VLLM0522c Medical Microbiology II - practice

Faculty of Medicine
Autumn 2009
Extent and Intensity
0/3/0. 2 credit(s). Type of Completion: z (credit).
Teacher(s)
MUDr. Lenka Černohorská, Ph.D. (seminar tutor)
Mgr. Monika Dvořáková Heroldová, Ph.D. (seminar tutor)
Ing. Veronika Holá, Ph.D. (seminar tutor)
RNDr. Radek Horváth, Ph.D. (seminar tutor)
Mgr. Barbora Mališová, Ph.D. (seminar tutor)
prof. MUDr. Filip Růžička, Ph.D. (seminar tutor)
doc. MUDr. Vladana Woznicová, Ph.D. (seminar tutor)
MUDr. Ondřej Zahradníček (seminar tutor)
Ing. Magdalena Flasarová (assistant)
Iva Holešovská (assistant)
Guaranteed by
MUDr. Ondřej Zahradníček
Department of Microbiology – Institutions shared with St. Anne's Faculty Hospital – Faculty of Medicine
Contact Person: MUDr. Ondřej Zahradníček
Timetable of Seminar Groups
VLLM0522c/01: Fri 10:20–12:50 MiÚ N02112, F. Růžička
VLLM0522c/02: Fri 10:20–12:50 MiÚ N02112, F. Růžička
VLLM0522c/03: Fri 7:30–10:00 MiÚ N02112, B. Mališová
VLLM0522c/04: Fri 7:30–10:00 MiÚ N02112, B. Mališová
VLLM0522c/05: Mon 10:20–12:50 MiÚ N02112, L. Černohorská
VLLM0522c/06: Mon 10:20–12:50 MiÚ N02112, L. Černohorská
VLLM0522c/07: Mon 7:30–10:00 MiÚ N02112, L. Černohorská
VLLM0522c/08: Mon 7:30–10:00 MiÚ N02112, L. Černohorská
VLLM0522c/09: Tue 10:20–12:50 MiÚ N02112, R. Horváth
VLLM0522c/10: Tue 10:20–12:50 MiÚ N02112, R. Horváth
VLLM0522c/11: Tue 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/12: Tue 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/13: Thu 10:20–12:50 MiÚ N02112, O. Zahradníček
VLLM0522c/14: Thu 10:20–12:50 MiÚ N02112, O. Zahradníček
VLLM0522c/15: Thu 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/16: Thu 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/17: Wed 10:20–12:50 MiÚ N02112, L. Černohorská
VLLM0522c/18: Wed 10:20–12:50 MiÚ N02112, L. Černohorská
VLLM0522c/19: Wed 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/20: Wed 7:30–10:00 MiÚ N02112, O. Zahradníček
VLLM0522c/30: No timetable has been entered into IS. O. Zahradníček
VLLM0522c/31: No timetable has been entered into IS. O. Zahradníček
VLLM0522c/33: No timetable has been entered into IS. O. Zahradníček
VLLM0522c/99V: No timetable has been entered into IS.
Prerequisites
VSBC0221p Biochemistry I -lect. && VLLM0421c Med.Microbiol. && VSET021 Medical Ethics I && ( VSLT0221s Bas. Med. Terminol. II -s || VSLT011s Bas. Med. Terminology -l )
Necessary for subject absolution is knowledge of topics from VLLM0421c. This knowledge is considered obvious and topics of first semester will not be explained repeatedly
Course Enrolment Limitations
The course is also offered to the students of the fields other than those the course is directly associated with.
fields of study / plans the course is directly associated with
Course objectives
Subject follows first (methodological) part of practical education of microbiology (VLLM0421c).
After the course, the students are supposed to understand basics of diagnostic medical bacteriology, mycology and parasitology (virology was allready done in the 1st part).
Namely the student are supposed to understand basic diagnostic approaches for
* G+ bacteria: staphylococci, streptococci, enterococci, coryneforms, listeriae, bacilli
* G- bacteria: enterobacteriae, vibria, aeromonads, campylobacters, helicobacters, pseudomonads, other G- non-fermenters, haemophili, pasteurellae, neisseriae, moraxellae, basically also legionellae, brucellae, bordetellae and francisellae
* anaerobic bacteria: clostridia and spore non-forming anaerobes
* acid fast and partially acid fast bacteria: Mycobacterium, Actinomyces, Nocardia
* spiral bacteria: genera Borrelia, Treponema and Leptospira
* basic medically important yeasts, dermatophytes and other micromycetes
* basic medically imprortant protozoa, roundworms, flukes, tapeworms and arthropods

They should also have a basic survey in
* problematics of biofilm detection (including testing of effectivity of antibiotics to biofilm)
* basic processi of clinical microbiology (indication, sampling, material transport, specimen processing, result releasing, result interpretation)

