI, Bertrand BECKERT, Alexander G MYASNIKOV, Helmut GRUBMUELLER, Jiří NOVÁČEK and Daniel N WILSON. Structural conservation of antibiotic interaction with ribosomes. NATURE STRUCTURAL & MOLECULAR BIOLOGY. NEW YORK: NATURE PUBLISHING GROUP, 2023, vol. 30, No 9, p. 1380-1414. ISSN 1545-9993. Available from: https://dx.doi.org/10.1038/s41594-023-01047-y.

MIKYSKOVÁ, Michaela, Filip MELICHER and Michaela WIMMEROVÁ. Structural characterization of the jacalin-related lectin from the mushroom Calocera viscosa. In XXVIIth Biochemistry congress. 2023. ISBN 978-80-8240-047-5.

HOMOLA, Miroslav, Carina Renate BÜTTNER, Tibor FÜZIK, Pavel KŘEPELKA, Radka HOLBOVÁ, Jiří NOVÁČEK, Marten CHAILLET, Friedrich FÖRSTER and Willie WILSON. STRUCTURE AND REPLICATION CYCLE OF A VIRUS INFECTING CLIMATE-MODULATING ALGA EMILIANIA HUXLEYI. 2023.

RUMNIEKS, Janis, Tibor FÜZIK and Kaspars TARS. Structure of the Borrelia Bacteriophage uBB1 Procapsid. Journal of Molecular Biology. LONDON: ACADEMIC PRESS LTD- ELSEVIER SCIENCE LTD, 2023, vol. 435, No 24, p. 1-18. ISSN 0022-2836. Available from: https://dx.doi.org/10.1016/j.jmb.2023.168323.

BERA, Krishnendu and Thomas Peter FELLMETH. Study of conformational changes of Tau(210-240) upon multiple phosphorylations using molecular dynamics simulations. In ITAT Conference. 2023. ISBN 978-80-8147-132-2.

TUŽINČIN, Dávid, Nicola SALVI, Vojtěch ZAPLETAL, Zuzana JASEŇÁKOVÁ, Milan ZACHRDLA, Petr PADRTA, Subhash NARASIMHAN, Thorsten MARQUARDSEN, Jean-Max TYBURN, Hana ŠANDEROVÁ, Alžběta RABATINOVÁ, Kateřina BENDOVÁ, Libor KRÁSNÝ, Lukáš ŽÍDEK, Martin BLACKLEDGE, Fabien FERRAGE and Pavel KADEŘÁVEK. Study of the Dynamics of Flexible Subunits of RNA Polymerase from Bacillus subtilis. 2023.

PŘIBYL, Jan, Radka OBOŘILOVÁ and Šimon KLIMOVIČ. Summer workshop on BioAFM microscopy 2023. 1st ed. Brno: Masarykova univerzita, 2023. ISBN 978-80-280-0397-5.

PŘIBYL, Jan and Eliška JANÍČKOVÁ. Summer workshop on BioAFM Microscopy 2023. 2023.

KNIGHT, Andrea, Josef HOUSER, Vilém JURÁŇ, Václav VYBÍHAL, Pavel FADRUS, Martin SMRČKA and Martin PISKÁČEK. Targeting undruggable oncoproteins c-Myc and N-Myc by the 9aaTADs. In Advanced Therapies 2023, 14-15 March 2023, ExCeL, London. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Differential scanning fluorimetry demo. 2023.

HOUSER, Josef and Eliška JANÍČKOVÁ. TechWatch series: Mass photometry workshop: Demonstration of instrument for molecular size analysis. 2023.

ZÁVODNÍK, Michal, Petr FAJKUS, Michal FRANEK, David KOPECKÝ, Sonia GARCIA, Steven DODSWORTH, Andres OREJUELA, Agata Magdalena KILAR, Jiri PTACEK, Martin MÁTL, Anna HÝSKOVÁ, Jiří FAJKUS and Vratislav PEŠKA. Telomerase RNA gene paralogs in plants - the usual pathway to unusual telomeres. New Phytologist. HOBOKEN: Blackwell Science, 2023, vol. 239, No 6, p. 2353-2366. ISSN 0028-646X. Available from: https://dx.doi.org/10.1111/nph.19110.

HOUSER, Josef, Kristína JENDRUCHOVÁ, Andrea KNIGHT and Martin PISKÁČEK. The NFkB activation domain is 14-amino-acid-long variant of the 9aaTAD. The Biochemical journal. LONDON: PORTLAND PRESS LTD, 2023, vol. 480, No 5, p. 297-306. ISSN 0264-6021. Available from: https://dx.doi.org/10.1042/BCJ20220605.

LONG, Qilin, Marek ŠEBESTA, Kateřina ŠEDOVÁ, Vojtěch HALUZA, Adele ALAGIA, Zhichao LIU, Richard ŠTEFL and Monika GULLEROVA. The phosphorylated trimeric SOSS1 complex and RNA polymerase II trigger liquid-liquid phase separation at double-strand breaks. Cell Reports. Elsevier, 2023, vol. 42, No 12, p. 1-25. ISSN 2211-1247. Available from: https://dx.doi.org/10.1016/j.celrep.2023.113489.

MIKULOVÁ, Antónia, Pavlína JANOVSKÁ, Jan VERNER, Hana PLEŠINGEROVÁ, Olga VONDÁLOVÁ BLANÁŘOVÁ, Pavlína KEBKOVÁ, Kateřina SOTOLÁŘOVÁ, Jana BARTOŠÍKOVÁ, M. CHORVÁTOVÁ, Terézia KURUCOVÁ, Tomáš LOJA, Boris TICHÝ, Lukáš KUBALA and Vítězslav BRYJA. The role of casein kinase 1 inhibition in treatment of chronic lymphocytic leukemia. In 12th International Conference Analytical Cytometry, Praha. 2023.

FARIA ZENI, Pedro, Michaela MEDKOVÁ, K. TRACHTOVÁ, L. JANSKÁ, Václav ŠEDA, Eva HOFERKOVÁ, Nandan Mysore VARADARAJAN, Sonali SHARMA, Aleš OBRDLÍK, Štěpánka VAŇÁČOVÁ, A. MAIQUES-DIAZ, JI. MARTÍN-SUBERO and Marek MRÁZ. The role of long non-coding RNAs in BCR-mediated CLL activation. In CEITEC PhD Conference, Brno. 2023.

