Vyhledávání publikací

Vybrané publikace/výsledky

Distributed Tracking, Storage, and Re-use of Job State Information on the Grid (2004)
Practical approaches to Grid workload and resource management in the EGEE project (2004)
Bezpečnost v distribuovaném prostředí (2005)
Authentication and Authorization Mechanisms for Multi-Domain Grid Environments (2005)
Bezpečnostní infrastruktura METACentra (2005)
Správa soukromých klíčů pomocí hardwarových tokenů (2005)
The VOCE (VO Central Europe) Environment (2005)
A Credential Renewal Service for Long-Running Jobs (2005)
Do Gridu snadno a rychle - prostředí VOCE (2006)
VOCE---A Grid Environment for Central Europe (2006)
VOCE - Central European Production Grid Service (2006)
Zkušenosti s nasazováním HW tokenů pro uživatele METACentra (2006)
Kerberos and PKI Cooperation (2006)
Grid 2005 - 6th IEEE/ACM International Workshop on Grid Computing (2005)
Improving Security in Grids Using the Smart Card Technology (2006)
Zdokonalení autentizace použitím jednorázových hesel (2006)
Autentizační hardwarový token nové generace (2006)
Bezpečnost v gridech: autentizace uživatelů (2006)
MyProxy and EGEE (2006)
Usage of TPM under Xen (2007)
Identity Management in the Grid Environment (2007)
Kerberos and Grid systems (2007)
Message Level Security For Grid Services Using S/MIME (2007)
A Robust and Efficient Mechanism to Distribute Certificate Revocation Information Using the Grid Monitoring Architecture (2007)
Sealed Grid with Downloadable Services (2007)
Použití jednorázových hesel pro autentizaci v gridovém prostředí (2007)
Zkušenosti s nasazením PKI v distribuovaném prostředí (2007)
Experience with PKI in a Large-scale Distributed Environment (2007)
Central European Grid Infrastructure for Generic Applications (2007)
Trusted Distribution and Utilization of Virtual Machines (2007)
Nasazení federací ve velkém distribuovaném prostředí: systém pro správu interakcí léků (2007)
On Distribution Certificate Revocation Information in Grids (2007)
Transparent Security for Collaborative Environments (2007)
IPv6 in METACenter (2007)
Using CRL Push Delivery for Efficient Certificate Revocation Information Distribution in Grids (2007)
Federace identit aneb spolčení totožností (2007)
A federated framework for secure videoconference (2008)
IPv6 in METACenter (2008)
A Federated Framework for Secure Collaborative Systems (2008)
Survey of Authentication Mechanisms for Grids (2008)
Integrovaná správa pověření pro e-learningové systémy (2008)
Easing access to Grids using identity federations (2008)
Úskalí PKI v praxi - část II (2009)
Úskalí PKI v praxi - část I (2009)
Experiences with Massive PKI Deployment and Usage (2009)
Grid-enabled Desktop (2009)
Framework for non-Web application integration - CAT (2009)
Kerberos Authentication in Apache (2009)
Network Identity Manager Providers (2009)
Správa dat v gridových systémech (2009)
DiProNN: Distributed Programmable Network Node (2009)
Enhanced UDP Packet Reflector -- Erum (2009)
Robust Audio Tool (RAT) Supporting Separate Recording and Playback Audio Devices Selection (2009)
Fault-tolerant Access Control in Distributed Environment the MetaCentrum Authorization Infrastructure (2009)
Catch-All Virtual Organizations - Solution for Heterogeneous and Disperse Grid Users Communities (2010)
Testy softwarových VoIP klientů (2010)
User Centric Authentication for Web Applications (2010)
Something you may have wanted to know about L&B (2010)
Grid Security Developments (2010)
MetaCentrum Yearbook 2009 (2010)
MetaCentrum—e-Infrastructure for Computational and Data Challenges (2010)
Kterak posluchárny spojovati a ještě záznam poříditi aneb audiovizuální technika na MU (2011)
A Race for Security: Identifying Vulnerabilities on 50 000 Hosts Faster than Attackers (2011)
Intelligent logging server (2010)
Jak sledovat zranitelnosti na 50 000 strojích (2011)
Federated Access to Grids (2011)
Easing Access to Grids Using Moonshot (2011)
Reputation Based Trust Management System Supporting Collaboration in a Medical Application (2011)
EGI Security challenge 5: Lehce na cvičišti . . . (2011)
3.5 Million Smartmeters in the Cloud (2013)
Electrostatics' calculation parallel in time (2013)
Parallel methods for calculation of long-range electrostatic interactions (2013)
Fully-automated Occlusion-insensitive Norway Spruce Tree Reconstructions from 3D Point Cloud Data [poster] (2013)
Automatic Tree Reconstruction from its Laser Scan [poster] (2013)
Automatic reconstruction of Norway spruce tree models from LiDAR data (2013)
Three-dimensional Tree Reconstructions from Terrestrial LiDAR Scans (2013)
RemSig - Bezpečné úložiště digitálních certifikátů (2013)
Cloud-based Testbed for Simulation of Cyber Attacks (2014)
Vulnerability analysis methods for road networks (2014)
Convergence of Parareal Algorithm Applied on Molecular Dynamics Simulations (2014)
Using PKI to Provide Credential Delegation in non Web-based Federations (2015)
Monitoring Virtualized Infrastructure in the Context of Grid Job Execution (2013)
