PřF:Bi7311 Mol. biol. of procar.-practice - Course Information
Bi7311 Molecular Biology of Procaryotes - Laboratory Course
Faculty of ScienceAutumn 2019
- Extent and Intensity
- 0/2/0. 2 credit(s). Type of Completion: z (credit).
- Teacher(s)
- Mgr. Ivana Mašlaňová, Ph.D. (seminar tutor)
doc. RNDr. Vladislava Růžičková, CSc. (seminar tutor)
Mgr. Adéla Finstrlová, Ph.D. (assistant) - Guaranteed by
- Mgr. Ivana Mašlaňová, Ph.D.
Department of Experimental Biology – Biology Section – Faculty of Science
Contact Person: Mgr. Ivana Mašlaňová, Ph.D.
Supplier department: Department of Experimental Biology – Biology Section – Faculty of Science - Timetable
- Tue 13:00–16:50 E25/119, Thu 8:00–9:50 E25/119
- Timetable of Seminar Groups:
Bi7311/Bi7311_2: No timetable has been entered into IS. A. Finstrlová, I. Mašlaňová, V. Růžičková - Prerequisites
- ( B2050 General microbiology || Bi2050c General microbiology pr. || B4070 General mikrobiology || B4090 General microbiology || Bi4090c General microbiology - pr. ) && NOW( Bi7120 Molecular biology of prokaryotes )
Basic knowledge from molecular biology of the Prokaryotes. Basic techniques of microbiology and molecular biology. - Course Enrolment Limitations
- The course is only offered to the students of the study fields the course is directly associated with.
The capacity limit for the course is 32 student(s).
Current registration and enrolment status: enrolled: 0/32, only registered: 0/32 - fields of study / plans the course is directly associated with
- Bioanalytical Laboratory Diagnostics in Medicine - Medical Genetics and Molecular Diagnostics (programme PřF, N-LGM)
- Medical Genetics and Molecular Diagnostics (programme PřF, N-BI)
- Molecular Biology and Genetics (programme PřF, N-EXB)
- Molecular Biology and Genetics (programme PřF, N-EXB, specialization Antropogenetika)
- Molecular Biology and Genetics (programme PřF, N-EXB, specialization Molekulární biologie a genetika)
- Molecular Biology and Genetics (programme PřF, N-MBG)
- Course objectives
- The aim of the practice is to acquire knowledge about basic molecular biology methods used for prokaryotic genome analysis, bacterial genetics methods and to understand of principles of horizontal gene transfer. Students will be introduced to identification of changes in prokaryotic genomes due to mutations, horizontal gene transfer via transduction, conjugation and transformation. The practice practically completes the content of lectures from Molecular Biology of Prokaryotes (Bi7120). Students will comprehend the mechanisms of prokaryotic evolution in practice and understand the techniques that can be used to manipulate bacterial genomes.
- Learning outcomes
- At the end of this course, students should be able to design and perform basic laboratory experiments focused on genetic studies of Escherichia coli and selected species from Gram-positive cocci.
- Syllabus
- 1. Purification of lytic phage particles with therapeutic usage in CsCl gradient.
- 2. Transduction. The transfer of plasmid resistance genes. Induction of phage phiJB by UV-irradiation, determining the transduction frequency, selection of transductants.
- 3. Determination of plasmid copy number (PCN) by qPCR.
- 4. Pulsed-field gel electrophoresis of bacterial genomic DNA (preparation of samples, digestion with restriction endonuclease SmaI, PFGE).
- 5. Conjugation of Escherichia coli.
- 6. Electoporation of plasmid DNA to recipient strains. Determining the transformation frequency.
- 7. Monitoring of phage endolysin expression. Isolation of RNA, transcription of RNA into cDNA, separation of proteins by SDS-PAGE.
- 8. Isolation of spontaneous mutants of Staphylococcus aureus resistant to antibiotics on gradient agar plates.
- Literature
- SNYDER, Larry and Wendy CHAMPNESS. Molecular genetics of bacteria. 2nd ed. Washington: ASM Press, 2003, xvi, 566. ISBN 155581204X. info
- MILLER, Jeffrey H. A Short course in bacterial genetics : a laboratory manual and handbook for Escherichia coli and related bacteria. New York: Cold Spring Harbor Laboratory Press, 1992, 456 s. ISBN 0879693495. info
- ROSYPAL, Stanislav. Obecná bakteriologie. 1. vyd. Praha: Státní pedagogické nakladatelství, 1981, 749 s. info
- Teaching methods
- The course is taught in research microbiology and molecular biology laboratories. Students perform practical experiments according to the instructions of teacher and according to printed manuals.
- Assessment methods
- The course is completed after work out an elaborate and pass a writen test.
- Language of instruction
- Czech
- Follow-Up Courses
- Further Comments
- Study Materials
The course can also be completed outside the examination period.
The course is taught annually.
- Enrolment Statistics (Autumn 2019, recent)
- Permalink: https://is.muni.cz/course/sci/autumn2019/Bi7311