HASSAN, Ahmed Adel Ibrahim Hassona, Christian IHLING, Claudio IACOBUCCI, Panagiotis L KASTRITIS, Andrea SINZ and Tobias KRUSE. The structural principles underlying molybdenum insertase complex assembly. Protein Science. MALDEN: WILEY-BLACKWELL, 2023, vol. 32, No 9, p. 1-13. ISSN 0961-8368. Available from: https://dx.doi.org/10.1002/pro.4753.

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NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. Describing 14-3-3 dimerization: tools to obtain KD. In XXII. Workshop of Biophysical Chemists and Electrochemists. 2022. ISBN 978-80-280-0087-5.

FUJDIAROVÁ, Eva, Josef HOUSER, Filip MELICHER, Lukáš FALTINEK and Michaela WIMMEROVÁ. Detailed analysis of binding sites in the PLL family. 2022.

SKLENÁROVÁ, Dorota, Ekaterina MAKHNEVA, Julian BRANDMEIER, Hans-Heiner GORRIS and Zdeněk FARKA. Detection of cancer biomarkers using immunoassays with upconversion nanoparticles and magnetic preconcentration. In 21. Interdisciplinary meeting of young life scientists. 2022. ISSN 2336-7202.

PEŠL, Martin, Roberto PIVATO, Šimon KLIMOVIČ, Daniil KABANOV, Filip SVĚRÁK, Jan PŘIBYL, Zdeněk STÁREK and Vladimír ROTREKL. Detekce arytmie u dvojice klastrů kardiomyocytů s pomocí mikroskopie atomárních sil. In XIX. Slovenské a české sympózium o arytmiách a kardiostimulácii. 2022.

MACHÁČOVÁ, Eliška and Zdeněk FARKA. Detekce proteinových biomarkerů pomocí lateral flow testů s foton-upkonverzními nanočásticemi (Detection of protein biomarkers using lateral flow tests with photon-upconversion nanoparticles). Online. In J. Barek, V. Vyskočil. Czech Chem. Soc. Symp. Ser. 20, 335–339 (2022). Praha: Czech Chemical Society Symposium Series, 2022, p. 335-339. ISSN 2336-7202. Available from: https://dx.doi.org/10.54779/ccsss20220335.

MAŠLAŇOVÁ, Ivana, Lucie KUNTOVÁ, Radka OBOŘILOVÁ, Vilém SVOJANOVSKÝ, Zdeněk FARKA, Jan PREISLER and Roman PANTŮČEK. Development of direct detection methods for monitoring of therapeutic staphylococcal bacteriophages in clinical samples. In NIVB Meeting 2022. 2022. ISSN 2336-7210.

KOMÁREK, Jan, Marek KORSÁK, Lukáš FALTINEK and Michaela WIMMEROVÁ. Development of lectin arrays for mapping the glycosylation changes in proteins and cells. In XXIst Meeting of Biochemists and Molecular Biologists. 2022. ISBN 978-80-280-0136-0.

EBRAHIMI, Mehrnaz, Parviz NOROUZI, Fatemeh DAVAMI, Alireza BONAKDAR, Mahya ASGHARIAN MARZABAD and Omid TABAEI. Direct detection of TNF-alpha by copper benzene tricarboxylate MOFs/gold nanoparticles modified electrochemical label-free immunosensor using FFT admittance voltammetry. Journal of Electroanalytical Chemistry. Lausanne: Elsevier, 2022, vol. 925, NOV, p. 116897-116908. ISSN 1572-6657. Available from: https://dx.doi.org/10.1016/j.jelechem.2022.116897.

ROTREKL, Vladimír, Martin PEŠL, Roberto PIVATO, Filip SVĚRÁK, Daniil KABANOV, Šimon KLIMOVIČ, Zdeněk STÁREK and Jan PŘIBYL. DUAL CARDIOMYOCYTE CLUSTER ARRHYTHMIAS DETECTED BY ATOMIC FORCE MICROSCOPY. In Czech Cardiovascular Research and Innovation Days 2022. 2022.

PEŠL, Martin, Roberto PIVATO, Šimon KLIMOVIČ, Daniil KABANOV, Filip SVĚRÁK, Jan PŘIBYL and Vladimír ROTREKL. Dual cardiomyocyte cluster detection the different types of arrhythmogenic potential of caffein. In AFM BioMed Conference 2022. 2022.

ŠÍSTKOVÁ, Jana, Kateřina VRCHOVECKÁ, Jan KUTA, Martin UHER, Jan PŘIBYL and Monika PÁVKOVÁ GOLDBERGOVÁ. Effect of titanium surface nanotubular arrays with nanotubes of two different dimensions on cell behavior. In 7th European Congress on Advanced Nanotechnology and Nanomaterials. 2022.

ŠČUREK, Martin, Šimon KLIMOVIČ, Martin PEŠL, Jan PŘIBYL, Daniil KABANOV, Deborah BECKEROVÁ, Markéta BÉBAROVÁ, Vladimír ROTREKL and Kristián BRAT. Effects of salbutamol and ipratropium on human stem-cells derived cardiomyocytes’ function. In ERS International Congress 2022. 2022. ISSN 0903-1936. Available from: https://dx.doi.org/10.1183/13993003.congress-2022.560.

TRNKOVÁ, Libuše, Iveta TŘÍSKOVÁ and Zdeněk FARKA. Electrochemical Analysis of Insulin on Graphite Electrodes. In Navrátil, Tomáš; Fojta, Miroslav; Schwarzová. 41. Moderní elektrochemické metody : Sborník přednášek. Ústí nad Labem: Best Servis, 2022, p. 200-203. ISBN 978-80-905221-9-0.

KAISER, Jozef, Karolína VYTISKOVÁ, Karel NOVOTNÝ, Zdeněk FARKA, Petr SKLÁDAL and Pavel POŘÍZKA. Enhancing the sensitivity of laser-induced breakdown spectroscopy for the detection of nanoparticle-labeled cancerous tissues. In European Symposium on Analytical Spectrometry (ESAS) 2022. 2022. ISBN 978-80-88195-41-2.

DEMO, Gabriel, Anna LOVELAND, Christine CARBONE, Egor SVIDRITSKIY and Andrei KOROSTELEV. Ensemble and time-resolved cryo-EM in transcription and translation. In XXI. setkani biochemiku a molekularnich biologu. 2022. ISBN 978-80-280-0136-0.

