PřF NMICP Microscopy
Name in Czech: Mikroskopie
master's full-time single-subject, language of instruction: Czech
Included in the programme: PřF N-MIC Microscopy
master's full-time single-subject, language of instruction: Czech
Included in the programme: PřF N-MIC Microscopy
Study-related information
- Parts of the final state examination and its contentA – Exam in physical optics. During the exam, the applicant must demonstrate an understanding of the physical principles of electron and light optics, namely the physical foundations of the theories and of the application methods as well as components of optical devices. The exam proves that the student has mastered the theoretical skills needed for profession as a physicist. To prepare for the exam, students need to overview several broad ranges of questions covering physical principles of optics of electromagnetic radiation, particle optics, physics of sources and detectors, physical principles of imaging methods. The exam is oral.
B – Microscopy test. During the exam, the candidate must demonstrate an understanding of electron and light microscopy methods, their physical nature and practical applications for instrument research and development, as well as the principles of related devices and their components. The exam proves that the student has mastered the practical skills and basic knowledge required for physicists in research and production, which are necessary for the development of microscopic techniques or as an application specialist in the future profession. The exam is oral.
C – Thesis defense. During the defense, the student demonstrates an understanding of the chosen issue, the ability to report on the the obtained results and argue in a discussion. - Requirements of the studyThe student prepares properly in the field of theoretical and practical teaching, pays attention to the understanding of experimental methods and their correct processing and analysis of data obtained during practical teaching.
- Suggestion of theses topics and the topics of defended thesesProposals for the topics of future diploma theses will be similar to topics that have been recently defended in the area of interest of this degree program, for example:
– Structure determination of proteins with flexible domains using cryo-electron microscopy
– Characterization of Flavivir neutralization by antibodies using cryo-electron microscopy
– Implementation of advanced methods for correcting the movement of the specimen in the electron microscope
– Fabrication and characterization of a thin film electron biprism
– Thermally assisted photoemission at 405 nm
– Study of hydrogel structure using cryo-SEM
- Development and characterization of carrier films for quantitative imaging in scanning transmission electron microscopy
Recommended progress through the study plan
Diplomová práce (min 20kr.)
Povinné předměty (P a PV více než 90kr.)
Code | Name | Type of Completion | Credits | Term | Profile Cat. |
PřF:C9530 | Structure of biomacromolecules | zk | 2+2 | 1 | P |
PřF:C9940 | 3-Dimensional Transmission Electron Microscopy (3DEM) | zk | 2+2 | 3 | P |
PřF:F7811 | Electron optics and Microscopy 1 | zk | 3+2 | 1 | Z |
PřF:F7800 | Theory and construction of optical systems | zk | 3+2 | 1 | Z |
PřF:F7810 | Microscopy lab I | z | 3 | 1 | P |
PřF:F7815 | Practise in microscopy I | k | 4 | 1 | P |
PřF:F7840 | Transmission electron microscopy | k | 2+1 | 2 | Z |
PřF:F7850 | Selected topics in electron microscopy | k | 2+1 | 1 | Z |
PřF:F8810 | Microscopy lab II | z | 6 | 2 | P |
PřF:F8811 | Electron optics and Microscopy 2 | zk | 3+2 | 2 | P |
PřF:F8815 | Practise in microscopy II | k | 8 | 2 | P |
PřF:F9810 | Microscopy lab III | z | 6 | 3 | P |
PřF:F9851 | Seminary for Diploma thesis II | z | 1 | 3 | - |
PřF:FA851 | Seminary for Diploma thesis III | z | 1 | 4 | - |
FI:PB130 | Introduction to Digital Image Processing | zk | 3+2 | 3 | P |
63 credits |
Selective courses
Language
Blok "Pokročilý cizí jazyk": student musí před státní závěrečnou zkouškou absolvovat alespoň jeden z uvedených předmětů (2 kr.) pokročilé jazykové zkoušky.
Code | Name | Type of Completion | Credits | Term | Profile Cat. |
PřF:JA002 | Advanced Examination in English for Specific Purposes - Science | zk | 2 | - | - |
PřF:JF002 | Advanced Examination in French for Specific Purposes - Science | zk | 2 | - | - |
PřF:JN002 | Advanced Examination in German for Specific Purposes - Science | zk | 2 | - | - |
PřF:JS002 | Advanced Examination in Spanish for Specific Purposes - Science | zk | 2 | - | - |
8 credits |
Odborné předměty
Student si volí z níže uvedeného seznamu předměty za alespoň 10 kreditů. Student musí za studium dosáhnout celkem 120 kreditů, k doplnění tak využije tyto předměty, případně jiné předměty z nabídky PřF nebo FI podle zaměření diplomové práce. Některé z předmětů se vyučují pouze jednou za dva roky. Od druhého semestru doporučujeme při výběru konzultaci s vedoucím diplomové práce.
Code | Name | Type of Completion | Credits | Term | Profile Cat. |
PřF:Bi1700 | Cell Biology | zk | 2+2 | 1 | - |
PřF:C3002 | Nanobiotechnology | zk | 2+2 | 2 | - |
PřF:F4160 | Vacuum physics | zk | 2+2 | 2 | - |
PřF:F4500 | Python for physicists | k | 3+1 | 4 | - |
PřF:F5090 | Electronics | zk | 2+2 | 2 | - |
PřF:F5330 | Basic numerical methods | z | 3 | 1 | - |
PřF:F5900 | Physics in business | z | 2 | 2 | - |
PřF:F6150 | Advanced numerical methods | k | 3+1 | 4 | - |
PřF:F6530 | Spectroscopy techniques | k | 3+1 | 3 | - |
PřF:F6540 | Basics of semiconductor technology | k | 3+1 | 3 | - |
PřF:F7360 | Characterization of Surfaces and Thin Films | k | 2+1 | 2 | - |
PřF:F7560 | Simulation using Monte Carlo method | z | 2 | 3 | - |
PřF:F8370 | Present-day methods in physical modelling | k | 3+1 | 2 | - |
PřF:FB820 | Structural electron microscopy | zk | 2+2 | 3 | - |
FI:PV131 | - | - | 4 | - | |
50 credits |
Elective courses
Code | Name | Type of Completion | Credits | Term | Profile Cat. |
PřF:F7320 | Atomic force microscopy and other methods of scanning probe microscopy | k | 2+1 | 3 | - |
3 credits |