Those interested in deeper knowledge in antibiotic problematic and clinical microbiology may later register to the subject VSAT081 (Basics of antimicrobial therapy)
Syllabus
  • Curriculum of lessons in Medical Microbiology II (3rd year, autumn term)
  • Practical lessons
  • P01 Diagnostics of staphylococci
  • P02 Diagnostics of streptococci
  • P03 Diagnostics of other G+ bacteria
  • P04 Diagnostics of enterobacteriaceae
  • P05 Diagnostics of G- bacteria II
  • P06 Diagnostics of G- bacteria III
  • P07 Diagnostics of anaerobic bacteria
  • P08 Diagnostics of acid-fast bacteria
  • P09 Diagnostics of spiral bacteria
  • P10 Diagnostics of fungi
  • P11 Diagnostics of parasites
  • P12 Introduction to biofilm problematic in bacteriological diagnostics
  • P13 Clinical microbiology I
  • P14 Clinical microbiology II
  • P14 Biofilm in Medical Microbiology
  • Teacher informs students about eventual imparities
Literature
  • VOTAVA, Miroslav. Lékařská mikrobiologie obecná. (General Medical Microbiology.). 1st ed. Brno: Neptun, 2001, 247 pp. ISBN 80-902896-2-2. info
  • VOTAVA, Miroslav. Lékařská mikrobiologie speciální (Medical microbiology special). 1st ed. Brno: NEPTUN, Březová 18, 637 00 Brno, 2003, 495 pp. ISBN 80-902896-6-5. info
  • VOTAVA, Miroslav, Monika HEROLDOVÁ, Petr ONDROVČÍK, Filip RŮŽIČKA, Vladana WOZNICOVÁ and Ondřej ZAHRADNÍČEK. Lékařská mikrobiologie - protokoly k praktickým cvičením (Medical microbiology - protocoles to practical sessions). 1st ed. Brno: Vydavatelství Neptun, 2004, 94 pp. ISBN 80-902896-7-3. info
  • VOTAVA, Miroslav, Vlastimil OBDRŽÁLEK, Petr ONDROVČÍK, Filip RŮŽIČKA, Ondřej ZAHRADNÍČEK and Vladana WOZNICOVÁ. Lékařská mikrobiologie II. Přehled vyšetřovacích metod v lékařské mikrobiologii (Medical Microbiology II. Survey of Diagnostic Methods in Medical Microbiology). 1st ed. Brno: Masarykova univerzita. Lékařská fakulta, 2000, 309 pp. ISBN 80-210-2272-8. info
  • VOTAVA, Miroslav and Petr ONDROVČÍK. Vybrané kapitoly z klinické mikrobiologie (Selected chapters from clinical microbiology). 1st ed. Brno: Masarykova universita, 1998, 90 pp. ISBN 80-210-1805-4. info
  • GREENWOOD, David. Lékařská mikrobiologie : přehled infekčních onemocnění : patogeneze, imunita, laboratorní diagnostika a epidemiologie. 1. vyd. Praha: Grada Publishing, 1999, 686 s. ISBN 80-7169-365-0. info
  • BEDNÁŘ, Marek. Lékařská mikrobiologie : bakteriologie, virologie, parazitologie. 1. vyd. Praha: Marvil, 1996, 558 s. info
  • Medical microbiology : A guide to microbial infections: Pathogenesis, immunity, laboratory diagnosis and control. Edited by David Greenwood - Richard C. B. Slack - John F. Peutherer - Barer M. 17th ed. Edinburgh: Churchill Livingstone, 2007, 738 s. ISBN 978-0-443-10209-7. info
  • MURRAY, Patrick R., Ken S. ROSENTHAL and George S., et al. KOBAYASHI. Medical microbiology. 4th ed. St. Louis: Mosby, 2002, 826 s. ISBN 0-323-01213-2. info
  • MIMS, Cedric A. Medical microbiology. Updated 3rd ed. Edinburgh: Elsevier, 2004, ix, 660. ISBN 0323035752. info
  • Pro české studium jsou základní tituly 1, 2 a 3, ostatní jsou doplňkové. For English study, title No. 8 is basic, plus protocoles on IS MU. Titles No. 9 and 10 are supplementary.
  • Používejte také / Use also: www.medmicro.info.
Teaching methods
practical training
self-study with e-learning materiasls
Assessment methods
Conditions for credits:
(1) absolving all practicals, with following notes:
- two justified absences or absences approved by teacher are allowed; students are obliged to show that they completed the knowledge (in laboratory reports and in their heads)
- more absences than two require a substitution
- not justified absences are not allowed (EXTRA PAYMENT IS REQUIRED FOR EVENTUAL SUBSTITUTION!!!)
(2) complete laboratory report (signature of teacher is not necessary)
(3) succesfully written credit test, eventually more tests; date of all tests will be declared in time.
Language of instruction
Czech
Follow-Up Courses
Further comments (probably available only in Czech)
Study Materials
Information on completion of the course: Podmínky zápočtu jsou uvedeny v Doplňkových údajích k předmětu
The course is taught annually.
Listed among pre-requisites of other courses
The course is also listed under the following terms Autumn 2000, Autumn 2001, Autumn 2002, Autumn 2003, Autumn 2004, Autumn 2005, Autumn 2006, Autumn 2007, Autumn 2008, Autumn 2010, Autumn 2011, Autumn 2012, Autumn 2013, Autumn 2014, Autumn 2015, Autumn 2016, Autumn 2017, autumn 2018, autumn 2019, autumn 2020, autumn 2021, autumn 2022, autumn 2023, autumn 2024.
  • Enrolment Statistics (Autumn 2009, recent)
  • Permalink: https://is.muni.cz/course/med/autumn2009/VLLM0522c