TREBICHALSKÁ, Zuzana, Aygul ISHEMGULOVA, Liya MUKHAMEDOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. Enteroviruses reach cytoplasm by endosome disruption. In 5th Austrian Cryo-EM Symposium. 2022.

TREBICHALSKÁ, Zuzana, Aygul ISHEMGULOVA, Liya MUKHAMEDOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. Enteroviruses reach cytoplasm by endosome disruption. In EUROPIC 2022. 2022.

LORIN, Valerie, Ignacio FERNANDEZ, Guillemette MASSE-RANSON, Melanie BOUVIN-PLEY, Luis M MOLINOS-ALBERT, Cyril PLANCHAIS, Thierry HIEU, Gerard PEHAU-ARNAUDET, Dominik HREBÍK, Giulia GIRELLI-ZUBANI, Oriane FIQUET, Florence GUIVEL-BENHASSINE, Rogier W SANDERS, Bruce D WALKER, Olivier SCHWARTZ, Johannes F SCHEID, Jordan D DIMITROV, Pavel PLEVKA, Martine BRAIBANT, Michael S SEAMAN, Francois BONTEMS, James p DI SANTO, Felix A REY and Hugo MOUQUET. Epitope convergence of broadly HIV-1 neutralizing IgA and IgG antibody lineages in a viremic controller. JOURNAL OF EXPERIMENTAL MEDICINE. UNITED STATES: ROCKEFELLER UNIV PRESS, 2022, vol. 219, No 3, p. 1-21. ISSN 0022-1007. Available from: https://dx.doi.org/10.1084/jem.20212045.

PŘIBYL, Jan. Exkurze studentů Biskupského gymnázia (Excursion of students of the Bishop's Gymnasium). 2022.

PŘIBYL, Jan. Exkurze studentů Gymnázia Brno-Řečkovice (Excursion of students of the Gymnasium Brno-Rečkovice). 2022.

KOSINOVÁ, Martina, Petr ŠTOURAČ, Tereza PROKOPOVÁ, Tereza VAFKOVÁ, Václav VAFEK, Daniel BARVÍK, Tamara SKŘÍŠOVSKÁ, Jan DVOŘÁČEK, Jana DJAKOW, Jozef KLUČKA, Jiří JARKOVSKÝ and Pavel PLEVKA. Feasibility of Mouth-to-Mouth Ventilation through FFP2 Respirator in BLS Training during COVID-19 Pandemic (MOVERESP Study): Simulation-Based Study. Children-Basel. BASEL, SWITZERLAND: MDPI, 2022, vol. 9, No 11, p. 1-7. ISSN 2227-9067. Available from: https://dx.doi.org/10.3390/children9111751.

ZLÍNSKÁ, Vladimíra, Vaclav MATOUSEK, Lukáš TRANTÍREK and Riccardo RIGO. Fluorine Labeling as a Versatile Tool for Probing Nucleic Acid Folding and Interactions by NMR Spectroscopy. ALDRICHIMICA ACTA. UNITED STATES: ALDRICH CHEMICAL CO INC, 2022, vol. 55, No 2, p. 45-52. ISSN 0002-5100.

JAROUR, Ester, Karel ŘÍHA and Pavel PLEVKA. Fokus Václava Moravce – Věda jako spása (The focus of Václav Moravec - Science as salvation). 2022.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. From nano- to milimolar: dimerization dissociation constant determination. In Chemistry towards Biology (CTB10). 2022. ISBN 978-80-971665-3-3.

LEVIEN, Monique, Zdeněk FARKA, Matěj PASTUCHA, Petr SKLÁDAL, Zahra NASRI, Klaus-Dieter WELTMANN and Katja FRICKE. Functional plasma-polymerized hydrogel coatings for electrochemical biosensing. Applied Surface Science. Elsevier, 2022, vol. 584, May, p. 1-8. ISSN 0169-4332. Available from: https://dx.doi.org/10.1016/j.apsusc.2022.152511.

VYMETAL, Jiri, Katerina MERTOVA, Kristyna BOUSOVA, Josef SULC, Konstantinos TRIPSIANES and Jiri VONDRASEK. Fusion of two unrelated protein domains in a chimera protein and its 3D prediction: Justification of the x-ray reference structures as a prediction benchmark. Proteins: Structure, Function, and Bioinformatics. 2022, vol. 90, No 12, p. 2067-2079. ISSN 0887-3585. Available from: https://dx.doi.org/10.1002/prot.26398.

ŠEDA, Václav, Eva VOJÁČKOVÁ, Laura ONDRIŠOVÁ, Lenka KOŠŤÁLOVÁ, Tomáš LOJA, Jan VERNER, Šárka POSPÍŠILOVÁ, Yvona BRYCHTOVÁ, Anna PANOVSKÁ, S. ZHANG, Michael DOUBEK, Jiří MAYER and Marek MRÁZ. GAB1 as novel therapeutic target in B lymphoid and myeloid malignancies. In XXXIV. Olomoucké hematologické dny in Transfuze a hematologie dnes. 2022.

PŘIBYL, Jan. Hands-on-Session: Bruker MultiMode 8HR. 2022.

PIVATO, Roberto, Šimon KLIMOVIČ, Daniil KABANOV, Filip SVĚRÁK, Martin PEŠL, Jan PŘIBYL and Vladimír ROTREKL. hESC derived cardiomyocyte biosensor to detect the different types of arrhythmogenic properties of drugs. Analytica Chimica Acta. AMSTERDAM: ELSEVIER, 2022, vol. 1216, July 2022, p. 1-10. ISSN 0003-2670. Available from: https://dx.doi.org/10.1016/j.aca.2022.339959.

CAVALLIN, Ivana, Marek BARTOŠOVIČ, Tomáš SKALICKÝ, Praveenkumar RENGARAJ, Martin DEMKO, Martina Christina SCHMIDT-DENGLER, Aleksej DRINO, Mark HELM and Štěpánka VAŇÁČOVÁ. HITS-CLIP analysis of human ALKBH8 reveals interactions with fully processed substrate tRNAs and with specific noncoding RNAs. RNA. Cold Spring Harbor: Cold Spring Harbor Laboratory Press, 2022, vol. 28, No 12, p. 1568-1581. ISSN 1355-8382. Available from: https://dx.doi.org/10.1261/rna.079421.122.

