Curriculum Vitae

Curriculum vitae

Name, first names, scientific degrees

• RNDr. Katarína Furmanová, Ph.D.

Department/Faculty/University

• Department of Visual Computing, Faculty of Informatics, Masaryk University

Function, current position

• Assistant Professor

Education and academic qualifications

• 2015 – 2019: European Doctorate in Informatics, Masaryk University, Brno, Czech Republic

  2015 – 2019: Master‘s Degree in Computer Graphics, Masaryk University, Brno, Czech Republic

  2015 – 2019: Bachelor’s Degree in Computer Graphics and Image Processing, Masaryk University, Brno, Czech Republic

Professional experience

• since 12/2020: Assistant Professor, Masaryk University, Brno, Czech Republic

  09/2019 – 09/2020: Postdoctoral Fellowship, Aarhus University Hospital, Aarhus, Denmark

  09/2019 – 12/2019: PhD Candidate, Masaryk University, Brno, Czech Republic

Teaching activities

• Visualization (PV251, PA2014), Computer Graphics (PB009, PV160, PV112, PA093)

Research activities

• Medical visualization, molecular visualization, visual analytics

Internship and stays for the purpose of study or work

• 11/2019 – 12/2019: Research Stay at TU Wien, Vienna, Austria

• 2018/10/26 – 2019/02/15: University of Bergen, Bergen, Other programs, NOR
• 2016/09/12 – 2017/01/31: Johannes Kepler University Linz, Linz, Erasmus+, AUT
• 2013/03/01 – 2013/06/14: University of Pavia, Pavia, LLP Erasmus, ITA

Non-university activities

• VCBM 2021 conference web chair

  Program Committee for the IEEE VIS 2020

  Conference & Journal Reviewing (e.g., IEEE VIS, C&G)

  Local organization and volunteering for EG EuroVis 2018 and EG VCBM 2019 conferences