Optimizing CUDA code by kernel fusion: application on BLAS (2015)
Acceleration of dRMSD Calculation and Efficient Usage of GPU Caches (2015)
OpenCL Kernel Fusion for GPU, Xeon Phi and CPU (2015)
Nonlinear vs. linear biasing in Trp-cage folding simulations (2015)
Accurate Fitting SAXS Curves with NMR Structure Ensembles (2015)
KYPO - Kybernetický polygon (2015)
Software pro konfiguraci a monitorování virtuálního prostředí KYPO (2015)
Ruby Benchmark Suite using Docker (2015)
První návrh cílové infrastruktury pro provoz systému IRIS (2015)
Iterative Optimization of a Multi-compartmental Air Quality Modelling System (2015)
NEEMP – nástroj pro parametrizaci EEM (2016)
Numerical and experimental investigation of three-dimensional cavitating flow around the straight NACA2412 hydrofoil (2016)
Parametrizace ekvalizace elektronegativity metodou diferenciální evoluce (2016)
NEEMP: software for validation, accurate calculation and fast parameterization of EEM charges (2016)
Guided Optimization Method for Fast and Accurate Atomic Charges Computation (2016)
Accelerated RMSD Calculation for Molecular Metadynamics (2016)
Reducing the number of mean-square deviation calculations with floating close structure in metadynamics (2017)
Direct SAXS Curve Fitting with an Ensable of Conformations (2016)
CaverDock 1.0 (2017)
Autotuning of OpenCL Kernels with Global Optimizations (2017)
Kernel Tuning Toolkit (2018)
Acceleration of Mean Square Distance Calculations with Floating Close Structure in Metadynamics Simulations (2018)
Loss of information in quantum guessing game (2018)
Layered quantum key distribution (2018)
cuFFTAdvisor (2018)
Measurements in two bases are sufficient for certifying high-dimensional entanglement (2018)
Performance analysis and autotuning setup of the cuFFT library (2018)
A GPU acceleration of 3-D Fourier reconstruction in cryo-EM (2019)
CaverDock: A Novel Method for the Fast Analysis of Ligand Transport (2020)
CaverDock: a molecular docking-based tool to analyse ligand transport through protein tunnels and channels (2019)
Caver Web 1.0: identification of tunnels and channels in proteins and analysis of ligand transport (2019)
A deterministic approach for rapid identification of the critical links in networks (2019)
Multi-phase ELAStic Aggregates (MELASA) software tool for modeling anisotropic elastic properties of lamellar composites (2020)
Exploiting historical data: pruning autotuning spaces and estimating the number of tuning steps (2019)
Big Data - overview, basic concepts and practical use in research (2019)
Fast Screening of Inhibitor Binding/Unbinding using Novel Software Tool CaverDock (2019)
Software pro simulaci obecných i kritických informačních infrastruktur (2019)
Software pro detekci a analýzu napadení KII (2019)
Nástroje pro ověřování bezpečnosti SW/HW a simulaci útoků na prvky kritické informační infrastruktury (2019)
A benchmark set of highly-efficient CUDA and OpenCL kernels and its dynamic autotuning with Kernel Tuning Toolkit (2020)
Caver web: identification of tunnels and channels in proteins and analysis of ligand transport (2019)
Exploiting historical data: Pruning autotuning spaces and estimating the number of tuning steps (2020)
FlexAlign: An Accurate and Fast Algorithm for Movie Alignment in Cryo-Electron Microscopy (2020)
Exploratory Analysis of File System Metadata for Rapid Investigation of Security Incidents (2020)
Exploring Protein Folding Space with Neural Network Guided Simulations (2020)
Experimental creation of multi-photon high-dimensional layered quantum states (2020)
ANALYZA – Datový sklad (2020)
ANALYZA – Výpočetní a orchestrační subsystém (2020)
ANALYZA – Vizualizační komponenta – Visilant (2020)
High-Dimensional Pixel Entanglement: Efficient Generation and Certification (2020)
4D-GRAPHS (2021)
Semi-device-independent random number generation with flexible assumptions (2021)
DeepAlign, a 3D Alignment Method based on Regionalized Deep Learning for Cryo-EM (2021)
Simulation of Ligand Transport in Receptors Using CaverDock (2021)
Quantum Key Distribution Overcoming Extreme Noise: Simultaneous Subspace Coding Using High-Dimensional Entanglement (2021)
Choice of mutually unbiased bases and outcome labeling affecting measurement outcome secrecy (2021)
Device-independent bounds from Cabello's nonlocality argument (2021)
Model for optimizing quantum key distribution with continuous-wave pumped entangled-photon sources (2021)
Kernel Tuning Toolkit 2.0 (2021)
Image Processing in Cryo-Electron Microscopy of Single Particles: The Power of Combining Methods (2021)
Screening of world approved drugs against highly dynamical spike glycoprotein of SARS-CoV-2 using CaverDock and machine learning (2021)
Advances in Xmipp for Cryo–Electron Microscopy: From Xmipp to Scipion (2021)
Approximating deformation fields for the analysis of continuous heterogeneity of biological macromolecules by 3D Zernike polynomials (2021)