SIMONOVA, Anna, Veronika ROMANSKA, Barbora BENONI, Karel ŠKUBNÍK, Lenka ŠMERDOVÁ, Michaela PROCHÁZKOVÁ, Kristina SPUSTOVA, Ondrej MORAVCIK, Lenka GAHUROVA, Jan PACES, Pavel PLEVKA and Hana CAHOVA. Honeybee Iflaviruses Pack Specific tRNA Fragments from Host Cells in Their Virions. Chembiochem. WEINHEIM: WILEY-VCH, 2022, vol. 23, No 17, p. 202200281-202200289. ISSN 1439-4227. Available from: https://dx.doi.org/10.1002/cbic.202200281.

SUKENÍK, Lukáš, Rahul DEB and Robert VÁCHA. HOW LARGE MOLECULES CAN ENTER CELL. In Czech Chemical Society Symposium Series - Annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2022. ISSN 2336-7202.

RUSKAMO, Salla, Arne RAASAKKA, Jan Skov PEDERSEN, Anne MARTEL, Karel ŠKUBNÍK, Tamim DARWISH, Lionel PORCAR and Petri KURSULA. Human myelin proteolipid protein structure and lipid bilayer stacking. Cellular and molecular life sciences. BASEL: SPRINGER BASEL AG, 2022, vol. 79, No 8, p. 419-437. ISSN 1420-682X. Available from: https://dx.doi.org/10.1007/s00018-022-04428-6.

VALENTOVÁ, Lucie, Tibor FÜZIK and Pavel PLEVKA. Hunting Strategy and Virion structure of Bacteriophage JBD30 Revealed by Cryo-electron Microscopy. In CEITEC PhD Conference 2022. 2022.

PIKULOVÁ, Petra, Pia Yasmine JURČEK, Jan CHYBA, Michal KNOR, Anna HRUZÍKOVÁ, Jan NOVOTNÝ and Radek MAREK. Hyperfine chemical shift in host-guest systems of Ru(III) with macrocycles. In EUROMAR 2022. 2022.

RIEVAJOVÁ, Martina, Lenka MALINOVSKÁ, Hana BEREZŇÁKOVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Characterization of a novel lectin from pathogenic fungus Microsporum canis. In 29. kongres Československé společnosti mikrobiologické s mezinárodní účastí. 2022. ISBN 978-80-88379-18-8.

ASAI, Seiya, Jana MORAVCOVA, Lenka ZAKOVA, Irena SELICHAROVA, Romana HADRAVOVA, Andrzej Marek BRZOZOWSKI, Jiří NOVÁČEK and Jiri JIRACEK. Characterization of insulin crystalline form in isolated beta-cell secretory granules. Open Biology. 2022, vol. 12, No 12, p. 220322-220331. ISSN 2046-2441. Available from: https://dx.doi.org/10.1098/rsob.220322.

SKLENÁROVÁ, Dorota, Ekaterina MAKHNEVA, Julian BRANDMEIER, Hans-Heiner GORRIS and Zdeněk FARKA. Immunomagnetic Assay Using Upconversion Nanoparticles for the Detection of Prostate-Specific Antigen. In NANOCON 2022. 2022. ISBN 978-80-88365-07-5.

SUBADINI, Suchismita, Ram Sankar PANIGRAHY, Nishesh Kumar GUPTA, Krishnendu BERA and Harekrushna SAHOO. Impact of Chromate and Dichromate on Lysozyme Stability: A Spectroscopic and Molecular Docking Investigation. Luminescence. Wiley, 2022, vol. 37, No 6, p. 876-882. ISSN 1522-7235. Available from: https://dx.doi.org/10.1002/bio.4231.

BERA, Krishnendu and Jozef HRITZ. Impact of Phosphorylation for Tau210-240 Peptide and Interaction of Small Molecules and 14-3-3ζ Protein Studies Using Computational Methods. In CEITEC PhD Conference. 2022.

TREBICHALSKÁ, Zuzana, Liya MUKHAMEDOVA, Aygul ISHEMGULOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In situ cryo-electron tomography of enterovirus cell entry. In 16th Multinational Congress on Microscopy. 2022. ISBN 978-80-11-02253-2.

TREBICHALSKÁ, Zuzana, Liya MUKHAMEDOVA, Aygul ISHEMGULOVA, Lenka ŠMERDOVÁ, Tibor FÜZIK, Jiří NOVÁČEK and Pavel PLEVKA. In situ cryo-electron tomography of enterovirus cell entry. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology). 2022. ISSN 1805-4382.

MAKHNEVA, Ekaterina, Dorota SKLENÁROVÁ, Julian BRANDMEIER, Antonín HLAVÁČEK, Hans-Heiner GORRIS, Petr SKLÁDAL and Zdeněk FARKA. Influence of Label and Solid Support on the Performance of Heterogeneous Immunoassays. Analytical Chemistry. Washington, DC: American Chemical Society, 2022, vol. 94, No 47, p. 16376-16383. ISSN 0003-2700. Available from: https://dx.doi.org/10.1021/acs.analchem.2c03543.

PŘIBYL, Jan. Instruct Council Meeting. 2022.

PLUCAROVÁ, Jitka, Séverine JANSEN, Alice LANÍKOVÁ and Lukáš ŽÍDEK. Interactions of adaptor protein Grb2 with microtubule associated protein 2c. In XVIII Discussions in Structural Molecular Biology. 2022.

HRADIL, Ondřej, Václav TESAŘ and Zuzana VÉMOLOVÁ. International Conference on Research Infrastructures 2022. Proceedings Report. 1., elektronické vyd. Brno: Masarykova univerzita, 2022. ISBN 978-80-280-0148-3.

PLACHÁ, Kateřina, Tereza ŠOPÍKOVÁ, Martin BENEŠÍK, Tibor BOTKA, Marie KOMÁRKOVÁ, Vlastimil CHROMEČKA, Marta ŠIBOROVÁ, Andrea POLANSKÁ, Kateřina VÍTKOVÁ, Jana JURČÍKOVÁ and Marek MOŠA. Isolation and characterization of new bacteriophages against clinical isolates Klebsiella pneumoniae and Acinetobacter baumanii from University hospital Ostrava. In Viruses of Microbes 2022, Guimarães, Portugal, 2022. 2022.

LACINA, Karel. Kapesní analyzátor pro stanovení protilátek v kapalném vzorku (Pocket analyzer for the determination of antibodies in liquid sample). 2022.