Major publications

• FURMANOVÁ, Katarína, Adam JURČÍK, Barbora KOZLÍKOVÁ, Helwig HAUSER and Jan BYŠKA. Multiscale Visual Drilldown for the Analysis of Large Ensembles of Multi-Body Protein Complexes. IEEE Transactions on Visualization and Computer Graphics. IEEE, 2020, vol. 26, No 1, p. 843-852. ISSN 1077-2626. Available from: https://dx.doi.org/10.1109/TVCG.2019.2934333. URL info
• FURMANOVÁ, Katarína, Samuel GRATZL, Holger STITZ, Thomas ZICHNER, Miroslava JAREŠOVÁ, Alexander LEX and Marc STREIT. Taggle: Combining Overview and Details in Tabular Data Visualizations. Information Visualization. 2020, vol. 19, No 2, p. 114-136. ISSN 1473-8716. Available from: https://dx.doi.org/10.1177/1473871619878085. URL info
• FURMANOVÁ, Katarína, Ondřej VÁVRA, Barbora KOZLÍKOVÁ, Jiří DAMBORSKÝ, Vojtěch VONÁSEK, David BEDNÁŘ and Jan BYŠKA. DockVis: Visual Analysis of Molecular Docking Trajectories. Computer Graphics Forum. Wiley-Blackwell, 2020, vol. 39, No 6, p. 452-464. ISSN 0167-7055. Available from: https://dx.doi.org/10.1111/cgf.14048. URL info
• FURMANOVÁ, Katarína, Nicolas GROSSMANN, Ludvig P. MUREN, Oscar CASARES-MAGAZ, Vitali MOISEENKO, John P. EINCK, Eduard M. GRÖLLER and Renata G. RAIDOU. VAPOR: Visual Analytics for the Exploration of Pelvic Organ Variability in Radiotherapy. Computers & Graphics. 2020, vol. 91, October 2020, p. 25-38. ISSN 0097-8493. Available from: https://dx.doi.org/10.1016/j.cag.2020.07.001. URL info
• RAIDOU, Renata Georgia, Katarína FURMANOVÁ, Nicolas GROSSMANN, Oscar CASARES-MAGAZ, Vitali MOISEENKO, John P EINCK, Eduard GRÖLLER and Ludvig P MUREN. Lessons learnt from developing visual analytics applications for adaptive prostate cancer radiotherapy. Online. In Christina Gillmann, Michael Krone, Guido Reina, Thomas Wischgoll. VisGap - The Gap between Visualization Research and Visualization Software. Norrköping, Sweden: The Eurographics Association, 2020, p. 51-58. ISBN 978-3-03868-125-0. Available from: https://dx.doi.org/10.2312/visgap.20201110. URL info
• FURMANOVÁ, Katarína, Renata G RAIDOU, Nicolas GROSSMANN, Oscar CASARES-MAGAZ, Vitali MOISEENKO, John P EINCK and Ludvig P MUREN. Using multiple planning scans to predict organ shape variability during RT for prostate cancer. In ESTRO 2020. 2020. info
• JURČÍK, Adam, Katarína FURMANOVÁ, Jan BYŠKA, Vojtěch VONÁSEK, Ondřej VÁVRA, Pavol ULBRICH, Helwig HAUSER and Barbora KOZLÍKOVÁ. Visual Analysis of Ligand Trajectories in Molecular Dynamics. Online. In IEEE Pacific Visualization Symposium 2019. Bangkok, Thailand: IEEE, 2019, p. 212-221. ISBN 978-1-5386-9226-4. Available from: https://dx.doi.org/10.1109/PacificVis.2019.00032. info
• FURMANOVÁ, Katarína, Jan BYŠKA, Eduard M. GRÖLLER, Ivan VIOLA, Jan PALEČEK and Barbora KOZLÍKOVÁ. COZOID: COntact ZOne IDentifier for visual analysis of protein-protein interactions. BMC Bioinformatics. 2018, vol. 19, APR, p. 1-17. ISSN 1471-2105. Available from: https://dx.doi.org/10.1186/s12859-018-2113-6. info
• JURČÍK, Adam, David BEDNÁŘ, Jan BYŠKA, Sérgio Manuel MARQUES, Katarína FURMANOVÁ, Lukáš DANIEL, Piia Pauliina KOKKONEN, Jan BREZOVSKÝ, Ondřej STRNAD, Jan ŠTOURAČ, Antonín PAVELKA, Martin MANAK, Jiří DAMBORSKÝ and Barbora KOZLÍKOVÁ. CAVER Analyst 2.0: Analysis and Visualization of Channels and Tunnels in Protein Structures and Molecular Dynamics Trajectories. Bioinformatics. 2018, vol. 34, No 20, p. 3586-3588. ISSN 1367-4803. Available from: https://dx.doi.org/10.1093/bioinformatics/bty386. URL info
• FURMANOVÁ, Katarína, Miroslava JAREŠOVÁ, Jan BYŠKA, Adam JURČÍK, Julius PARULEK, Helwig HAUSER and Barbora KOZLÍKOVÁ. Interactive Exploration of Ligand Transportation through Protein Tunnels. BMC Bioinformatics. BioMed Central, 2017, vol. 18, No 22, p. 1-16. ISSN 1471-2105. Available from: https://dx.doi.org/10.1186/s12859-016-1448-0. URL info
• FURMANOVÁ, Katarína, Petra URBANOVÁ and Barbora KOZLÍKOVÁ. AnthroVis: Visual Analysis of 3D Mesh Ensembles for Forensic Anthropology. In Vítezslav Beran, Pavel Zemcík, Ivan Viola, Jirí Bittner, Jaroslav Rozman. Proceedings of the 33rd Spring Conference on Computer Graphics. Brno, Czech Republic: ACM, 2017, p. 171-179. ISBN 978-1-4503-5107-2. Available from: https://dx.doi.org/10.1145/3154353.3154363. info

2021/03/29