Bi9061 Bioinformatics - practice

Faculty of Science
Autumn 2009
Extent and Intensity
0/1/0. 2 credit(s) (fasci plus compl plus > 4). Type of Completion: z (credit).
Teacher(s)
prof. Mgr. Jiří Damborský, Dr. (lecturer)
Mgr. Eva Šebestová, Ph.D. (assistant)
Guaranteed by
prof. Mgr. Jiří Damborský, Dr.
Department of Experimental Biology – Biology Section – Faculty of Science
Timetable of Seminar Groups
Bi9061/01: Wed 16:00–17:50 F01B1/709, J. Damborský, E. Šebestová
Bi9061/02: Wed 9:00–10:50 F01B1/709, J. Damborský, E. Šebestová
Prerequisites
(NOW( Bi9060 Bioinformatics ) || NOW( Bi5000 PC in molecular biology )) && ! C9081 Bioinformatics
ability to study in English
Course Enrolment Limitations
The course is also offered to the students of the fields other than those the course is directly associated with.
The capacity limit for the course is 60 student(s).
Current registration and enrolment status: enrolled: 0/60, only registered: 0/60, only registered with preference (fields directly associated with the programme): 0/60
fields of study / plans the course is directly associated with
there are 14 fields of study the course is directly associated with, display
Course objectives
In practical part of the Bioinformatics course we will demonstrate a number of the programs on the Internet that are used most commonly in DNA and proteomic research.
Syllabus
  • I. INTRODUCTION
  • II. INFORMATION NETWORKS
  • III. PROTEIN INFORMATION RESOURCES
  • IV. GENOME INFORMATION RESOURCES
  • V. DNA SEQUENCE ANALYSIS
  • VI. PAIRWISE SEQUENCE ALIGNMENT
  • VII. MULTIPLE SEQUENCE ALIGNMENT
  • VIII. SECONDARY DATABASE SEARCHING
  • IX. ANALYSIS PACKAGES
  • X. PROTEIN STRUCTURE MODELLING
Literature
  • Introduction to Bioinformatics, T.K. Attwood & D.J. Parry-Smith, Longman, Essex, 1999.
Teaching methods
class discussion, group projects
Assessment methods
Written test: 50 questions Oral examination: practical (in Czech or in English)
Language of instruction
Czech
Follow-Up Courses
Further Comments
Study Materials
The course can also be completed outside the examination period.
The course is taught annually.
Listed among pre-requisites of other courses
Teacher's information
http://loschmidt.chemi.muni.cz/peg/loadframe.html?courses.html
The course is also listed under the following terms Autumn 2010 - only for the accreditation, Autumn 2008, Autumn 2010, Autumn 2011, Autumn 2011 - acreditation, Autumn 2012, Autumn 2013, Autumn 2014, Autumn 2015, Autumn 2016, autumn 2017, Autumn 2018.
  • Enrolment Statistics (Autumn 2009, recent)
  • Permalink: https://is.muni.cz/course/sci/autumn2009/Bi9061