KITTOVÁ, Patrícia, Sandra THALEROVÁ, Andrea VÍTEČKOVÁ WÜNSCHOVÁ, Lucie VAŠÁTKOVÁ, Michaela PEŠKOVÁ, Ondřej VOLNÝ, Anna MAC GILLAVRY DANYLEVSKA, Jan VÍTEČEK, Lukáš KUBALA and Robert MIKULÍK. Kolaterálna cirkulácia zlepšuje rekanalizáciu pôsobením alteplázy: in vitro štúdia (Collateral circulation accelerates recanalization using alteplase: an in vitro study). In 66. Studentská vědecká konference LF MU. 2022. ISBN 978-80-280-0163-6.

NOVÁČEK, Jiří. Kontroler teploty TEM mřížky (TEM grid temperature controller). 2022.

KAISER, Jozef, Karolína VYTISKOVÁ, Karel NOVOTNÝ, Zdeněk FARKA, Petr SKLÁDAL and Pavel POŘÍZKA. Laser-Induced Breakdown Spectroscopy for indirect detection of breast cancer cells through characteristic nanoparticle labeling. In LIBS2022. 2022.

MACHÁČOVÁ, Eliška, Julian BRANDMEIER, Hans-Heiner GORRIS, Petr SKLÁDAL and Zdeněk FARKA. Lateral flow immunoassay based on photon-upconversion nanoparticles for the detection of protein biomarkers. In NANOCON 2022. 2022. ISBN 978-80-88365-07-5.

KABELKA, Ivo, Vasil GEORGIEV, Lisa MARX, Peter PAJTINKA, Karl LOHNER, Georg PABST, Rumiana DIMOVA and Robert VÁCHA. Magainin 2 and PGLa in Bacterial Membrane Mimics III: Membrane Fusion and Disruption. Biophysical Journal. New York, USA: Cell Press, 2022, vol. 121, No 5, p. 852-861. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2021.12.035.

SEMERARO, E.F., Peter PAJTINKA, L. MARX, Ivo KABELKA, R. LEBER, K. LOHNER, Robert VÁCHA and G. PABST. Magainin 2 and PGLa in bacterial membrane mimics IV: Membrane curvature and partitioning. BIOPHYSICAL JOURNAL. UNITED STATES: CELL PRESS, 2022, vol. 121, No 23, p. 4689-4701. ISSN 0006-3495. Available from: https://dx.doi.org/10.1016/j.bpj.2022.10.018.

OJHA, Srikant, Jan PŘIBYL, Šimon KLIMOVIČ, Daniel HADRABA, Marketa JIROUSKOVA and Martin GREGOR. Measurement of Liver Stiffness using Atomic Force Microscopy Coupled with Polarization Microscopy. Journal of Visualized Experiments. JoVE, 2022, vol. 2022, No 185, p. 1-21. ISSN 1940-087X. Available from: https://dx.doi.org/10.3791/63974.

CHOCHOLOVÁ, Eva, Eva DROZDOVÁ, Dana FIALOVÁ, Martin ČERNÝ, Barbora ZWINSOVÁ, Petra VÍDEŇSKÁ, Kristýna BRZOBOHATÁ and Kateřina NOVOTNÁ. Metagenomic research of the ancient human dental calculus as a potential source for the study of rare infectious diseases. In The Biomania Student Scientific Meeting 2022. 2022. ISBN 978-80-280-0040-0.

HOUSER, Josef. Methods for Characterization of Biomolecular Interactions: Classical versus modern. 2022.

HOUSER, Josef, Monika KUBÍČKOVÁ, Eva FUJDIAROVÁ, Jana KOSOUROVÁ, Jan KOMÁREK and Michaela WIMMEROVÁ. Methods for characterization of biomolecules at BIC Core facility, CEITEC MU. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of the Czech Infrastructure for Integrative Structural Biology. 2022. ISSN 1211-5894.

BURIÁNKOVÁ, Iva, Anna MOLÍKOVÁ, Monika VÍTĚZOVÁ, Vladimír ONDERKA, Tomáš VÍTĚZ, Iva URBANOVÁ, Nikola HANIŠÁKOVÁ, Martin ČERNÝ, David NOVÁK, Jan LOCHMAN, Josef ZEMAN, Jakub JAVŮREK, Markéta MACHÁLKOVÁ, Linda DENGLER and Harald HUBER. Microbial Communities in Underground Gas Reservoirs Offer Promising Biotechnological Potential. Fermentation. MDPI, 2022, vol. 8, No 6, p. 1-16. ISSN 2311-5637. Available from: https://dx.doi.org/10.3390/fermentation8060251.

NÁPLAVOVÁ, Alexandra, Aneta KOZELEKOVÁ and Jozef HRITZ. Multiple approaches for protein phosphorylation: a story of 14-3-3. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB. 2022.

GAFFOUR, Amina, Vojtěch ZAPLETAL, Krishnendu BERA and Jana PAVLÍKOVÁ PŘECECHTĚLOVÁ. Multiscale NMR calculations of spin-spin couplings and the phophprylation induced chemical shifts changes in disordered proteins. In International Society of Quantum Biology and Pharmacology (ISQBP). 2022.

PŘIBYL, Jan. NanoBiotech lab_BioAFM and MEA equipment I. 2022.

PŘIBYL, Jan. NanoBiotech lab_BioAFM and MEA equipment II. 2022.

PŘIBYL, Jan. NanoBiotech labs_Core facility presentation I. 2022.

PŘIBYL, Jan. NanoBiotech labs_Core facility presentation II. 2022.

CAMACHO-ZARCO, Aldo R., Vincent SCHNAPKA, Serafima GUSEVA, Anton ABYZOV, Wiktor ADAMSKI, Sigrid MILLES, Malene Ringkjøbing JENSEN, Lukáš ŽÍDEK, Nicola SALVI and Martin BLACKLEDGE. NMR Provides Unique Insight into the Functional Dynamics and Interactions of Intrinsically Disordered Proteins. CHEMICAL REVIEWS. UNITED STATES: AMER CHEMICAL SOC, 2022, vol. 122, No 10, p. 9331-9356. ISSN 0009-2665. Available from: https://dx.doi.org/10.1021/acs.chemrev.1c01023.

FAJTLOVÁ, Šárka, Michal MIKL, Jan PŘIBYL, Pavel PLEVKA, Šárka POSPÍŠILOVÁ and Jiří NOVÁČEK. Noc vědců: Všemi smysly (Researchers' Night 2022 at CEITEC MU). 2022.