Using hardware performance counters to speed up autotuning convergence on GPUs (2022)
Pathways for Entanglement-Based Quantum Communication in the Face of High Noise (2021)
Searching CUDA code autotuning spaces with hardware performance counters: data from benchmarks running on various GPU architectures (2021)
Complex simulation workflows in containerized high-performance environment (2021)
Property Map Collective Variable as a Useful Tool for a Force Field Correction (2022)
The Cost of Improving the Precision of the Variational Quantum Eigensolver for Quantum Chemistry (2022)
On bias, variance, overfitting, gold standard and consensus in single-particle analysis by cryo-electron microscopy (2022)
Virtualizované prostředí pro trénink CSIRT týmu (2021)
Implementation of quantum compression on IBM quantum computers (2022)
Improving ligand transport trajectory within flexible receptor in CaverDock (2022)
Best-Practice Aspects of Quantum-Computer Calculations: A Case Study of the Hydrogen Molecule (2022)
Finite-Function-Encoding Quantum States (2022)
Self-testing quantum states via nonmaximal violation in Hardy's test of nonlocality (2022)
Computational enzyme design for metabolic engineering (2021)
Detection of Malicious Code in SSH programs. (2022)
Estimating conformational landscapes from Cryo-EM particles by 3D Zernike polynomials (2023)
CopAS: A Big Data Forensic Analytics System (2023)
Kernel Tuning Toolkit (2023)
Text-to-Motion Retrieval: Towards Joint Understanding of Human Motion Data and Natural Language (2023)
ZART: A Novel Multiresolution Reconstruction Algorithm with Motion-blur Correction for Single Particle Analysis (2023)
Nonlocal Temporal Interferometry for Highly Resilient Free-Space Quantum Communication (2023)
Quantum key distribution rates from semidefinite programming (2023)
Distribution of genuine high-dimensional entanglement over 10.2 km of noisy metropolitan atmosphere (2023)
Umpalumpa: a framework for efficient execution of complex image processing workloads on heterogeneous nodes (2023)
An insight into the functional genomics and species classification of Eudiplozoon nipponicum (Monogenea, Diplozoidae), a haematophagous parasite of the common carp Cyprinus carpio (2023)
Reproducible experiments with Learned Metric Index Framework (2023)
Towards a Benchmarking Suite for Kernel Tuners (2023)
pyCaverDock: Python implementation of the popular tool for analysis of ligand transport with advanced caching and batch calculation support (2023)
CoPAS: the Modular Data Analytics Tool (2023)
SISAP 2023 Indexing Challenge – Learned Metric Index (2023)
Bioactive molecules released by Heterorhabditis bacteriophora in response to various activation materials (2023)
AlphaFind: Discover structure similarity across the entire known proteome (2024)
AlphaFind: discover structure similarity across the proteome in AlphaFold DB (2024)
Scaling Learned Metric Index to 100M Datasets (2024)
Quantum Chemistry-Based Prediction of Electron Ionization Mass Spectra for Environmental Chemicals (2024)
AlphaFind — discover structure similarity across the proteome in AlphaFold DB (2024)
3DZD: Protein structural embeddings of ESM Atlas (2024)
Learned Metric Index (2024)
LMI-10: Protein structural embeddings of AlphaFold DB (2024)
GraSR: Protein structural embeddings of AlphaFold DB (2024)
LMI-30: Protein structural embeddings of AlphaFold DB (2024)
AlphaFind — discover structure similarity across the proteome in AlphaFold DB (2024)
AlphaFind (2024)
Fast, structure-based searching in a large-scale protein data repository (2024)
3DZD: Protein structural embeddings of AlphaFold DB v4 (2024)
3D-af-Surfer: Protein structural embeddings of AlphaFold DB (2024)
AlphaFind: Discover structure similarity across the entire known proteome – data and model (2024)
A methodology for comparing optimization algorithms for auto-tuning (2024)
Towards Dynamic Autotuning of SpMV in CUSP Library (2024)
Efficient Code Region Characterization Through Automatic Performance Counters Reduction Using Machine Learning Techniques (2024)
Speech production under stress for machine learning: multimodal dataset of 79 cases and 8 signals (2024)
RBP-Tar – a searchable database for experimental RBP binding sites (2024)
A dataset of hyperspectral Look-Up Tables for 3.5 million traits and structural combinations of Central European temperate broadleaf forests (2024)
Simulated trait and spectroscopy data to support retrieval of forest biophysical parameters from spaceborne imaging spectroscopy (2024)
High spatial and spectral resolution dataset of hyperspectral look-up tables for 3.5 million traits and structural combinations of Central European temperate broadleaf forests (2024)
Analysis of metadynamics simulations by metadynminer.py (2024)
Scientific Dataset Management System for the Research Institute Based on Onedata (2024)
Beyond Metadata: Leveraging Similarity Search in Molecular Dynamics Data (2024)

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