HEJRET, Václav, Nandan Mysore VARADARAJAN, Eva KLIMENTOVÁ, Ilektra-Chara GIASSA, Štěpánka VAŇÁČOVÁ and Panagiotis ALEXIOU. Noncanonical small RNA chimeras identified by AGO2-CLASH. In 16th Microsymposium on RNA Biology. 2022.

HOUSER, Josef, Jana KOSOUROVÁ, Monika KUBÍČKOVÁ, Eva PAULENOVÁ and Michaela WIMMEROVÁ. Novel buffer screen for biomolecular characterization. In 1st MOSBRI Scientific Conference. 2022.

BENEŠÍK, Martin, Tomáš BARTEJS, Dominik CHMELÍK, Dana ŠTVERÁKOVÁ, Tibor BOTKA, Marta ŠIBOROVÁ, Vítězslav FUGLÍK, Martina PARISOVÁ and Marek MOŠA. Novel endolysin of S. sciuri phage S10 and its antimicrobial effect on S. aureus. In Viruses of Microbes 2022, Guimarães, Portugal, 2022. 2022.

PŘIBYL, Jan and Jiří NOVÁČEK. Open House Brno 2022: CEITEC MU. 2022.

KELAR TUČEKOVÁ, Zlata, Lukáš VACEK, Michal PAZDERKA, Eliška KOSTRŮNKOVÁ, Lenka SMÍLKOVÁ, Jakub KELAR, Jaromír HAŠANA, Filip RŮŽIČKA and Mirko ČERNÁK. Optimization of plasma-activated media generation for decontamination of thermally sensitive materials. In 9th Central European Symposium on Plasma Chemistry (CESPC-9) joint with COST Action CA19110 Plasma Applications for Smart and Sustainable Agriculture (PlAgri). 2022. ISBN 978-80-8147-115-5.

MIDLIK, Adam, Ivana HUTAŘOVÁ VAŘEKOVÁ, Jan HUTAŘ, Aliaksei CHARESHNEU, Karel BERKA and Radka SVOBODOVÁ. OverProt: secondary structure consensus for protein families. Bioinformatics. Oxford University Press, 2022, vol. 38, No 14, p. 3648-3650. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/btac384.

VARADI, Mihaly, Stephen ANYANGO, Sri Devan APPASAMY, David ARMSTRONG, Marcus BAGE, John BERRISFORD, Preeti CHOUDHARY, Damian BERTONI, Mandar DESHPANDE, Grisell Diaz LEINES, Joseph ELLAWAY, Genevieve EVANS, Romana GÁBOROVÁ, Deepti GUPTA, Aleksandras GUTMANAS, Deborah HARRUS, Gerard J KLEYWEGT, Weslley Morellato BUENO, Nurul NADZIRIN, Sreenath NAIR, Lukas PRAVDA, Marcelo Querino Lima AFONSO, David SEHNAL, Ahsan TANWEER, James TOLCHARD, Charlotte ABRAMS, Roisin DUNLOP and Sameer VELANKAR. PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education. Protein Science. Wiley, 2022, vol. 31, No 10, p. 1-10. ISSN 0961-8368. Available from: https://dx.doi.org/10.1002/pro.4439.

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KOZELEKOVÁ, Aneta, Alexandra NÁPLAVOVÁ, Tomáš BROM, Norbert GAŠPARIK, Jan ŠIMEK, Josef HOUSER and Jozef HRITZ. Phosphorylated and Phosphomimicking Variants May Differ—A Case Study of 14-3-3 Protein. Frontiers in Chemistry. Frontiers Media SA, 2022, vol. 10, March, p. 1-17. ISSN 2296-2646. Available from: https://dx.doi.org/10.3389/fchem.2022.835733.

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HREBÍK, Dominik, Mária GONDOVÁ, Lucie VALENTOVÁ, Tibor FÜZIK, Antonin PRIDAL, Jiří NOVÁČEK and Pavel PLEVKA. Polyelectrolyte coating of cryo-EM grids improves lateral distribution and prevents aggregation of macromolecules. Acta Crystallographica Section D: Structural Biology. Chester: International Union of Crystallography, 2022, vol. 78, NOV, p. 1337-1346. ISSN 2059-7983. Available from: https://dx.doi.org/10.1107/S2059798322009299.

PILIPENCO, Alina, Guruprakash SUBBIAHDOSS, Michala FORINOVÁ, Hana ŠIMEČKOVÁ, Markéta VRABCOVÁ, Nicholas Scott LYNN, Zdeněk FARKA, Erik REIMHULT and Hana VAISOCHEROVÁ-LÍSALOVÁ. Poly(HPMAA-co-CBMAA-co-SBMAA) brush coatings with antifouling properties improve the direct detection of bacterial pathogens in complex food samples. In MeSSAC 2022. 2022.

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RAVASZOVÁ, Karin, Alena HOFROVÁ and Jozef HRITZ. Preparation of catalytic domain of carbonic anhydrase IX with different protein tags. In XXII. Setkání biochemiků a molekulárních biologů. 2022.

ŠTROS, Michal, Eva VOLFOVÁ POLANSKÁ, Tereza HLAVÁČOVÁ and Petr SKLÁDAL. Progress in Assays of HMGB1 Levels in Human Plasma-The Potential Prognostic Value in COVID-19. Biomolecules. Basel: MDPI, 2022, vol. 12, No 4, p. 1-11. ISSN 2218-273X. Available from: https://dx.doi.org/10.3390/biom12040544.

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PANDEY, Deepanjali, Shahid S. NARVI, Ranjeet KUMAR and Jaromír MAREK. Quantitative Intermolecular Interactions Analysis and Magnetic Properties of Thiocyanatoiron(II) Complex with Nicotinamide Ligand. Russian Journal of Inorganic Chemistry. Pleiades Publishing, 2022, vol. 67, No 10, p. 1557-1566. ISSN 0036-0236. Available from: https://dx.doi.org/10.1134/S0036023622100357.

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DUROVIC, Ana, Zorica STOJANOVIC, Zuzana BYTESNIKOVA, Snezana KRAVIC, Pavel SVEC, Jan PŘIBYL and Lukas RICHTERA. Reduced graphene oxide/ZnO nanocomposite modified electrode for the detection of tetracycline. Journal of materials science. NEW YORK: Springer, 2022, vol. 57, No 9, p. 5533-5551. ISSN 0022-2461. Available from: https://dx.doi.org/10.1007/s10853-022-06926-1.

CUYACOT, Ben Joseph Rubiato, Jan NOVOTNÝ, Raphael J. F. BERGER, Stanislav KOMOROVSKY and Radek MAREK. Relativistic Spin–Orbit Electronegativity and the Chemical Bond Between a Heavy Atom and a Light Atom. Chemistry - A European Journal. Wiley-VCH, 2022, vol. 28, No 24, p. "e202200277", 7 pp. ISSN 0947-6539. Available from: https://dx.doi.org/10.1002/chem.202200277.

LOVELAND, Anna B, Egor SVIDRITSKIY, Denis SUSOROV, Soojin LEE, Alexander PARK, Sarah ZVORNICANIN, Gabriel DEMO, Fen-Biao GAO and Andrei A KOROSTELEV. Ribosome inhibition by C9ORF72-ALS/FTD-associated poly-PR and poly-GR proteins revealed by cryo-EM. Nature Communications. London: Nature Publishing Group, 2022, vol. 13, No 1, p. 2776-2788. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-022-30418-0.

POLECHOVA, Jitka, Kory D JOHNSON, Pavel PAYNE, Alex CROZIER, Mathias BEIGLBOECK, Pavel PLEVKA and Eva SCHERNHAMMER. SARS-CoV-2 rapid antigen tests provide benefits for epidemic control - observations from Austrian schools. Journal of clinical epidemiology. New York: Elsevier, 2022, vol. 145, MAY, p. 14-19. ISSN 0895-4356. Available from: https://dx.doi.org/10.1016/j.jclinepi.2022.01.002.

MALINOVSKÁ, Lenka, Kamila ZIMOVÁ, Dominika PONČÁKOVÁ, Vojtěch JUZA and Michaela WIMMEROVÁ. Searching for New Lectins in Mushrooms. 2022. ISBN 978-963-490-460-1.

TUŽINČIN, Dávid, Pavel KADEŘÁVEK, Petr PADRTA and Lukáš ŽÍDEK. Seeing the invisible – Study of transiently formed protein conformation found in domain 1.1 of bacterial transcription factor. In XVIII Discussions in Structural Molecular Biology and 5th User Meeting of CIISB (Czech Infrastructure for Integrative Structural Biology). 2022.

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PAULENOVÁ, Eva, Pavel DOBEŠ, Josef HOUSER, Filip MELICHER, Lukáš FALTINEK, Pavel HYRŠL and Michaela WIMMEROVÁ. Seven-bladed beta-propeller lectins from entomopathogenic bacterium Photorhabdus laumondii. In XXI setkání biochemniků a molekulárních biologů. 2022. ISBN 978-80-280-0136-0.

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PLUCAROVÁ, Jitka, Séverine JANSEN, Subhash NARASIMHAN, Alice LANÍKOVÁ, Marc LEWITZKY, M. Stephan FELLER and Lukáš ŽÍDEK. Specific phosphorylation of microtubule-associated protein 2c by extracellular signal–regulated kinase reduces interactions at its Pro-rich regions. JOURNAL OF BIOLOGICAL CHEMISTRY. UNITED STATES: ELSEVIER, 2022, vol. 298, No 10, p. 102384-102399. ISSN 0021-9258. Available from: https://dx.doi.org/10.1016/j.jbc.2022.102384.

PETERKOVÁ, Kateřina, Ivo DURNÍK, Radek MAREK, Janez PLAVEC and Peter PODBEVŠEK. Structural analysis of pyrene-labelled G-quadruplexes derived from the KIT proto-oncogene. In XIIth International conference, NMR: a tool for biology, Institut Pasteur. 2022.

ZAPLETAL, David, Eliska TABORSKA, Josef PASULKA, Radek MALIK, Karel KUBÍČEK, Martina ZÁNOVÁ, Christian MUCH, Marek ŠEBESTA, Valeria BUCCHERI, Filip HORVAT, Irena JENICKOVA, Michaela PROCHAZKOVA, Jan PROCHAZKA, Matyáš PINKAS, Jiří NOVÁČEK, Diego F JOSEPH, Radislav SEDLACEK, Carrie BERNECKY, Donal CARROLL, Richard ŠTEFL and Petr SVOBODA. Structural and functional basis of mammalian microRNA biogenesis by Dicer. Molecular Cell. CAMBRIDGE: CELL PRESS, 2022, vol. 82, No 21, p. 4064-4079, 30 pp. ISSN 1097-2765. Available from: https://dx.doi.org/10.1016/j.molcel.2022.10.010.

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PLEVKA, Pavel. STRUCTURAL CHARACTERISATION OF VIRUS REPLICATION IN SITU. In Czech Chemical Society Symposium Series - Annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2022. ISSN 2336-7202.

FÜZIK, Tibor, Jana MORAVCOVÁ, Sergei KALYNYCH and Pavel PLEVKA. Structure of Human Enterovirus 70 and Its Inhibition by Capsid-Binding Compounds. Journal of Virology. WASHINGTON: American Society for Microbiology, 2022, vol. 96, No 17, p. 1-13. ISSN 0022-538X. Available from: https://dx.doi.org/10.1128/jvi.00604-22.

KUČINSKAS, Gytis and Jozef HRITZ. Structure of recombinant Tau40 protein fibrils prepared without enhancers of fibrilization. 2022.

GRYBCHUK, Danyil, Michaela PROCHÁZKOVÁ, Tibor FÜZIK, Aleksandras KONOVALOVAS, Saulius SERVA, Vyacheslav YURCHENKO and Pavel PLEVKA. Structures of L-BC virus and its open particle provide insight into Totivirus capsid assembly. Communications Biology. Nature Research, 2022, vol. 5, No 1, p. 847-856. ISSN 2399-3642. Available from: https://dx.doi.org/10.1038/s42003-022-03793-z.

DOBEŠ, Pavel, Eva FUJDIAROVÁ, Josef HOUSER, Pavel HYRŠL and Michaela WIMMEROVÁ. Studying the role of PLLs, the family of lectins produced by Photorhabdus sp., the bacterial symbiont of entomopathogenic nematodes. In 18th meeting IOBC/WPRS Working Group Microbial and Nematode Control of Invertebrate Pests. 2022.

KHIRSARIYA, PrashantKumar, Patrik POSPÍŠIL, Lukáš MAIER, Miroslav BOUDNÝ, Martin BABÁŠ, Ondřej KROUTIL, Marek MRÁZ, Robert VÁCHA and Kamil PARUCH. Synthesis and Profiling of Highly Selective Inhibitors of Methyltransferase DOT1L Based on Carbocyclic C-Nucleosides. Journal of Medicinal Chemistry. Washington: American Chemical Society, 2022, vol. 65, No 7, p. 5701-5723. ISSN 0022-2623. Available from: https://dx.doi.org/10.1021/acs.jmedchem.1c02228.

ŠIBOROVÁ, Marta, Tibor FÜZIK, Michaela PROCHÁZKOVÁ, Jiří NOVÁČEK, Martin BENEŠÍK, Anders S NILSSON and Pavel PLEVKA. Tail proteins of phage SU10 reorganize into the nozzle for genome delivery. Nature Communications. London: Nature Publishing Group, 2022, vol. 13, No 1, p. 5622-5634. ISSN 2041-1723. Available from: https://dx.doi.org/10.1038/s41467-022-33305-w.

HOUSER, Josef. Technologies for drug discovery at CEITEC Biomolecular Interactions and Crystallization CF. In InnoCore Day Trento. 2022.

DEMO, Gabriel, Ahmed Adel I. H. HASSAN, Pradeep HIRIYUR NAGARAJ, Ludmila VESELÁ, Hassan ZAFAR, Amiyaranjan DAS, Lucie SLÁMOVÁ and Sylva BRABENCOVÁ. THE CLOSE INTERPLAY OF TWO GENE EXPRESSION MACHINERIES. In Czech Chemical Society Symposium Series - Annual meeting of the National Institute of Virology and Bacteriology (NIVB). 2022. ISSN 2336-7210.

DUDOVÁ, Zdenka, Nathalie CONTE, Jeremy MASON, Dalibor STUCHLÍK, Radim PEŠA, Csaba HALMAGYI, Zinaida PEROVA, Abayomi MOSAKU, Ross THORNE, Alex FOLLETTE, Ľuboslav PIVARČ, Radim ŠAŠINKA, Muhammad USMAN, Steven NEUHAUSER, Dale A BEGLEY, Debra M KRUPKE, Massimiliano FRASSÀ, Alessandro FIORI, Riccardo CORSI, Luca VEZZADINI, Claudio ISELLA, Andrea BERTOTTI, Carol BULT, Helen PARKINSON, Enzo MEDICO, Terrence MEEHAN and Aleš KŘENEK. The EurOPDX Data Portal: an open platform for patient-derived cancer xenograft data sharing and visualization. BMC Genomics. BioMed Central, 2022, vol. 23, No 1, p. 1-11. ISSN 1471-2164. Available from: https://dx.doi.org/10.1186/s12864-022-08367-1.

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ŠIMEK, Jan, Kateřina KRÁLOVÁ and Jozef HRITZ. To homodimerize or to heterodimerize: story of 14-3-3 protein dimer formation. 2022.

EPASTO, Ludovica M., Kateryna CHE, Fanny KOZAK, Albina SELIMOVIC, Pavel KADEŘÁVEK and Dennis KURZBACH. Toward protein NMR at physiological concentrations by hyperpolarized water-Finding and mapping uncharted conformational spaces. Science advances. New York: American Association for the Advancement of Science, 2022, vol. 8, No 31, p. 1-7. ISSN 2375-2548. Available from: https://dx.doi.org/10.1126/sciadv.abq5179.

HASSAN, Ahmed Adel I. H., Pradeep HIRIYUR NAGARAJ, Adrien CHAUVIER, Nils WALTER and Gabriel DEMO. Translation initiation stages of coupled transcription-translation. In 16th Multinational congress on Microscopy. 2022. ISBN 978-80-11-02253-2.

GORRIS, Hans-Heiner and Zdeněk FARKA. Up and down the spectrum: upconversion nanocrystal and semiconductor material fused into a single nanocomposite. Light: Science & Applications. Springer Nature, 2022, vol. 11, No 179, p. 1-3. ISSN 2047-7538. Available from: https://dx.doi.org/10.1038/s41377-022-00875-9.

MAKHNEVA, Ekaterina, Dorota SKLENÁROVÁ, Julian BRANDMEIER, Hans-Heiner GORRIS, Petr SKLÁDAL and Zdeněk FARKA. Upconversion immunoassay with magnetic separation for the detection of cancer biomarkers. In 7th International Conference on Bio-Sensing Technology. 2022.

GORRIS, Hans-Heiner, Julian BRANDMEIER, Zdeněk FARKA, Petr SKLÁDAL, Antonín HLAVÁČEK, Matthias Jürgen MICKERT, Riikka PELTOMAA, Tero SOUKKA, Elena BENITO-PEÑO and María C. MORENO-BONDI. Upconversion-linked immunoassays (ULISA) for food and environmental monitoring and single-molecule (digital) diagnostic assays. In XXVIII Reunión Bienal de la Real Sociedad Española de Química (RSEQ) Granada. 2022. ISBN 978-84-09-42159-6.

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HOFERKOVÁ, Eva, Soňa KADÁKOVÁ, Václav ŠEDA, Tomáš LOJA, Gabriela MLADONICKÁ PAVLASOVÁ, Jan VERNER, Václav CHOCHOLA, Josef JAROŠ, Květoslava LIŠKOVÁ, Daniel FILIP, Josef VEČEŘA, Pedro FARIA ZENI, Jana DORAZILOVÁ, Eva ONDROUŠKOVÁ, Laura ONDRIŠOVÁ, Miroslav BOUDNÝ, Leoš KŘEN, Lucy VOJTOVÁ, Jiří MAYER and Marek MRÁZ. Versatile coculture systém to study chronic lymhocytic leukemia proliferation. In CEITEC PhD Conference, Brno. 2022.

PROCHÁZKOVÁ, Michaela, Tibor FÜZIK, Danyil GRYBCHUK, V. YURCHENKO and Pavel PLEVKA. Virion structure of Leishmania RNA virus 1. VIROLOGY. UNITED STATES: ACADEMIC PRESS INC ELSEVIER SCIENCE, 2022, vol. 577, DEC, p. 149-154. ISSN 0042-6822. Available from: https://dx.doi.org/10.1016/j.virol.2022.09.014.

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